Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 SNORA74A-201ENST00000364089 198 ntBASIC4.87□□□□□ -1.63
NUP43Q8NFH3 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
NUP43Q8NFH3 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
NUP43Q8NFH3 RNU6-1029P-201ENST00000384109 107 ntBASIC4.87□□□□□ -1.63
NUP43Q8NFH3 RNU6-1013P-201ENST00000384180 107 ntBASIC4.87□□□□□ -1.63
NUP43Q8NFH3 MIR548F5-201ENST00000408421 86 ntBASIC4.87□□□□□ -1.63
NUP43Q8NFH3 OR3A2-201ENST00000408891 1076 ntBASIC4.87□□□□□ -1.63
NUP43Q8NFH3 RNU2-39P-201ENST00000410604 198 ntBASIC4.87□□□□□ -1.63
NUP43Q8NFH3 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC4.87□□□□□ -1.63
NUP43Q8NFH3 AC093655.2-201ENST00000425735 631 ntBASIC4.87□□□□□ -1.63
NUP43Q8NFH3 OR2AS1P-201ENST00000427827 319 ntBASIC4.87□□□□□ -1.63
NUP43Q8NFH3 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC4.87□□□□□ -1.63
NUP43Q8NFH3 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC4.87□□□□□ -1.63
NUP43Q8NFH3 RPL32P28-201ENST00000443577 397 ntBASIC4.87□□□□□ -1.63
NUP43Q8NFH3 RAC1P7-201ENST00000445367 377 ntBASIC4.87□□□□□ -1.63
NUP43Q8NFH3 AC243772.1-201ENST00000451620 410 ntBASIC4.87□□□□□ -1.63
NUP43Q8NFH3 MTND1P9-201ENST00000453775 944 ntBASIC4.87□□□□□ -1.63
NUP43Q8NFH3 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC4.87□□□□□ -1.63
NUP43Q8NFH3 AC108059.3-201ENST00000456388 214 ntBASIC4.87□□□□□ -1.63
NUP43Q8NFH3 AC106872.2-201ENST00000494303 480 ntBASIC4.87□□□□□ -1.63
NUP43Q8NFH3 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC4.87□□□□□ -1.63
NUP43Q8NFH3 RPS4XP20-201ENST00000505751 772 ntBASIC4.87□□□□□ -1.63
NUP43Q8NFH3 LIAS-206ENST00000513731 826 ntTSL 5 BASIC4.87□□□□□ -1.63
NUP43Q8NFH3 AC093303.1-201ENST00000514549 295 ntBASIC4.87□□□□□ -1.63
NUP43Q8NFH3 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC4.87□□□□□ -1.63
NUP43Q8NFH3 BX510359.5-201ENST00000515651 304 ntBASIC4.87□□□□□ -1.63
NUP43Q8NFH3 RNA5SP230-201ENST00000517039 122 ntBASIC4.87□□□□□ -1.63
NUP43Q8NFH3 AC022634.1-201ENST00000520765 532 ntBASIC4.87□□□□□ -1.63
NUP43Q8NFH3 AC109635.4-202ENST00000531666 412 ntBASIC4.87□□□□□ -1.63
NUP43Q8NFH3 LSM3P2-201ENST00000551246 273 ntBASIC4.87□□□□□ -1.63
NUP43Q8NFH3 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC4.87□□□□□ -1.63
NUP43Q8NFH3 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC4.87□□□□□ -1.63
NUP43Q8NFH3 MIR4703-201ENST00000577728 79 ntBASIC4.87□□□□□ -1.63
NUP43Q8NFH3 MIR4700-201ENST00000578311 74 ntBASIC4.87□□□□□ -1.63
NUP43Q8NFH3 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC4.87□□□□□ -1.63
NUP43Q8NFH3 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC4.87□□□□□ -1.63
NUP43Q8NFH3 AC011477.5-201ENST00000586571 259 ntBASIC4.87□□□□□ -1.63
NUP43Q8NFH3 AC069307.1-201ENST00000602820 447 ntBASIC4.87□□□□□ -1.63
NUP43Q8NFH3 SUMO2P15-201ENST00000604285 278 ntBASIC4.87□□□□□ -1.63
NUP43Q8NFH3 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC4.87□□□□□ -1.63
NUP43Q8NFH3 MIR6837-201ENST00000620884 64 ntBASIC4.87□□□□□ -1.63
NUP43Q8NFH3 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC4.87□□□□□ -1.63
NUP43Q8NFH3 AC244517.12-201ENST00000623581 663 ntBASIC4.87□□□□□ -1.63
NUP43Q8NFH3 AC235565.1-201ENST00000456962 1325 ntBASIC4.87□□□□□ -1.63
NUP43Q8NFH3 MTND4P14-201ENST00000435799 1354 ntBASIC4.87□□□□□ -1.63
NUP43Q8NFH3 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC4.87□□□□□ -1.63
NUP43Q8NFH3 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
NUP43Q8NFH3 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
NUP43Q8NFH3 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
NUP43Q8NFH3 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC4.87□□□□□ -1.63
