Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 RNA5SP52-201ENST00000362448 134 ntBASIC4.88□□□□□ -1.63
FOXN1O15353 RNA5SP267-201ENST00000364893 126 ntBASIC4.88□□□□□ -1.63
FOXN1O15353 ESD-201ENST00000378697 1079 ntTSL 5 BASIC4.88□□□□□ -1.63
FOXN1O15353 RNU6-301P-201ENST00000384277 107 ntBASIC4.88□□□□□ -1.63
FOXN1O15353 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
FOXN1O15353 CYCSP45-201ENST00000402289 315 ntBASIC4.88□□□□□ -1.63
FOXN1O15353 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.88□□□□□ -1.63
FOXN1O15353 RN7SKP56-201ENST00000410513 331 ntBASIC4.88□□□□□ -1.63
FOXN1O15353 RNU2-22P-201ENST00000411266 212 ntBASIC4.88□□□□□ -1.63
FOXN1O15353 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC4.88□□□□□ -1.63
FOXN1O15353 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC4.88□□□□□ -1.63
FOXN1O15353 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC4.88□□□□□ -1.63
FOXN1O15353 AL158156.1-201ENST00000422509 473 ntBASIC4.88□□□□□ -1.63
FOXN1O15353 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC4.88□□□□□ -1.63
FOXN1O15353 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC4.88□□□□□ -1.63
FOXN1O15353 RPL23AP35-201ENST00000451906 501 ntBASIC4.88□□□□□ -1.63
FOXN1O15353 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC4.88□□□□□ -1.63
FOXN1O15353 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC4.88□□□□□ -1.63
FOXN1O15353 HNRNPDLP3-201ENST00000456745 380 ntBASIC4.88□□□□□ -1.63
FOXN1O15353 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC4.88□□□□□ -1.63
FOXN1O15353 AC013267.1-201ENST00000458227 267 ntBASIC4.88□□□□□ -1.63
FOXN1O15353 RPL30P9-201ENST00000465586 330 ntBASIC4.88□□□□□ -1.63
FOXN1O15353 MTCYBP17-201ENST00000503579 789 ntBASIC4.88□□□□□ -1.63
FOXN1O15353 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC4.88□□□□□ -1.63
FOXN1O15353 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC4.88□□□□□ -1.63
FOXN1O15353 MTHFD2P4-201ENST00000515074 1025 ntBASIC4.88□□□□□ -1.63
FOXN1O15353 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC4.88□□□□□ -1.63
FOXN1O15353 AC123904.3-201ENST00000547218 814 ntBASIC4.88□□□□□ -1.63
FOXN1O15353 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC4.88□□□□□ -1.63
FOXN1O15353 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC4.88□□□□□ -1.63
FOXN1O15353 AL049634.3-201ENST00000604968 457 ntBASIC4.88□□□□□ -1.63
FOXN1O15353 PART1_1.1-201ENST00000611761 217 ntBASIC4.88□□□□□ -1.63
FOXN1O15353 AC091834.1-201ENST00000614543 472 ntBASIC4.88□□□□□ -1.63
FOXN1O15353 AP004607.9-201ENST00000618202 316 ntBASIC4.88□□□□□ -1.63
FOXN1O15353 AC138649.3-201ENST00000622154 254 ntBASIC4.88□□□□□ -1.63
FOXN1O15353 AC019278.1-201ENST00000623516 479 ntBASIC4.88□□□□□ -1.63
FOXN1O15353 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC4.88□□□□□ -1.63
FOXN1O15353 AL596275.2-204ENST00000641628 552 ntBASIC4.88□□□□□ -1.63
FOXN1O15353 AL596275.2-206ENST00000641957 626 ntBASIC4.88□□□□□ -1.63
FOXN1O15353 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
FOXN1O15353 LINC01355-201ENST00000566551 5444 ntBASIC4.88□□□□□ -1.63
FOXN1O15353 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
FOXN1O15353 AC109315.1-201ENST00000584143 1347 ntBASIC4.88□□□□□ -1.63
FOXN1O15353 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC4.88□□□□□ -1.63
FOXN1O15353 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
FOXN1O15353 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
FOXN1O15353 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
FOXN1O15353 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
FOXN1O15353 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC4.88□□□□□ -1.63
