Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 HMGB3P6-201ENST00000444896 598 ntBASIC3.2□□□□□ -1.9
NIPAL3Q6P499 Z95327.1-201ENST00000446082 482 ntBASIC3.2□□□□□ -1.9
NIPAL3Q6P499 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.2□□□□□ -1.9
NIPAL3Q6P499 AL136097.1-201ENST00000456945 913 ntBASIC3.2□□□□□ -1.9
NIPAL3Q6P499 AL672167.3-201ENST00000465951 960 ntBASIC3.2□□□□□ -1.9
NIPAL3Q6P499 AC012181.1-201ENST00000479895 423 ntBASIC3.2□□□□□ -1.9
NIPAL3Q6P499 AC108734.3-201ENST00000481241 1165 ntBASIC3.2□□□□□ -1.9
NIPAL3Q6P499 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
NIPAL3Q6P499 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC3.2□□□□□ -1.9
NIPAL3Q6P499 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC3.2□□□□□ -1.9
NIPAL3Q6P499 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC3.2□□□□□ -1.9
NIPAL3Q6P499 SNORA19.3-201ENST00000516165 130 ntBASIC3.2□□□□□ -1.9
NIPAL3Q6P499 SNORA31.8-201ENST00000516327 108 ntBASIC3.2□□□□□ -1.9
NIPAL3Q6P499 RNU1-95P-201ENST00000516357 160 ntBASIC3.2□□□□□ -1.9
NIPAL3Q6P499 RNU1-128P-201ENST00000516704 160 ntBASIC3.2□□□□□ -1.9
NIPAL3Q6P499 TRMT10BP1-201ENST00000519377 943 ntBASIC3.2□□□□□ -1.9
NIPAL3Q6P499 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC3.2□□□□□ -1.9
NIPAL3Q6P499 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
NIPAL3Q6P499 AC026333.2-201ENST00000542164 106 ntBASIC3.2□□□□□ -1.9
NIPAL3Q6P499 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC3.2□□□□□ -1.9
NIPAL3Q6P499 YWHAZP1-201ENST00000556286 722 ntBASIC3.2□□□□□ -1.9
NIPAL3Q6P499 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC3.2□□□□□ -1.9
NIPAL3Q6P499 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC3.2□□□□□ -1.9
NIPAL3Q6P499 AC245036.5-201ENST00000596330 847 ntBASIC3.2□□□□□ -1.9
NIPAL3Q6P499 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.2□□□□□ -1.9
NIPAL3Q6P499 AC010591.1-201ENST00000603941 649 ntBASIC3.2□□□□□ -1.9
NIPAL3Q6P499 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC3.2□□□□□ -1.9
NIPAL3Q6P499 AL110115.1-201ENST00000614396 364 ntBASIC3.2□□□□□ -1.9
NIPAL3Q6P499 CYCSP41-201ENST00000616920 296 ntBASIC3.2□□□□□ -1.9
NIPAL3Q6P499 AC069209.1-201ENST00000619282 651 ntBASIC3.2□□□□□ -1.9
NIPAL3Q6P499 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.2□□□□□ -1.9
NIPAL3Q6P499 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.2□□□□□ -1.9
NIPAL3Q6P499 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.2□□□□□ -1.9
NIPAL3Q6P499 CDR1-202ENST00000625883 1485 ntBASIC3.2□□□□□ -1.9
NIPAL3Q6P499 AL136164.4-201ENST00000625013 2135 ntBASIC3.2□□□□□ -1.9
NIPAL3Q6P499 AC007823.1-201ENST00000569932 1566 ntBASIC3.2□□□□□ -1.9
NIPAL3Q6P499 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
NIPAL3Q6P499 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
NIPAL3Q6P499 AC002546.1-201ENST00000588041 2504 ntBASIC3.19□□□□□ -1.9
NIPAL3Q6P499 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
NIPAL3Q6P499 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC3.19□□□□□ -1.9
NIPAL3Q6P499 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
NIPAL3Q6P499 SNRPEP3-201ENST00000338402 276 ntBASIC3.19□□□□□ -1.9
NIPAL3Q6P499 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
NIPAL3Q6P499 OR5H2-201ENST00000355273 945 ntBASIC3.19□□□□□ -1.9
NIPAL3Q6P499 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
NIPAL3Q6P499 RNU4-51P-201ENST00000364206 140 ntBASIC3.19□□□□□ -1.9
NIPAL3Q6P499 SNORA62.3-201ENST00000365110 153 ntBASIC3.19□□□□□ -1.9
NIPAL3Q6P499 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC3.19□□□□□ -1.9
NIPAL3Q6P499 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.19□□□□□ -1.9
