Protein–RNA interactions for Protein: Q96MX0

CMTM3, CKLF-like MARVEL transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3Q96MX0 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
CMTM3Q96MX0 ESD-201ENST00000378697 1079 ntTSL 5 BASIC3.71□□□□□ -1.82
CMTM3Q96MX0 SNORD116-8-201ENST00000384365 95 ntBASIC3.71□□□□□ -1.82
CMTM3Q96MX0 SNORA37-201ENST00000384504 129 ntBASIC3.71□□□□□ -1.82
CMTM3Q96MX0 RNU6-114P-201ENST00000384704 105 ntBASIC3.71□□□□□ -1.82
CMTM3Q96MX0 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
CMTM3Q96MX0 AC025750.1-201ENST00000399891 379 ntBASIC3.71□□□□□ -1.82
CMTM3Q96MX0 SPTLC1P2-201ENST00000407089 121 ntBASIC3.71□□□□□ -1.82
CMTM3Q96MX0 MIR1179-201ENST00000408703 91 ntBASIC3.71□□□□□ -1.82
CMTM3Q96MX0 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC3.71□□□□□ -1.82
CMTM3Q96MX0 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC3.71□□□□□ -1.82
CMTM3Q96MX0 HSFY4P-201ENST00000415994 1181 ntBASIC3.71□□□□□ -1.82
CMTM3Q96MX0 Z99497.1-201ENST00000421282 135 ntBASIC3.71□□□□□ -1.82
CMTM3Q96MX0 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC3.71□□□□□ -1.82
CMTM3Q96MX0 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC3.71□□□□□ -1.82
CMTM3Q96MX0 AL512286.1-201ENST00000439244 400 ntBASIC3.71□□□□□ -1.82
CMTM3Q96MX0 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC3.71□□□□□ -1.82
CMTM3Q96MX0 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC3.71□□□□□ -1.82
CMTM3Q96MX0 RPS17P13-201ENST00000448974 407 ntBASIC3.71□□□□□ -1.82
CMTM3Q96MX0 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC3.71□□□□□ -1.82
CMTM3Q96MX0 HMGN2P16-201ENST00000456802 261 ntBASIC3.71□□□□□ -1.82
CMTM3Q96MX0 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.71□□□□□ -1.82
CMTM3Q96MX0 RPL32P9-201ENST00000487963 407 ntBASIC3.71□□□□□ -1.82
CMTM3Q96MX0 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC3.71□□□□□ -1.82
CMTM3Q96MX0 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC3.71□□□□□ -1.82
CMTM3Q96MX0 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC3.71□□□□□ -1.82
CMTM3Q96MX0 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.71□□□□□ -1.82
CMTM3Q96MX0 IGKV2-38-201ENST00000517443 247 ntBASIC3.71□□□□□ -1.82
CMTM3Q96MX0 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC3.71□□□□□ -1.82
CMTM3Q96MX0 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC3.71□□□□□ -1.82
CMTM3Q96MX0 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC3.71□□□□□ -1.82
CMTM3Q96MX0 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC3.71□□□□□ -1.82
CMTM3Q96MX0 AC008033.2-201ENST00000542626 177 ntBASIC3.71□□□□□ -1.82
CMTM3Q96MX0 PCNPP1-201ENST00000552501 511 ntBASIC3.71□□□□□ -1.82
CMTM3Q96MX0 PCMTD1P2-201ENST00000565017 355 ntBASIC3.71□□□□□ -1.82
CMTM3Q96MX0 AC011260.1-201ENST00000578420 472 ntBASIC3.71□□□□□ -1.82
CMTM3Q96MX0 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC3.71□□□□□ -1.82
CMTM3Q96MX0 MIR4307-201ENST00000582802 84 ntBASIC3.71□□□□□ -1.82
CMTM3Q96MX0 AP001429.1-201ENST00000602568 530 ntBASIC3.71□□□□□ -1.82
CMTM3Q96MX0 AC092653.1-201ENST00000608509 531 ntBASIC3.71□□□□□ -1.82
CMTM3Q96MX0 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CMTM3Q96MX0 AC092628.2-201ENST00000622492 339 ntBASIC3.71□□□□□ -1.82
CMTM3Q96MX0 AC079597.1-201ENST00000624306 508 ntBASIC3.71□□□□□ -1.82
CMTM3Q96MX0 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.71□□□□□ -1.82
CMTM3Q96MX0 WDR75-207ENST00000631047 270 ntTSL 5 BASIC3.71□□□□□ -1.82
CMTM3Q96MX0 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.71□□□□□ -1.82
CMTM3Q96MX0 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
CMTM3Q96MX0 ZNF962P-201ENST00000443465 3140 ntBASIC3.71□□□□□ -1.82
CMTM3Q96MX0 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
CMTM3Q96MX0 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
CMTM3Q96MX0 AC009902.3-201ENST00000606235 2172 ntBASIC3.7□□□□□ -1.82
CMTM3Q96MX0 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.7□□□□□ -1.82
CMTM3Q96MX0 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CMTM3Q96MX0 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC3.7□□□□□ -1.82
CMTM3Q96MX0 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
CMTM3Q96MX0 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.7□□□□□ -1.82
CMTM3Q96MX0 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC3.7□□□□□ -1.82
CMTM3Q96MX0 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC3.7□□□□□ -1.82
CMTM3Q96MX0 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
CMTM3Q96MX0 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CMTM3Q96MX0 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
CMTM3Q96MX0 DEFB109C-201ENST00000382575 264 ntBASIC3.7□□□□□ -1.82
CMTM3Q96MX0 DEFB109B-201ENST00000382656 264 ntBASIC3.7□□□□□ -1.82
CMTM3Q96MX0 RNU1-106P-201ENST00000384382 164 ntBASIC3.7□□□□□ -1.82
CMTM3Q96MX0 RPS27AP14-201ENST00000422868 454 ntBASIC3.7□□□□□ -1.82
CMTM3Q96MX0 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC3.7□□□□□ -1.82
CMTM3Q96MX0 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC3.7□□□□□ -1.82
CMTM3Q96MX0 RBMY2QP-201ENST00000429799 1147 ntBASIC3.7□□□□□ -1.82
CMTM3Q96MX0 OR4K11P-201ENST00000431829 904 ntBASIC3.7□□□□□ -1.82
CMTM3Q96MX0 RPL7P36-201ENST00000444633 681 ntBASIC3.7□□□□□ -1.82
CMTM3Q96MX0 EIF4EBP2P1-201ENST00000450009 343 ntBASIC3.7□□□□□ -1.82
CMTM3Q96MX0 AC097262.1-201ENST00000452559 548 ntBASIC3.7□□□□□ -1.82
CMTM3Q96MX0 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC3.7□□□□□ -1.82
CMTM3Q96MX0 AC007967.1-201ENST00000455422 1159 ntBASIC3.7□□□□□ -1.82
CMTM3Q96MX0 BX284632.1-201ENST00000478218 541 ntBASIC3.7□□□□□ -1.82
CMTM3Q96MX0 BET1P1-201ENST00000482276 359 ntBASIC3.7□□□□□ -1.82
CMTM3Q96MX0 RPL23AP72-201ENST00000492447 435 ntBASIC3.7□□□□□ -1.82
CMTM3Q96MX0 AC008638.1-201ENST00000506035 866 ntBASIC3.7□□□□□ -1.82
CMTM3Q96MX0 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC3.7□□□□□ -1.82
CMTM3Q96MX0 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC3.7□□□□□ -1.82
CMTM3Q96MX0 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.7□□□□□ -1.82
CMTM3Q96MX0 TBCA-206ENST00000518338 551 ntTSL 2 BASIC3.7□□□□□ -1.82
CMTM3Q96MX0 AP000676.2-201ENST00000529711 301 ntBASIC3.7□□□□□ -1.82
CMTM3Q96MX0 AP001880.2-201ENST00000538233 448 ntBASIC3.7□□□□□ -1.82
CMTM3Q96MX0 AKIRIN1P1-201ENST00000547384 544 ntBASIC3.7□□□□□ -1.82
CMTM3Q96MX0 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC3.7□□□□□ -1.82
CMTM3Q96MX0 AC063950.1-201ENST00000552036 308 ntBASIC3.7□□□□□ -1.82
CMTM3Q96MX0 AC044860.2-201ENST00000561005 179 ntBASIC3.7□□□□□ -1.82
CMTM3Q96MX0 BGLT3-201ENST00000564523 994 ntBASIC3.7□□□□□ -1.82
CMTM3Q96MX0 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC3.7□□□□□ -1.82
CMTM3Q96MX0 MIR4646-201ENST00000580775 63 ntBASIC3.7□□□□□ -1.82
CMTM3Q96MX0 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC3.7□□□□□ -1.82
CMTM3Q96MX0 WISP1-OT1-201ENST00000602893 642 ntBASIC3.7□□□□□ -1.82
CMTM3Q96MX0 AP000403.1-201ENST00000603349 851 ntBASIC3.7□□□□□ -1.82
CMTM3Q96MX0 AC079587.1-201ENST00000603846 277 ntBASIC3.7□□□□□ -1.82
CMTM3Q96MX0 AC013244.1-201ENST00000604279 193 ntBASIC3.7□□□□□ -1.82
CMTM3Q96MX0 MIR8058-201ENST00000615737 89 ntBASIC3.7□□□□□ -1.82
CMTM3Q96MX0 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC3.7□□□□□ -1.82
CMTM3Q96MX0 AL672296.1-201ENST00000427780 2158 ntBASIC3.7□□□□□ -1.82
CMTM3Q96MX0 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 128.2 ms