Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 AL390208.1-201ENST00000605885 644 ntBASIC4.36□□□□□ -1.71
ATG4AQ8WYN0 AL592295.2-201ENST00000612578 206 ntBASIC4.36□□□□□ -1.71
ATG4AQ8WYN0 AC100827.5-201ENST00000615883 426 ntBASIC4.36□□□□□ -1.71
ATG4AQ8WYN0 U6.42-201ENST00000618440 107 ntBASIC4.36□□□□□ -1.71
ATG4AQ8WYN0 AL158209.2-201ENST00000619266 216 ntBASIC4.36□□□□□ -1.71
ATG4AQ8WYN0 PISRT1-201ENST00000626175 531 ntBASIC4.36□□□□□ -1.71
ATG4AQ8WYN0 AC140479.6-201ENST00000633535 357 ntBASIC4.36□□□□□ -1.71
ATG4AQ8WYN0 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
ATG4AQ8WYN0 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
ATG4AQ8WYN0 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.36□□□□□ -1.71
ATG4AQ8WYN0 AC004520.1-201ENST00000608362 1413 ntBASIC4.36□□□□□ -1.71
ATG4AQ8WYN0 AC095050.2-201ENST00000510748 1458 ntBASIC4.36□□□□□ -1.71
ATG4AQ8WYN0 AL049780.3-201ENST00000624612 1583 ntBASIC4.36□□□□□ -1.71
ATG4AQ8WYN0 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
ATG4AQ8WYN0 AC097714.1-201ENST00000511272 1647 ntBASIC4.35□□□□□ -1.71
ATG4AQ8WYN0 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
ATG4AQ8WYN0 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
ATG4AQ8WYN0 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.35□□□□□ -1.71
ATG4AQ8WYN0 ERCC6-202ENST00000374127 1782 ntBASIC4.35□□□□□ -1.71
ATG4AQ8WYN0 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
ATG4AQ8WYN0 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.35□□□□□ -1.71
ATG4AQ8WYN0 AC027290.2-201ENST00000623210 18662 ntBASIC4.35□□□□□ -1.71
ATG4AQ8WYN0 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
ATG4AQ8WYN0 Y_RNA.296-201ENST00000364930 108 ntBASIC4.35□□□□□ -1.71
ATG4AQ8WYN0 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
ATG4AQ8WYN0 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
ATG4AQ8WYN0 SNORA37-201ENST00000384504 129 ntBASIC4.35□□□□□ -1.71
ATG4AQ8WYN0 RNA5SP332-201ENST00000391063 115 ntBASIC4.35□□□□□ -1.71
ATG4AQ8WYN0 RPL31P1-201ENST00000398116 372 ntBASIC4.35□□□□□ -1.71
ATG4AQ8WYN0 RPS3AP36-201ENST00000398190 775 ntBASIC4.35□□□□□ -1.71
ATG4AQ8WYN0 RPS20P2-201ENST00000402520 389 ntBASIC4.35□□□□□ -1.71
ATG4AQ8WYN0 RNA5SP39-201ENST00000411245 120 ntBASIC4.35□□□□□ -1.71
ATG4AQ8WYN0 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC4.35□□□□□ -1.71
ATG4AQ8WYN0 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
ATG4AQ8WYN0 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC4.35□□□□□ -1.71
ATG4AQ8WYN0 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC4.35□□□□□ -1.71
ATG4AQ8WYN0 PSPHP1-201ENST00000450062 261 ntBASIC4.35□□□□□ -1.71
ATG4AQ8WYN0 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC4.35□□□□□ -1.71
ATG4AQ8WYN0 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
ATG4AQ8WYN0 AC087312.1-201ENST00000471411 480 ntBASIC4.35□□□□□ -1.71
ATG4AQ8WYN0 AC012170.1-201ENST00000495139 359 ntBASIC4.35□□□□□ -1.71
ATG4AQ8WYN0 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC4.35□□□□□ -1.71
ATG4AQ8WYN0 AC016065.2-201ENST00000514530 444 ntBASIC4.35□□□□□ -1.71
ATG4AQ8WYN0 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC4.35□□□□□ -1.71
ATG4AQ8WYN0 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC4.35□□□□□ -1.71
ATG4AQ8WYN0 DYNLL1P4-201ENST00000549314 266 ntBASIC4.35□□□□□ -1.71
ATG4AQ8WYN0 AC063950.1-201ENST00000552036 308 ntBASIC4.35□□□□□ -1.71
ATG4AQ8WYN0 AC068831.4-201ENST00000556118 109 ntBASIC4.35□□□□□ -1.71
ATG4AQ8WYN0 AL157394.1-201ENST00000562983 1224 ntBASIC4.35□□□□□ -1.71
ATG4AQ8WYN0 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC4.35□□□□□ -1.71
