Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 AC093663.1-201ENST00000497190 394 ntBASIC3.11□□□□□ -1.91
NUDCD3Q8IVD9 ACTR3BP4-201ENST00000503033 1244 ntBASIC3.11□□□□□ -1.91
NUDCD3Q8IVD9 AC021678.1-201ENST00000505195 936 ntBASIC3.11□□□□□ -1.91
NUDCD3Q8IVD9 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.11□□□□□ -1.91
NUDCD3Q8IVD9 POU5F1P7-201ENST00000508759 541 ntBASIC3.11□□□□□ -1.91
NUDCD3Q8IVD9 RNU4ATAC10P-201ENST00000516967 122 ntBASIC3.11□□□□□ -1.91
NUDCD3Q8IVD9 RNU6-467P-201ENST00000517027 110 ntBASIC3.11□□□□□ -1.91
NUDCD3Q8IVD9 SNORA31.20-201ENST00000517111 133 ntBASIC3.11□□□□□ -1.91
NUDCD3Q8IVD9 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC3.11□□□□□ -1.91
NUDCD3Q8IVD9 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
NUDCD3Q8IVD9 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC3.11□□□□□ -1.91
NUDCD3Q8IVD9 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC3.11□□□□□ -1.91
NUDCD3Q8IVD9 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC3.11□□□□□ -1.91
NUDCD3Q8IVD9 AC034268.2-201ENST00000571784 482 ntBASIC3.11□□□□□ -1.91
NUDCD3Q8IVD9 MIR2682-201ENST00000580305 110 ntBASIC3.11□□□□□ -1.91
NUDCD3Q8IVD9 MAGOH2P-202ENST00000584384 429 ntBASIC3.11□□□□□ -1.91
NUDCD3Q8IVD9 AC093227.2-201ENST00000589357 285 ntBASIC3.11□□□□□ -1.91
NUDCD3Q8IVD9 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC3.11□□□□□ -1.91
NUDCD3Q8IVD9 U3.45-201ENST00000607547 219 ntBASIC3.11□□□□□ -1.91
NUDCD3Q8IVD9 AP000238.1-201ENST00000608759 426 ntBASIC3.11□□□□□ -1.91
NUDCD3Q8IVD9 MIR6798-201ENST00000612887 67 ntBASIC3.11□□□□□ -1.91
NUDCD3Q8IVD9 AC008759.3-201ENST00000613300 508 ntBASIC3.11□□□□□ -1.91
NUDCD3Q8IVD9 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
NUDCD3Q8IVD9 AC073968.1-201ENST00000618594 637 ntBASIC3.11□□□□□ -1.91
NUDCD3Q8IVD9 RBM12B-AS1-201ENST00000623283 653 ntBASIC3.11□□□□□ -1.91
NUDCD3Q8IVD9 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
NUDCD3Q8IVD9 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
NUDCD3Q8IVD9 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC3.11□□□□□ -1.91
NUDCD3Q8IVD9 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
NUDCD3Q8IVD9 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC3.11□□□□□ -1.91
NUDCD3Q8IVD9 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC3.1□□□□□ -1.91
NUDCD3Q8IVD9 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
NUDCD3Q8IVD9 AC108206.1-201ENST00000570186 4159 ntBASIC3.1□□□□□ -1.91
NUDCD3Q8IVD9 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
NUDCD3Q8IVD9 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
NUDCD3Q8IVD9 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
NUDCD3Q8IVD9 RNA5SP258-201ENST00000362750 119 ntBASIC3.1□□□□□ -1.91
NUDCD3Q8IVD9 RNU6-839P-201ENST00000363347 108 ntBASIC3.1□□□□□ -1.91
NUDCD3Q8IVD9 RNU6-730P-201ENST00000383954 104 ntBASIC3.1□□□□□ -1.91
NUDCD3Q8IVD9 SNORA40.4-201ENST00000390971 128 ntBASIC3.1□□□□□ -1.91
NUDCD3Q8IVD9 MTND4LP20-201ENST00000402379 270 ntBASIC3.1□□□□□ -1.91
NUDCD3Q8IVD9 AL356967.1-201ENST00000406305 431 ntBASIC3.1□□□□□ -1.91
NUDCD3Q8IVD9 AL591034.1-201ENST00000407447 340 ntBASIC3.1□□□□□ -1.91
NUDCD3Q8IVD9 BX323014.1-201ENST00000412876 237 ntBASIC3.1□□□□□ -1.91
NUDCD3Q8IVD9 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC3.1□□□□□ -1.91
NUDCD3Q8IVD9 SYF2P2-201ENST00000417620 583 ntBASIC3.1□□□□□ -1.91
NUDCD3Q8IVD9 YPEL5P1-201ENST00000419731 367 ntBASIC3.1□□□□□ -1.91
NUDCD3Q8IVD9 HSFY1P1-201ENST00000423928 1178 ntBASIC3.1□□□□□ -1.91
NUDCD3Q8IVD9 RPS6P14-201ENST00000425165 719 ntBASIC3.1□□□□□ -1.91
NUDCD3Q8IVD9 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC3.1□□□□□ -1.91
