Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 AP000907.4-201ENST00000604143 237 ntBASIC5.09□□□□□ -1.59
CTDP1Q9Y5B0 AL161729.4-201ENST00000604650 476 ntBASIC5.09□□□□□ -1.59
CTDP1Q9Y5B0 AP001506.1-201ENST00000615444 211 ntBASIC5.09□□□□□ -1.59
CTDP1Q9Y5B0 AC099669.2-201ENST00000616549 437 ntBASIC5.09□□□□□ -1.59
CTDP1Q9Y5B0 AC006338.1-201ENST00000618453 749 ntBASIC5.09□□□□□ -1.59
CTDP1Q9Y5B0 AC015871.5-202ENST00000623252 701 ntBASIC5.09□□□□□ -1.59
CTDP1Q9Y5B0 FTO-223ENST00000640179 210 ntTSL 5 BASIC5.09□□□□□ -1.59
CTDP1Q9Y5B0 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
CTDP1Q9Y5B0 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC5.09□□□□□ -1.59
CTDP1Q9Y5B0 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
CTDP1Q9Y5B0 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CTDP1Q9Y5B0 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC5.09□□□□□ -1.6
CTDP1Q9Y5B0 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC5.09□□□□□ -1.6
CTDP1Q9Y5B0 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.6
CTDP1Q9Y5B0 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC5.09□□□□□ -1.6
CTDP1Q9Y5B0 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CTDP1Q9Y5B0 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CTDP1Q9Y5B0 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC5.08□□□□□ -1.6
CTDP1Q9Y5B0 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CTDP1Q9Y5B0 SNRPEP3-201ENST00000338402 276 ntBASIC5.08□□□□□ -1.6
CTDP1Q9Y5B0 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CTDP1Q9Y5B0 RNA5SP239-201ENST00000410218 129 ntBASIC5.08□□□□□ -1.6
CTDP1Q9Y5B0 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC5.08□□□□□ -1.6
CTDP1Q9Y5B0 AC234782.4-201ENST00000417646 1048 ntBASIC5.08□□□□□ -1.6
CTDP1Q9Y5B0 MTCYBP24-201ENST00000420387 1106 ntBASIC5.08□□□□□ -1.6
CTDP1Q9Y5B0 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC5.08□□□□□ -1.6
CTDP1Q9Y5B0 TRIM60P10Y-201ENST00000425589 751 ntBASIC5.08□□□□□ -1.6
CTDP1Q9Y5B0 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC5.08□□□□□ -1.6
CTDP1Q9Y5B0 TRIM60P8Y-201ENST00000436338 762 ntBASIC5.08□□□□□ -1.6
CTDP1Q9Y5B0 AC092427.1-201ENST00000439177 601 ntBASIC5.08□□□□□ -1.6
CTDP1Q9Y5B0 RPS26P2-201ENST00000440331 348 ntBASIC5.08□□□□□ -1.6
CTDP1Q9Y5B0 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC5.08□□□□□ -1.6
CTDP1Q9Y5B0 RPL39P6-201ENST00000448289 150 ntBASIC5.08□□□□□ -1.6
CTDP1Q9Y5B0 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC5.08□□□□□ -1.6
CTDP1Q9Y5B0 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC5.08□□□□□ -1.6
CTDP1Q9Y5B0 AC013267.1-201ENST00000458227 267 ntBASIC5.08□□□□□ -1.6
CTDP1Q9Y5B0 MEMO1P3-201ENST00000459811 302 ntBASIC5.08□□□□□ -1.6
CTDP1Q9Y5B0 AC097493.1-201ENST00000463958 372 ntBASIC5.08□□□□□ -1.6
CTDP1Q9Y5B0 RPL7P19-201ENST00000469948 618 ntBASIC5.08□□□□□ -1.6
CTDP1Q9Y5B0 AC041039.1-201ENST00000485656 536 ntBASIC5.08□□□□□ -1.6
CTDP1Q9Y5B0 AC114981.1-201ENST00000503897 678 ntBASIC5.08□□□□□ -1.6
CTDP1Q9Y5B0 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC5.08□□□□□ -1.6
CTDP1Q9Y5B0 SNORA18.6-201ENST00000516792 115 ntBASIC5.08□□□□□ -1.6
CTDP1Q9Y5B0 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC5.08□□□□□ -1.6
CTDP1Q9Y5B0 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC5.08□□□□□ -1.6
CTDP1Q9Y5B0 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC5.08□□□□□ -1.6
CTDP1Q9Y5B0 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC5.08□□□□□ -1.6
CTDP1Q9Y5B0 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC5.08□□□□□ -1.6
CTDP1Q9Y5B0 AC013828.2-201ENST00000532487 235 ntBASIC5.08□□□□□ -1.6
CTDP1Q9Y5B0 AC068587.4-201ENST00000533893 186 ntBASIC5.08□□□□□ -1.6
CTDP1Q9Y5B0 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC5.08□□□□□ -1.6
CTDP1Q9Y5B0 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC5.08□□□□□ -1.6
CTDP1Q9Y5B0 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC5.08□□□□□ -1.6
CTDP1Q9Y5B0 CFL2-206ENST00000556161 546 ntTSL 4 BASIC5.08□□□□□ -1.6
CTDP1Q9Y5B0 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC5.08□□□□□ -1.6
CTDP1Q9Y5B0 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC5.08□□□□□ -1.6
CTDP1Q9Y5B0 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC5.08□□□□□ -1.6
CTDP1Q9Y5B0 AC112191.3-201ENST00000604371 277 ntBASIC5.08□□□□□ -1.6
CTDP1Q9Y5B0 AC092954.2-201ENST00000609103 430 ntBASIC5.08□□□□□ -1.6
CTDP1Q9Y5B0 AP001521.1-201ENST00000609150 300 ntBASIC5.08□□□□□ -1.6
CTDP1Q9Y5B0 AL592295.2-201ENST00000612578 206 ntBASIC5.08□□□□□ -1.6
CTDP1Q9Y5B0 AC243773.3-201ENST00000613270 256 ntBASIC5.08□□□□□ -1.6
CTDP1Q9Y5B0 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC5.08□□□□□ -1.6
CTDP1Q9Y5B0 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CTDP1Q9Y5B0 MIR6863-201ENST00000636112 90 ntBASIC5.08□□□□□ -1.6
CTDP1Q9Y5B0 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC5.08□□□□□ -1.6
CTDP1Q9Y5B0 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
CTDP1Q9Y5B0 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CTDP1Q9Y5B0 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC5.08□□□□□ -1.6
CTDP1Q9Y5B0 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC5.07□□□□□ -1.6
CTDP1Q9Y5B0 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC5.07□□□□□ -1.6
CTDP1Q9Y5B0 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC5.07□□□□□ -1.6
CTDP1Q9Y5B0 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
CTDP1Q9Y5B0 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CTDP1Q9Y5B0 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
CTDP1Q9Y5B0 RNU1-94P-201ENST00000362627 173 ntBASIC5.07□□□□□ -1.6
CTDP1Q9Y5B0 RNA5SP175-201ENST00000364275 119 ntBASIC5.07□□□□□ -1.6
CTDP1Q9Y5B0 RNU1-132P-201ENST00000364300 164 ntBASIC5.07□□□□□ -1.6
CTDP1Q9Y5B0 U3.15-201ENST00000365398 212 ntBASIC5.07□□□□□ -1.6
CTDP1Q9Y5B0 RNU1-63P-201ENST00000383902 164 ntBASIC5.07□□□□□ -1.6
CTDP1Q9Y5B0 LAP3P1-201ENST00000403648 294 ntBASIC5.07□□□□□ -1.6
CTDP1Q9Y5B0 CCNG1P1-201ENST00000406783 885 ntBASIC5.07□□□□□ -1.6
CTDP1Q9Y5B0 VN1R8P-201ENST00000407739 893 ntBASIC5.07□□□□□ -1.6
CTDP1Q9Y5B0 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC5.07□□□□□ -1.6
CTDP1Q9Y5B0 C1DP2-201ENST00000418167 426 ntBASIC5.07□□□□□ -1.6
CTDP1Q9Y5B0 RPL31P45-201ENST00000419532 356 ntBASIC5.07□□□□□ -1.6
CTDP1Q9Y5B0 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC5.07□□□□□ -1.6
CTDP1Q9Y5B0 AC233981.1-201ENST00000423224 461 ntBASIC5.07□□□□□ -1.6
CTDP1Q9Y5B0 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC5.07□□□□□ -1.6
CTDP1Q9Y5B0 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC5.07□□□□□ -1.6
CTDP1Q9Y5B0 BTF3P10-201ENST00000433415 495 ntBASIC5.07□□□□□ -1.6
CTDP1Q9Y5B0 AC098614.3-201ENST00000438957 440 ntBASIC5.07□□□□□ -1.6
CTDP1Q9Y5B0 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC5.07□□□□□ -1.6
CTDP1Q9Y5B0 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC5.07□□□□□ -1.6
CTDP1Q9Y5B0 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC5.07□□□□□ -1.6
CTDP1Q9Y5B0 ELOCP23-201ENST00000452014 332 ntBASIC5.07□□□□□ -1.6
CTDP1Q9Y5B0 AC133473.1-201ENST00000455173 299 ntBASIC5.07□□□□□ -1.6
CTDP1Q9Y5B0 RPL21P71-201ENST00000465598 459 ntBASIC5.07□□□□□ -1.6
CTDP1Q9Y5B0 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC5.07□□□□□ -1.6
CTDP1Q9Y5B0 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 94.3 ms