NIPAL3Q6P499 ATP5A1P2-201ENST00000412323 255 ntBASIC3.19□□□□□ -1.9
NIPAL3Q6P499 RAB9AP3-201ENST00000412737 573 ntBASIC3.19□□□□□ -1.9
NIPAL3Q6P499 AC009237.5-201ENST00000414271 501 ntBASIC3.19□□□□□ -1.9
NIPAL3Q6P499 AL161449.1-201ENST00000414531 1199 ntBASIC3.19□□□□□ -1.9
NIPAL3Q6P499 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.19□□□□□ -1.9
NIPAL3Q6P499 RPL31P12-201ENST00000422587 358 ntBASIC3.19□□□□□ -1.9
NIPAL3Q6P499 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.19□□□□□ -1.9
NIPAL3Q6P499 AC018644.1-201ENST00000429934 551 ntBASIC3.19□□□□□ -1.9
NIPAL3Q6P499 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.19□□□□□ -1.9
NIPAL3Q6P499 BX679664.1-201ENST00000434429 253 ntBASIC3.19□□□□□ -1.9
NIPAL3Q6P499 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.19□□□□□ -1.9
NIPAL3Q6P499 CDC27P1-201ENST00000445384 715 ntBASIC3.19□□□□□ -1.9
NIPAL3Q6P499 RAB9AP1-201ENST00000449393 573 ntBASIC3.19□□□□□ -1.9
NIPAL3Q6P499 OFD1P3Y-201ENST00000453312 783 ntBASIC3.19□□□□□ -1.9
NIPAL3Q6P499 AC026410.2-201ENST00000460281 156 ntBASIC3.19□□□□□ -1.9
NIPAL3Q6P499 RPL7P15-201ENST00000461190 712 ntBASIC3.19□□□□□ -1.9
NIPAL3Q6P499 RN7SL594P-201ENST00000470590 287 ntBASIC3.19□□□□□ -1.9
NIPAL3Q6P499 RPS15AP17-201ENST00000470598 390 ntBASIC3.19□□□□□ -1.9
NIPAL3Q6P499 AC104982.1-201ENST00000478775 574 ntBASIC3.19□□□□□ -1.9
NIPAL3Q6P499 AP000563.1-201ENST00000490865 758 ntBASIC3.19□□□□□ -1.9
NIPAL3Q6P499 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC3.19□□□□□ -1.9
NIPAL3Q6P499 SETP14-201ENST00000497538 873 ntBASIC3.19□□□□□ -1.9
NIPAL3Q6P499 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC3.19□□□□□ -1.9
NIPAL3Q6P499 AC104619.4-201ENST00000510773 249 ntBASIC3.19□□□□□ -1.9
NIPAL3Q6P499 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC3.19□□□□□ -1.9
NIPAL3Q6P499 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.19□□□□□ -1.9
NIPAL3Q6P499 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC3.19□□□□□ -1.9
NIPAL3Q6P499 RANP9-201ENST00000519957 271 ntBASIC3.19□□□□□ -1.9
NIPAL3Q6P499 AC024224.1-201ENST00000538284 609 ntBASIC3.19□□□□□ -1.9
NIPAL3Q6P499 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC3.19□□□□□ -1.9
NIPAL3Q6P499 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC3.19□□□□□ -1.9
NIPAL3Q6P499 GTF2IP22-201ENST00000554443 182 ntBASIC3.19□□□□□ -1.9
NIPAL3Q6P499 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.19□□□□□ -1.9
NIPAL3Q6P499 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.19□□□□□ -1.9
NIPAL3Q6P499 AC034105.4-201ENST00000568304 277 ntBASIC3.19□□□□□ -1.9
NIPAL3Q6P499 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.19□□□□□ -1.9
NIPAL3Q6P499 AC024257.5-201ENST00000612739 531 ntBASIC3.19□□□□□ -1.9
NIPAL3Q6P499 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC3.19□□□□□ -1.9
NIPAL3Q6P499 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
NIPAL3Q6P499 AC120349.2-201ENST00000625002 298 ntBASIC3.19□□□□□ -1.9
NIPAL3Q6P499 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC3.19□□□□□ -1.9
NIPAL3Q6P499 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
NIPAL3Q6P499 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.19□□□□□ -1.9
NIPAL3Q6P499 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.19□□□□□ -1.9
NIPAL3Q6P499 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
NIPAL3Q6P499 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.19□□□□□ -1.9
NIPAL3Q6P499 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
NIPAL3Q6P499 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
NIPAL3Q6P499 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
NIPAL3Q6P499 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 141.2 ms