NUP43Q8NFH3 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
NUP43Q8NFH3 THAP12P4-201ENST00000528321 2266 ntBASIC4.86□□□□□ -1.63
NUP43Q8NFH3 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC4.86□□□□□ -1.63
NUP43Q8NFH3 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
NUP43Q8NFH3 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC4.86□□□□□ -1.63
NUP43Q8NFH3 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
NUP43Q8NFH3 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
NUP43Q8NFH3 AC104623.2-202ENST00000623477 4002 ntBASIC4.86□□□□□ -1.63
NUP43Q8NFH3 SCARNA15-201ENST00000607520 4325 ntBASIC4.86□□□□□ -1.63
NUP43Q8NFH3 AC097461.1-201ENST00000568928 2821 ntBASIC4.86□□□□□ -1.63
NUP43Q8NFH3 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
NUP43Q8NFH3 AC011155.1-201ENST00000316512 456 ntBASIC4.86□□□□□ -1.63
NUP43Q8NFH3 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC4.86□□□□□ -1.63
NUP43Q8NFH3 U3.3-201ENST00000362986 216 ntBASIC4.86□□□□□ -1.63
NUP43Q8NFH3 PARD3-204ENST00000374768 799 ntTSL 3 BASIC4.86□□□□□ -1.63
NUP43Q8NFH3 RNU6-308P-201ENST00000390957 107 ntBASIC4.86□□□□□ -1.63
NUP43Q8NFH3 MTCYBP4-201ENST00000401524 249 ntBASIC4.86□□□□□ -1.63
NUP43Q8NFH3 SSXP10-201ENST00000402595 565 ntBASIC4.86□□□□□ -1.63
NUP43Q8NFH3 RN7SKP158-201ENST00000410453 326 ntBASIC4.86□□□□□ -1.63
NUP43Q8NFH3 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC4.86□□□□□ -1.63
NUP43Q8NFH3 ARL5AP1-201ENST00000418991 388 ntBASIC4.86□□□□□ -1.63
NUP43Q8NFH3 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC4.86□□□□□ -1.63
NUP43Q8NFH3 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC4.86□□□□□ -1.63
NUP43Q8NFH3 AC245028.2-201ENST00000458673 253 ntBASIC4.86□□□□□ -1.63
NUP43Q8NFH3 snoU13.7-201ENST00000459220 104 ntBASIC4.86□□□□□ -1.63
NUP43Q8NFH3 RNU6-1208P-201ENST00000459588 107 ntBASIC4.86□□□□□ -1.63
NUP43Q8NFH3 AC083904.1-201ENST00000487828 231 ntBASIC4.86□□□□□ -1.63
NUP43Q8NFH3 RPL30P11-201ENST00000495304 339 ntBASIC4.86□□□□□ -1.63
NUP43Q8NFH3 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC4.86□□□□□ -1.63
NUP43Q8NFH3 HMGB1P21-201ENST00000502313 581 ntBASIC4.86□□□□□ -1.63
NUP43Q8NFH3 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC4.86□□□□□ -1.63
NUP43Q8NFH3 RPS27AP18-201ENST00000515536 459 ntBASIC4.86□□□□□ -1.63
NUP43Q8NFH3 RNU6-1038P-201ENST00000516516 104 ntBASIC4.86□□□□□ -1.63
NUP43Q8NFH3 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC4.86□□□□□ -1.63
NUP43Q8NFH3 TBCA-207ENST00000520039 157 ntTSL 3 BASIC4.86□□□□□ -1.63
NUP43Q8NFH3 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC4.86□□□□□ -1.63
NUP43Q8NFH3 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC4.86□□□□□ -1.63
NUP43Q8NFH3 AP000889.2-201ENST00000532684 490 ntBASIC4.86□□□□□ -1.63
NUP43Q8NFH3 AC018630.1-201ENST00000541376 925 ntBASIC4.86□□□□□ -1.63
NUP43Q8NFH3 AC063950.1-201ENST00000552036 308 ntBASIC4.86□□□□□ -1.63
NUP43Q8NFH3 SNRPGP18-201ENST00000553000 214 ntBASIC4.86□□□□□ -1.63
NUP43Q8NFH3 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC4.86□□□□□ -1.63
NUP43Q8NFH3 AC006349.1-201ENST00000555526 235 ntBASIC4.86□□□□□ -1.63
NUP43Q8NFH3 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC4.86□□□□□ -1.63
NUP43Q8NFH3 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC4.86□□□□□ -1.63
NUP43Q8NFH3 COX6CP3-201ENST00000580869 223 ntBASIC4.86□□□□□ -1.63
NUP43Q8NFH3 AC092807.2-201ENST00000609367 243 ntBASIC4.86□□□□□ -1.63
NUP43Q8NFH3 AL713922.2-201ENST00000619384 716 ntBASIC4.86□□□□□ -1.63
NUP43Q8NFH3 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
NUP43Q8NFH3 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 155 ms