ATG4AQ8WYN0 AL391840.1-201ENST00000571144 367 ntBASIC4.35□□□□□ -1.71
ATG4AQ8WYN0 MTCO3P24-201ENST00000572729 782 ntBASIC4.35□□□□□ -1.71
ATG4AQ8WYN0 AC053481.3-201ENST00000577881 843 ntBASIC4.35□□□□□ -1.71
ATG4AQ8WYN0 HMGN1P30-201ENST00000589286 268 ntBASIC4.35□□□□□ -1.71
ATG4AQ8WYN0 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC4.35□□□□□ -1.71
ATG4AQ8WYN0 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC4.35□□□□□ -1.71
ATG4AQ8WYN0 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
ATG4AQ8WYN0 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
ATG4AQ8WYN0 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
ATG4AQ8WYN0 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC4.35□□□□□ -1.71
ATG4AQ8WYN0 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
ATG4AQ8WYN0 AL356321.1-201ENST00000621360 228 ntBASIC4.35□□□□□ -1.71
ATG4AQ8WYN0 AC004009.2-201ENST00000623016 728 ntBASIC4.35□□□□□ -1.71
ATG4AQ8WYN0 AC124864.2-201ENST00000624736 186 ntBASIC4.35□□□□□ -1.71
ATG4AQ8WYN0 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC4.35□□□□□ -1.71
ATG4AQ8WYN0 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
ATG4AQ8WYN0 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
ATG4AQ8WYN0 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC4.35□□□□□ -1.71
ATG4AQ8WYN0 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
ATG4AQ8WYN0 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.34□□□□□ -1.71
ATG4AQ8WYN0 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.34□□□□□ -1.71
ATG4AQ8WYN0 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
ATG4AQ8WYN0 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.71
ATG4AQ8WYN0 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
ATG4AQ8WYN0 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
ATG4AQ8WYN0 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.71
ATG4AQ8WYN0 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.34□□□□□ -1.71
ATG4AQ8WYN0 OR52B1P-201ENST00000316506 909 ntBASIC4.34□□□□□ -1.71
ATG4AQ8WYN0 U8.3-201ENST00000363321 132 ntBASIC4.34□□□□□ -1.71
ATG4AQ8WYN0 RNY4P34-201ENST00000364779 95 ntBASIC4.34□□□□□ -1.71
ATG4AQ8WYN0 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC4.34□□□□□ -1.71
ATG4AQ8WYN0 LAP3P1-201ENST00000403648 294 ntBASIC4.34□□□□□ -1.71
ATG4AQ8WYN0 RPL7P25-201ENST00000404151 721 ntBASIC4.34□□□□□ -1.71
ATG4AQ8WYN0 FCF1P10-201ENST00000407590 479 ntBASIC4.34□□□□□ -1.71
ATG4AQ8WYN0 RN7SKP235-201ENST00000410662 305 ntBASIC4.34□□□□□ -1.71
ATG4AQ8WYN0 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC4.34□□□□□ -1.71
ATG4AQ8WYN0 MTATP6P27-201ENST00000416987 621 ntBASIC4.34□□□□□ -1.71
ATG4AQ8WYN0 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC4.34□□□□□ -1.71
ATG4AQ8WYN0 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC4.34□□□□□ -1.71
ATG4AQ8WYN0 MTND1P2-201ENST00000430604 821 ntBASIC4.34□□□□□ -1.71
ATG4AQ8WYN0 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC4.34□□□□□ -1.71
ATG4AQ8WYN0 AL132765.1-201ENST00000434165 553 ntBASIC4.34□□□□□ -1.71
ATG4AQ8WYN0 AC006466.1-201ENST00000438721 289 ntBASIC4.34□□□□□ -1.71
ATG4AQ8WYN0 FAM103A2P-201ENST00000444122 354 ntBASIC4.34□□□□□ -1.71
ATG4AQ8WYN0 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC4.34□□□□□ -1.71
ATG4AQ8WYN0 RPL23AP81-201ENST00000455252 467 ntBASIC4.34□□□□□ -1.71
ATG4AQ8WYN0 RN7SL98P-201ENST00000462271 300 ntBASIC4.34□□□□□ -1.71
ATG4AQ8WYN0 RPS20P21-201ENST00000466859 343 ntBASIC4.34□□□□□ -1.71
ATG4AQ8WYN0 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4.34□□□□□ -1.71
ATG4AQ8WYN0 AC013356.1-201ENST00000489027 564 ntBASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 137.5 ms