Protein–RNA interactions for Protein: Q9UBR4

LHX3, LIM/homeobox protein Lhx3, humanhuman

Predictions only

Length 397 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX3Q9UBR4 RPL7P44-201ENST00000424827 742 ntBASIC3.38□□□□□ -1.87
LHX3Q9UBR4 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.38□□□□□ -1.87
LHX3Q9UBR4 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC3.38□□□□□ -1.87
LHX3Q9UBR4 AC005326.1-201ENST00000429197 123 ntBASIC3.38□□□□□ -1.87
LHX3Q9UBR4 ATP5C1P1-201ENST00000441945 895 ntBASIC3.38□□□□□ -1.87
LHX3Q9UBR4 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
LHX3Q9UBR4 VN1R10P-201ENST00000447106 875 ntBASIC3.38□□□□□ -1.87
LHX3Q9UBR4 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC3.38□□□□□ -1.87
LHX3Q9UBR4 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.38□□□□□ -1.87
LHX3Q9UBR4 MRPS31P2-201ENST00000451581 518 ntBASIC3.38□□□□□ -1.87
LHX3Q9UBR4 RPL23AP67-201ENST00000465341 474 ntBASIC3.38□□□□□ -1.87
LHX3Q9UBR4 AC104164.3-201ENST00000467363 1258 ntBASIC3.38□□□□□ -1.87
LHX3Q9UBR4 AC020893.1-201ENST00000502452 580 ntBASIC3.38□□□□□ -1.87
LHX3Q9UBR4 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC3.38□□□□□ -1.87
LHX3Q9UBR4 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC3.38□□□□□ -1.87
LHX3Q9UBR4 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.38□□□□□ -1.87
LHX3Q9UBR4 AC109635.4-202ENST00000531666 412 ntBASIC3.38□□□□□ -1.87
LHX3Q9UBR4 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.38□□□□□ -1.87
LHX3Q9UBR4 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC3.38□□□□□ -1.87
LHX3Q9UBR4 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC3.38□□□□□ -1.87
LHX3Q9UBR4 MIR3944-201ENST00000581277 108 ntBASIC3.38□□□□□ -1.87
LHX3Q9UBR4 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.38□□□□□ -1.87
LHX3Q9UBR4 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC3.38□□□□□ -1.87
LHX3Q9UBR4 AC012468.1-201ENST00000604888 430 ntBASIC3.38□□□□□ -1.87
LHX3Q9UBR4 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC3.38□□□□□ -1.87
LHX3Q9UBR4 AL158163.2-201ENST00000619110 700 ntBASIC3.38□□□□□ -1.87
LHX3Q9UBR4 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC3.38□□□□□ -1.87
LHX3Q9UBR4 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC3.38□□□□□ -1.87
LHX3Q9UBR4 MFF-206ENST00000392059 1710 ntTSL 5 BASIC3.38□□□□□ -1.87
LHX3Q9UBR4 AP001350.1-201ENST00000601906 1524 ntBASIC3.38□□□□□ -1.87
LHX3Q9UBR4 Z83843.1-201ENST00000604070 3685 ntBASIC3.38□□□□□ -1.87
LHX3Q9UBR4 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.38□□□□□ -1.87
LHX3Q9UBR4 AC017071.1-201ENST00000564407 2204 ntBASIC3.38□□□□□ -1.87
LHX3Q9UBR4 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.38□□□□□ -1.87
LHX3Q9UBR4 TNPO1P3-201ENST00000436471 2662 ntBASIC3.37□□□□□ -1.87
LHX3Q9UBR4 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.37□□□□□ -1.87
LHX3Q9UBR4 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
LHX3Q9UBR4 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
LHX3Q9UBR4 AC093908.1-201ENST00000623125 8092 ntBASIC3.37□□□□□ -1.87
LHX3Q9UBR4 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
LHX3Q9UBR4 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
LHX3Q9UBR4 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
LHX3Q9UBR4 RNU1-70P-201ENST00000362618 164 ntBASIC3.37□□□□□ -1.87
LHX3Q9UBR4 HSPE1P26-201ENST00000405341 275 ntBASIC3.37□□□□□ -1.87
LHX3Q9UBR4 RPL30P2-201ENST00000414021 291 ntBASIC3.37□□□□□ -1.87
LHX3Q9UBR4 AL161449.1-201ENST00000414531 1199 ntBASIC3.37□□□□□ -1.87
LHX3Q9UBR4 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.37□□□□□ -1.87
LHX3Q9UBR4 AIMP1P1-201ENST00000418670 937 ntBASIC3.37□□□□□ -1.87
LHX3Q9UBR4 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC3.37□□□□□ -1.87
LHX3Q9UBR4 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.37□□□□□ -1.87
LHX3Q9UBR4 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC3.37□□□□□ -1.87
LHX3Q9UBR4 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.37□□□□□ -1.87
LHX3Q9UBR4 RN7SL601P-201ENST00000471221 293 ntBASIC3.37□□□□□ -1.87
LHX3Q9UBR4 AC021205.2-201ENST00000480069 347 ntBASIC3.37□□□□□ -1.87
LHX3Q9UBR4 RPL23AP44-201ENST00000482216 473 ntBASIC3.37□□□□□ -1.87
LHX3Q9UBR4 OR4G11P-201ENST00000492842 939 ntBASIC3.37□□□□□ -1.87
LHX3Q9UBR4 AP001086.1-201ENST00000494882 321 ntBASIC3.37□□□□□ -1.87
LHX3Q9UBR4 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC3.37□□□□□ -1.87
LHX3Q9UBR4 AC113420.1-201ENST00000507903 571 ntBASIC3.37□□□□□ -1.87
LHX3Q9UBR4 AC021146.1-201ENST00000511202 716 ntBASIC3.37□□□□□ -1.87
LHX3Q9UBR4 APOOP4-201ENST00000513530 597 ntBASIC3.37□□□□□ -1.87
LHX3Q9UBR4 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC3.37□□□□□ -1.87
LHX3Q9UBR4 RNU6-1225P-201ENST00000516336 65 ntBASIC3.37□□□□□ -1.87
LHX3Q9UBR4 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC3.37□□□□□ -1.87
LHX3Q9UBR4 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC3.37□□□□□ -1.87
LHX3Q9UBR4 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC3.37□□□□□ -1.87
LHX3Q9UBR4 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC3.37□□□□□ -1.87
LHX3Q9UBR4 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.37□□□□□ -1.87
LHX3Q9UBR4 AL139174.1-201ENST00000531489 886 ntBASIC3.37□□□□□ -1.87
LHX3Q9UBR4 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC3.37□□□□□ -1.87
LHX3Q9UBR4 AL121603.1-201ENST00000553815 142 ntBASIC3.37□□□□□ -1.87
LHX3Q9UBR4 TGIF1P1-201ENST00000558095 802 ntBASIC3.37□□□□□ -1.87
LHX3Q9UBR4 MTCYBP23-201ENST00000558717 1102 ntBASIC3.37□□□□□ -1.87
LHX3Q9UBR4 RPL21P12-201ENST00000559810 515 ntBASIC3.37□□□□□ -1.87
LHX3Q9UBR4 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.37□□□□□ -1.87
LHX3Q9UBR4 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC3.37□□□□□ -1.87
LHX3Q9UBR4 MIR4509-3-201ENST00000578671 94 ntBASIC3.37□□□□□ -1.87
LHX3Q9UBR4 MIR4509-2-201ENST00000583920 94 ntBASIC3.37□□□□□ -1.87
LHX3Q9UBR4 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC3.37□□□□□ -1.87
LHX3Q9UBR4 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC3.37□□□□□ -1.87
LHX3Q9UBR4 AC091057.3-201ENST00000602684 733 ntBASIC3.37□□□□□ -1.87
LHX3Q9UBR4 AC021749.1-201ENST00000604322 607 ntBASIC3.37□□□□□ -1.87
LHX3Q9UBR4 AL162713.1-201ENST00000604480 262 ntBASIC3.37□□□□□ -1.87
LHX3Q9UBR4 CYCSP41-201ENST00000616920 296 ntBASIC3.37□□□□□ -1.87
LHX3Q9UBR4 MIR4509-1-201ENST00000618224 94 ntBASIC3.37□□□□□ -1.87
LHX3Q9UBR4 AL121895.2-201ENST00000619558 447 ntBASIC3.37□□□□□ -1.87
LHX3Q9UBR4 AL356321.1-201ENST00000621360 228 ntBASIC3.37□□□□□ -1.87
LHX3Q9UBR4 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.37□□□□□ -1.87
LHX3Q9UBR4 AC110801.1-201ENST00000623590 212 ntBASIC3.37□□□□□ -1.87
LHX3Q9UBR4 AC040168.1-201ENST00000623594 991 ntBASIC3.37□□□□□ -1.87
LHX3Q9UBR4 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC3.37□□□□□ -1.87
LHX3Q9UBR4 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC3.37□□□□□ -1.87
LHX3Q9UBR4 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.37□□□□□ -1.87
LHX3Q9UBR4 MTCO1P23-201ENST00000415223 1526 ntBASIC3.37□□□□□ -1.87
LHX3Q9UBR4 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
LHX3Q9UBR4 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.37□□□□□ -1.87
LHX3Q9UBR4 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.37□□□□□ -1.87
LHX3Q9UBR4 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.37□□□□□ -1.87
LHX3Q9UBR4 AL133383.2-201ENST00000622958 2336 ntBASIC3.36□□□□□ -1.87
LHX3Q9UBR4 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 107.1 ms