NUDCD3Q8IVD9 AC006548.1-201ENST00000427470 102 ntBASIC3.1□□□□□ -1.91
NUDCD3Q8IVD9 AC092017.2-201ENST00000427600 362 ntBASIC3.1□□□□□ -1.91
NUDCD3Q8IVD9 AC127537.2-201ENST00000439258 465 ntBASIC3.1□□□□□ -1.91
NUDCD3Q8IVD9 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC3.1□□□□□ -1.91
NUDCD3Q8IVD9 AC004022.1-201ENST00000447766 1066 ntBASIC3.1□□□□□ -1.91
NUDCD3Q8IVD9 AL034418.1-201ENST00000448675 860 ntBASIC3.1□□□□□ -1.91
NUDCD3Q8IVD9 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC3.1□□□□□ -1.91
NUDCD3Q8IVD9 ELOCP23-201ENST00000452014 332 ntBASIC3.1□□□□□ -1.91
NUDCD3Q8IVD9 TRBV26-201ENST00000456572 344 ntBASIC3.1□□□□□ -1.91
NUDCD3Q8IVD9 RPL21P8-201ENST00000465083 535 ntBASIC3.1□□□□□ -1.91
NUDCD3Q8IVD9 AC092902.1-201ENST00000486999 259 ntBASIC3.1□□□□□ -1.91
NUDCD3Q8IVD9 AC068724.1-201ENST00000487100 792 ntBASIC3.1□□□□□ -1.91
NUDCD3Q8IVD9 AC098799.1-201ENST00000504752 800 ntBASIC3.1□□□□□ -1.91
NUDCD3Q8IVD9 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
NUDCD3Q8IVD9 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC3.1□□□□□ -1.91
NUDCD3Q8IVD9 RN7SKP282-201ENST00000516824 299 ntBASIC3.1□□□□□ -1.91
NUDCD3Q8IVD9 SMILR-201ENST00000533992 553 ntTSL 4 BASIC3.1□□□□□ -1.91
NUDCD3Q8IVD9 AC092451.2-201ENST00000538746 658 ntBASIC3.1□□□□□ -1.91
NUDCD3Q8IVD9 MIR5186-201ENST00000577504 120 ntBASIC3.1□□□□□ -1.91
NUDCD3Q8IVD9 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC3.1□□□□□ -1.91
NUDCD3Q8IVD9 AC090330.1-201ENST00000588646 764 ntBASIC3.1□□□□□ -1.91
NUDCD3Q8IVD9 AC103881.1-201ENST00000603476 538 ntBASIC3.1□□□□□ -1.91
NUDCD3Q8IVD9 AP005137.2-201ENST00000609238 400 ntBASIC3.1□□□□□ -1.91
NUDCD3Q8IVD9 AL590240.3-201ENST00000621416 943 ntBASIC3.1□□□□□ -1.91
NUDCD3Q8IVD9 CR381572.1-201ENST00000625098 102 ntBASIC3.1□□□□□ -1.91
NUDCD3Q8IVD9 MAPK10-322ENST00000641485 4530 ntBASIC3.1□□□□□ -1.91
NUDCD3Q8IVD9 AC093010.3-201ENST00000570269 15214 ntBASIC3.1□□□□□ -1.91
NUDCD3Q8IVD9 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
NUDCD3Q8IVD9 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.1□□□□□ -1.91
NUDCD3Q8IVD9 Z83843.1-201ENST00000604070 3685 ntBASIC3.1□□□□□ -1.91
NUDCD3Q8IVD9 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC3.1□□□□□ -1.91
NUDCD3Q8IVD9 AC111188.2-201ENST00000529697 1387 ntBASIC3.1□□□□□ -1.91
NUDCD3Q8IVD9 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.1□□□□□ -1.91
NUDCD3Q8IVD9 MAPK6PS3-201ENST00000403865 2162 ntBASIC3.1□□□□□ -1.91
NUDCD3Q8IVD9 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
NUDCD3Q8IVD9 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
NUDCD3Q8IVD9 FAM35CP-201ENST00000554755 2470 ntBASIC3.09□□□□□ -1.91
NUDCD3Q8IVD9 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC3.09□□□□□ -1.91
NUDCD3Q8IVD9 OR1S2-201ENST00000302592 978 ntBASIC3.09□□□□□ -1.91
NUDCD3Q8IVD9 MIR218-2-201ENST00000385006 110 ntBASIC3.09□□□□□ -1.91
NUDCD3Q8IVD9 RPL31P1-201ENST00000398116 372 ntBASIC3.09□□□□□ -1.91
NUDCD3Q8IVD9 RNA5SP274-201ENST00000410484 108 ntBASIC3.09□□□□□ -1.91
NUDCD3Q8IVD9 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC3.09□□□□□ -1.91
NUDCD3Q8IVD9 AL136133.1-201ENST00000413694 376 ntBASIC3.09□□□□□ -1.91
NUDCD3Q8IVD9 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC3.09□□□□□ -1.91
NUDCD3Q8IVD9 MTCYBP32-201ENST00000427945 1084 ntBASIC3.09□□□□□ -1.91
NUDCD3Q8IVD9 HSPD1P21-201ENST00000436541 245 ntBASIC3.09□□□□□ -1.91
NUDCD3Q8IVD9 AC108734.1-201ENST00000439549 399 ntBASIC3.09□□□□□ -1.91
NUDCD3Q8IVD9 RABEPKP1-201ENST00000440529 1026 ntBASIC3.09□□□□□ -1.91
NUDCD3Q8IVD9 RPL23AP16-201ENST00000441715 421 ntBASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 84.2 ms