FOXN1O15353 CR383658.2-201ENST00000547576 1525 ntBASIC4.87□□□□□ -1.63
FOXN1O15353 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
FOXN1O15353 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
FOXN1O15353 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
FOXN1O15353 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.87□□□□□ -1.63
FOXN1O15353 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.87□□□□□ -1.63
FOXN1O15353 GNG5P1-201ENST00000255500 204 ntBASIC4.87□□□□□ -1.63
FOXN1O15353 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
FOXN1O15353 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
FOXN1O15353 RNA5SP175-201ENST00000364275 119 ntBASIC4.87□□□□□ -1.63
FOXN1O15353 Y_RNA.302-201ENST00000364997 102 ntBASIC4.87□□□□□ -1.63
FOXN1O15353 Y_RNA.509-201ENST00000384506 99 ntBASIC4.87□□□□□ -1.63
FOXN1O15353 SNORD65.1-201ENST00000390889 71 ntBASIC4.87□□□□□ -1.63
FOXN1O15353 AC007066.1-201ENST00000392902 381 ntBASIC4.87□□□□□ -1.63
FOXN1O15353 AL356057.2-201ENST00000403318 432 ntBASIC4.87□□□□□ -1.63
FOXN1O15353 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.87□□□□□ -1.63
FOXN1O15353 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC4.87□□□□□ -1.63
FOXN1O15353 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC4.87□□□□□ -1.63
FOXN1O15353 RPS25P9-201ENST00000435591 252 ntBASIC4.87□□□□□ -1.63
FOXN1O15353 RPL7P36-201ENST00000444633 681 ntBASIC4.87□□□□□ -1.63
FOXN1O15353 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC4.87□□□□□ -1.63
FOXN1O15353 CYCSP35-201ENST00000451978 304 ntBASIC4.87□□□□□ -1.63
FOXN1O15353 RPS20P21-201ENST00000466859 343 ntBASIC4.87□□□□□ -1.63
FOXN1O15353 AC117522.3-201ENST00000507974 584 ntBASIC4.87□□□□□ -1.63
FOXN1O15353 AC024589.1-201ENST00000512207 263 ntBASIC4.87□□□□□ -1.63
FOXN1O15353 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.87□□□□□ -1.63
FOXN1O15353 RNA5SP73-201ENST00000516744 108 ntBASIC4.87□□□□□ -1.63
FOXN1O15353 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC4.87□□□□□ -1.63
FOXN1O15353 CENPUP1-201ENST00000526649 1202 ntBASIC4.87□□□□□ -1.63
FOXN1O15353 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC4.87□□□□□ -1.63
FOXN1O15353 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
FOXN1O15353 AP002453.2-201ENST00000533503 320 ntBASIC4.87□□□□□ -1.63
FOXN1O15353 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC4.87□□□□□ -1.63
FOXN1O15353 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC4.87□□□□□ -1.63
FOXN1O15353 BPTFP1-201ENST00000579209 492 ntBASIC4.87□□□□□ -1.63
FOXN1O15353 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC4.87□□□□□ -1.63
FOXN1O15353 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
FOXN1O15353 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC4.87□□□□□ -1.63
FOXN1O15353 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
FOXN1O15353 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC4.87□□□□□ -1.63
FOXN1O15353 AC006026.1-201ENST00000444025 1803 ntBASIC4.87□□□□□ -1.63
FOXN1O15353 MAPK10-372ENST00000641954 3413 ntBASIC4.87□□□□□ -1.63
FOXN1O15353 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
FOXN1O15353 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
FOXN1O15353 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
FOXN1O15353 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
FOXN1O15353 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.87□□□□□ -1.63
FOXN1O15353 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.86□□□□□ -1.63
FOXN1O15353 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
FOXN1O15353 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
FOXN1O15353 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms