Protein–RNA interactions for Protein: A0A087WSZ9

TRAV30, T-cell receptor alpha variable 30 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV30A0A087WSZ9 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC2.07□□□□□ -2.08
TRAV30A0A087WSZ9 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
TRAV30A0A087WSZ9 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.06□□□□□ -2.08
TRAV30A0A087WSZ9 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
TRAV30A0A087WSZ9 TAS2R15P-201ENST00000390674 928 ntBASIC2.06□□□□□ -2.08
TRAV30A0A087WSZ9 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC2.06□□□□□ -2.08
TRAV30A0A087WSZ9 AL606495.1-201ENST00000422100 813 ntBASIC2.06□□□□□ -2.08
TRAV30A0A087WSZ9 MORF4L1P7-201ENST00000426038 703 ntBASIC2.06□□□□□ -2.08
TRAV30A0A087WSZ9 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
TRAV30A0A087WSZ9 UBE2V1P6-201ENST00000430840 422 ntBASIC2.06□□□□□ -2.08
TRAV30A0A087WSZ9 RPS7P2-201ENST00000435134 607 ntBASIC2.06□□□□□ -2.08
TRAV30A0A087WSZ9 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC2.06□□□□□ -2.08
TRAV30A0A087WSZ9 RPS12P2-201ENST00000439728 269 ntBASIC2.06□□□□□ -2.08
TRAV30A0A087WSZ9 RSL24D1P3-201ENST00000449255 495 ntBASIC2.06□□□□□ -2.08
TRAV30A0A087WSZ9 NPM1P13-201ENST00000452663 865 ntBASIC2.06□□□□□ -2.08
TRAV30A0A087WSZ9 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC2.06□□□□□ -2.08
TRAV30A0A087WSZ9 AP002345.1-201ENST00000456493 928 ntBASIC2.06□□□□□ -2.08
TRAV30A0A087WSZ9 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC2.06□□□□□ -2.08
TRAV30A0A087WSZ9 AP002371.1-201ENST00000463604 433 ntBASIC2.06□□□□□ -2.08
TRAV30A0A087WSZ9 S100A11P2-201ENST00000467589 312 ntBASIC2.06□□□□□ -2.08
TRAV30A0A087WSZ9 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC2.06□□□□□ -2.08
TRAV30A0A087WSZ9 MRPL42P6-201ENST00000486397 371 ntBASIC2.06□□□□□ -2.08
TRAV30A0A087WSZ9 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
TRAV30A0A087WSZ9 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC2.06□□□□□ -2.08
TRAV30A0A087WSZ9 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC2.06□□□□□ -2.08
TRAV30A0A087WSZ9 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC2.06□□□□□ -2.08
TRAV30A0A087WSZ9 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
TRAV30A0A087WSZ9 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.06□□□□□ -2.08
TRAV30A0A087WSZ9 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC2.06□□□□□ -2.08
TRAV30A0A087WSZ9 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC2.06□□□□□ -2.08
TRAV30A0A087WSZ9 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC2.06□□□□□ -2.08
TRAV30A0A087WSZ9 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC2.06□□□□□ -2.08
TRAV30A0A087WSZ9 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.06□□□□□ -2.08
TRAV30A0A087WSZ9 OR7K1P-201ENST00000546439 926 ntBASIC2.06□□□□□ -2.08
TRAV30A0A087WSZ9 AC008083.2-201ENST00000546707 476 ntBASIC2.06□□□□□ -2.08
TRAV30A0A087WSZ9 AC007954.1-201ENST00000554198 494 ntBASIC2.06□□□□□ -2.08
TRAV30A0A087WSZ9 AC012182.1-201ENST00000570133 895 ntBASIC2.06□□□□□ -2.08
TRAV30A0A087WSZ9 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC2.06□□□□□ -2.08
TRAV30A0A087WSZ9 AC053481.3-201ENST00000577881 843 ntBASIC2.06□□□□□ -2.08
TRAV30A0A087WSZ9 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC2.06□□□□□ -2.08
TRAV30A0A087WSZ9 AC024220.1-201ENST00000603675 484 ntBASIC2.06□□□□□ -2.08
TRAV30A0A087WSZ9 AC007179.3-201ENST00000604976 235 ntBASIC2.06□□□□□ -2.08
TRAV30A0A087WSZ9 AL392112.1-201ENST00000605115 829 ntBASIC2.06□□□□□ -2.08
TRAV30A0A087WSZ9 AC096577.2-201ENST00000611455 153 ntBASIC2.06□□□□□ -2.08
TRAV30A0A087WSZ9 ATP5A1P2-202ENST00000616464 443 ntBASIC2.06□□□□□ -2.08
TRAV30A0A087WSZ9 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC2.06□□□□□ -2.08
TRAV30A0A087WSZ9 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC2.06□□□□□ -2.08
TRAV30A0A087WSZ9 AC109315.1-201ENST00000584143 1347 ntBASIC2.06□□□□□ -2.08
TRAV30A0A087WSZ9 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC2.06□□□□□ -2.08
TRAV30A0A087WSZ9 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
TRAV30A0A087WSZ9 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
TRAV30A0A087WSZ9 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC2.05□□□□□ -2.08
TRAV30A0A087WSZ9 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
TRAV30A0A087WSZ9 RNU6-532P-201ENST00000384318 107 ntBASIC2.05□□□□□ -2.08
TRAV30A0A087WSZ9 RNA5SP210-201ENST00000391034 120 ntBASIC2.05□□□□□ -2.08
TRAV30A0A087WSZ9 RNA5SP171-201ENST00000391071 115 ntBASIC2.05□□□□□ -2.08
TRAV30A0A087WSZ9 AC096533.1-201ENST00000411645 353 ntBASIC2.05□□□□□ -2.08
TRAV30A0A087WSZ9 AC096632.1-201ENST00000427395 310 ntBASIC2.05□□□□□ -2.08
TRAV30A0A087WSZ9 AC073508.1-201ENST00000428866 656 ntBASIC2.05□□□□□ -2.08
TRAV30A0A087WSZ9 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
TRAV30A0A087WSZ9 AL031663.1-201ENST00000437445 219 ntBASIC2.05□□□□□ -2.08
TRAV30A0A087WSZ9 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.05□□□□□ -2.08
TRAV30A0A087WSZ9 AC093156.1-201ENST00000440382 670 ntBASIC2.05□□□□□ -2.08
TRAV30A0A087WSZ9 RPS24P6-201ENST00000452670 400 ntBASIC2.05□□□□□ -2.08
TRAV30A0A087WSZ9 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.05□□□□□ -2.08
TRAV30A0A087WSZ9 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC2.05□□□□□ -2.08
TRAV30A0A087WSZ9 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC2.05□□□□□ -2.08
TRAV30A0A087WSZ9 RPS29P26-201ENST00000477483 171 ntBASIC2.05□□□□□ -2.08
TRAV30A0A087WSZ9 HMGB1P22-201ENST00000505315 124 ntBASIC2.05□□□□□ -2.08
TRAV30A0A087WSZ9 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.05□□□□□ -2.08
TRAV30A0A087WSZ9 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
TRAV30A0A087WSZ9 AC105914.1-201ENST00000511798 226 ntBASIC2.05□□□□□ -2.08
TRAV30A0A087WSZ9 AC096725.1-201ENST00000514266 313 ntBASIC2.05□□□□□ -2.08
TRAV30A0A087WSZ9 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC2.05□□□□□ -2.08
TRAV30A0A087WSZ9 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC2.05□□□□□ -2.08
TRAV30A0A087WSZ9 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC2.05□□□□□ -2.08
TRAV30A0A087WSZ9 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC2.05□□□□□ -2.08
TRAV30A0A087WSZ9 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC2.05□□□□□ -2.08
TRAV30A0A087WSZ9 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.05□□□□□ -2.08
TRAV30A0A087WSZ9 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC2.05□□□□□ -2.08
TRAV30A0A087WSZ9 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
TRAV30A0A087WSZ9 AC012321.1-201ENST00000561622 1588 ntBASIC2.05□□□□□ -2.08
TRAV30A0A087WSZ9 ZNF33BP1-201ENST00000452497 1834 ntBASIC2.05□□□□□ -2.08
TRAV30A0A087WSZ9 AL355596.1-201ENST00000565399 3996 ntBASIC2.05□□□□□ -2.08
TRAV30A0A087WSZ9 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.04□□□□□ -2.08
TRAV30A0A087WSZ9 AL512646.1-201ENST00000269395 1077 ntBASIC2.04□□□□□ -2.08
TRAV30A0A087WSZ9 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.04□□□□□ -2.08
TRAV30A0A087WSZ9 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
TRAV30A0A087WSZ9 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.04□□□□□ -2.08
TRAV30A0A087WSZ9 MIR142-201ENST00000384835 87 ntBASIC2.04□□□□□ -2.08
TRAV30A0A087WSZ9 UQCRFS1P3-201ENST00000407697 385 ntBASIC2.04□□□□□ -2.08
TRAV30A0A087WSZ9 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC2.04□□□□□ -2.08
TRAV30A0A087WSZ9 RPLP0P7-201ENST00000416050 667 ntBASIC2.04□□□□□ -2.08
TRAV30A0A087WSZ9 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.04□□□□□ -2.08
TRAV30A0A087WSZ9 RABEPKP1-201ENST00000440529 1026 ntBASIC2.04□□□□□ -2.08
TRAV30A0A087WSZ9 AC011816.1-201ENST00000441346 546 ntBASIC2.04□□□□□ -2.08
TRAV30A0A087WSZ9 IGKV1OR-3-201ENST00000446944 348 ntBASIC2.04□□□□□ -2.08
TRAV30A0A087WSZ9 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC2.04□□□□□ -2.08
TRAV30A0A087WSZ9 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC2.04□□□□□ -2.08
TRAV30A0A087WSZ9 AL031183.1-201ENST00000457667 207 ntBASIC2.04□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 118.2 ms