Protein–RNA interactions for Protein: Q9NXB0

MKS1, Meckel syndrome type 1 protein, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1Q9NXB0 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC4.63□□□□□ -1.67
MKS1Q9NXB0 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC4.63□□□□□ -1.67
MKS1Q9NXB0 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC4.63□□□□□ -1.67
MKS1Q9NXB0 MTCYBP5-201ENST00000423752 1135 ntBASIC4.63□□□□□ -1.67
MKS1Q9NXB0 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC4.63□□□□□ -1.67
MKS1Q9NXB0 AC133104.1-201ENST00000429100 218 ntBASIC4.63□□□□□ -1.67
MKS1Q9NXB0 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC4.63□□□□□ -1.67
MKS1Q9NXB0 OR4K11P-201ENST00000431829 904 ntBASIC4.63□□□□□ -1.67
MKS1Q9NXB0 TIMM9P1-201ENST00000436122 256 ntBASIC4.63□□□□□ -1.67
MKS1Q9NXB0 AL451074.3-201ENST00000437709 472 ntBASIC4.63□□□□□ -1.67
MKS1Q9NXB0 USP9YP15-201ENST00000442391 422 ntBASIC4.63□□□□□ -1.67
MKS1Q9NXB0 PSPHP1-201ENST00000450062 261 ntBASIC4.63□□□□□ -1.67
MKS1Q9NXB0 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC4.63□□□□□ -1.67
MKS1Q9NXB0 AC079168.2-201ENST00000453977 416 ntBASIC4.63□□□□□ -1.67
MKS1Q9NXB0 SNRPGP5-201ENST00000456003 220 ntBASIC4.63□□□□□ -1.67
MKS1Q9NXB0 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC4.63□□□□□ -1.67
MKS1Q9NXB0 BX284632.1-201ENST00000478218 541 ntBASIC4.63□□□□□ -1.67
MKS1Q9NXB0 AC007686.1-201ENST00000488511 463 ntBASIC4.63□□□□□ -1.67
MKS1Q9NXB0 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
MKS1Q9NXB0 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC4.63□□□□□ -1.67
MKS1Q9NXB0 AK3P4-201ENST00000504283 583 ntBASIC4.63□□□□□ -1.67
MKS1Q9NXB0 AC020593.1-201ENST00000507399 299 ntBASIC4.63□□□□□ -1.67
MKS1Q9NXB0 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.63□□□□□ -1.67
MKS1Q9NXB0 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.63□□□□□ -1.67
MKS1Q9NXB0 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC4.63□□□□□ -1.67
MKS1Q9NXB0 AC011352.1-201ENST00000512300 793 ntBASIC4.63□□□□□ -1.67
MKS1Q9NXB0 RNU6-798P-201ENST00000516912 103 ntBASIC4.63□□□□□ -1.67
MKS1Q9NXB0 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
MKS1Q9NXB0 SMILR-201ENST00000533992 553 ntTSL 4 BASIC4.63□□□□□ -1.67
MKS1Q9NXB0 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.63□□□□□ -1.67
MKS1Q9NXB0 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC4.63□□□□□ -1.67
MKS1Q9NXB0 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC4.63□□□□□ -1.67
MKS1Q9NXB0 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC4.63□□□□□ -1.67
MKS1Q9NXB0 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
MKS1Q9NXB0 AC105129.1-201ENST00000560250 297 ntBASIC4.63□□□□□ -1.67
MKS1Q9NXB0 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC4.63□□□□□ -1.67
MKS1Q9NXB0 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC4.63□□□□□ -1.67
MKS1Q9NXB0 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC4.63□□□□□ -1.67
MKS1Q9NXB0 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC4.63□□□□□ -1.67
MKS1Q9NXB0 AC008966.2-201ENST00000606157 453 ntBASIC4.63□□□□□ -1.67
MKS1Q9NXB0 MIR98-201ENST00000606724 119 ntBASIC4.63□□□□□ -1.67
MKS1Q9NXB0 AL158211.4-201ENST00000606988 584 ntBASIC4.63□□□□□ -1.67
MKS1Q9NXB0 AP002360.3-201ENST00000607673 710 ntBASIC4.63□□□□□ -1.67
MKS1Q9NXB0 AC007038.2-201ENST00000608095 740 ntBASIC4.63□□□□□ -1.67
MKS1Q9NXB0 TUG1_1.1-201ENST00000610654 145 ntBASIC4.63□□□□□ -1.67
MKS1Q9NXB0 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
MKS1Q9NXB0 CR381653.2-201ENST00000624041 768 ntBASIC4.63□□□□□ -1.67
MKS1Q9NXB0 MIR6863-201ENST00000636112 90 ntBASIC4.63□□□□□ -1.67
MKS1Q9NXB0 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
MKS1Q9NXB0 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
MKS1Q9NXB0 AL136164.3-201ENST00000624429 3978 ntBASIC4.63□□□□□ -1.67
MKS1Q9NXB0 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.63□□□□□ -1.67
MKS1Q9NXB0 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
MKS1Q9NXB0 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC4.63□□□□□ -1.67
MKS1Q9NXB0 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
MKS1Q9NXB0 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.62□□□□□ -1.67
MKS1Q9NXB0 MTCO1P9-201ENST00000505577 1534 ntBASIC4.62□□□□□ -1.67
MKS1Q9NXB0 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.62□□□□□ -1.67
MKS1Q9NXB0 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.62□□□□□ -1.67
MKS1Q9NXB0 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
MKS1Q9NXB0 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
MKS1Q9NXB0 AC125257.1-201ENST00000560400 2930 ntBASIC4.62□□□□□ -1.67
MKS1Q9NXB0 RNA5SP22-201ENST00000365393 109 ntBASIC4.62□□□□□ -1.67
MKS1Q9NXB0 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
MKS1Q9NXB0 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC4.62□□□□□ -1.67
MKS1Q9NXB0 RPS15AP12-201ENST00000419498 388 ntBASIC4.62□□□□□ -1.67
MKS1Q9NXB0 CYP4F29P-201ENST00000420685 446 ntBASIC4.62□□□□□ -1.67
MKS1Q9NXB0 BEND7P1-201ENST00000422058 457 ntBASIC4.62□□□□□ -1.67
MKS1Q9NXB0 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC4.62□□□□□ -1.67
MKS1Q9NXB0 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC4.62□□□□□ -1.67
MKS1Q9NXB0 FABP3P2-201ENST00000453169 399 ntBASIC4.62□□□□□ -1.67
MKS1Q9NXB0 RPS5P7-201ENST00000456664 608 ntBASIC4.62□□□□□ -1.67
MKS1Q9NXB0 AC140172.1-201ENST00000502928 141 ntBASIC4.62□□□□□ -1.67
MKS1Q9NXB0 AC091868.1-201ENST00000508746 304 ntBASIC4.62□□□□□ -1.67
MKS1Q9NXB0 AC010493.1-201ENST00000513479 292 ntBASIC4.62□□□□□ -1.67
MKS1Q9NXB0 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC4.62□□□□□ -1.67
MKS1Q9NXB0 AC103783.1-201ENST00000520506 373 ntBASIC4.62□□□□□ -1.67
MKS1Q9NXB0 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC4.62□□□□□ -1.67
MKS1Q9NXB0 AL133271.1-201ENST00000538229 291 ntBASIC4.62□□□□□ -1.67
MKS1Q9NXB0 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC4.62□□□□□ -1.67
MKS1Q9NXB0 AC069240.1-201ENST00000548774 375 ntBASIC4.62□□□□□ -1.67
MKS1Q9NXB0 ARL1-211ENST00000551828 776 ntTSL 5 BASIC4.62□□□□□ -1.67
MKS1Q9NXB0 AC126177.3-201ENST00000551839 688 ntBASIC4.62□□□□□ -1.67
MKS1Q9NXB0 AL845331.3-202ENST00000562856 261 ntBASIC4.62□□□□□ -1.67
MKS1Q9NXB0 OR4K8P-201ENST00000578842 1048 ntBASIC4.62□□□□□ -1.67
MKS1Q9NXB0 AP001429.1-201ENST00000602568 530 ntBASIC4.62□□□□□ -1.67
MKS1Q9NXB0 RPL26P30-202ENST00000602923 645 ntBASIC4.62□□□□□ -1.67
MKS1Q9NXB0 AC119501.1-201ENST00000603646 475 ntBASIC4.62□□□□□ -1.67
MKS1Q9NXB0 AC010201.1-201ENST00000605051 540 ntBASIC4.62□□□□□ -1.67
MKS1Q9NXB0 AC004908.2-201ENST00000609090 574 ntBASIC4.62□□□□□ -1.67
MKS1Q9NXB0 EIF3FP1-201ENST00000613970 806 ntBASIC4.62□□□□□ -1.67
MKS1Q9NXB0 uc_338.12-201ENST00000616344 181 ntBASIC4.62□□□□□ -1.67
MKS1Q9NXB0 AL157786.1-207ENST00000627771 695 ntBASIC4.62□□□□□ -1.67
MKS1Q9NXB0 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC4.62□□□□□ -1.67
MKS1Q9NXB0 AC244258.1-201ENST00000637553 1071 ntBASIC4.62□□□□□ -1.67
MKS1Q9NXB0 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
MKS1Q9NXB0 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC4.62□□□□□ -1.67
MKS1Q9NXB0 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.62□□□□□ -1.67
MKS1Q9NXB0 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
MKS1Q9NXB0 OSBPL9P4-201ENST00000371707 1800 ntBASIC4.62□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms