Protein–RNA interactions for Protein: Q5VVW2

GARNL3, GTPase-activating Rap/Ran-GAP domain-like protein 3, humanhuman

Predictions only

Length 1,013 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3Q5VVW2 SPATA31D2P-201ENST00000429999 4388 ntBASIC3.79□□□□□ -1.8
GARNL3Q5VVW2 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.79□□□□□ -1.8
GARNL3Q5VVW2 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
GARNL3Q5VVW2 RNU6-173P-201ENST00000364215 104 ntBASIC3.79□□□□□ -1.8
GARNL3Q5VVW2 SNORA4.1-201ENST00000364263 144 ntBASIC3.79□□□□□ -1.8
GARNL3Q5VVW2 AC025750.1-201ENST00000399891 379 ntBASIC3.79□□□□□ -1.8
GARNL3Q5VVW2 RPL7AP73-201ENST00000413490 353 ntBASIC3.79□□□□□ -1.8
GARNL3Q5VVW2 XKRYP1-201ENST00000423438 492 ntBASIC3.79□□□□□ -1.8
GARNL3Q5VVW2 AC017083.1-201ENST00000428093 483 ntBASIC3.79□□□□□ -1.8
GARNL3Q5VVW2 XKRYP2-201ENST00000432915 492 ntBASIC3.79□□□□□ -1.8
GARNL3Q5VVW2 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC3.79□□□□□ -1.8
GARNL3Q5VVW2 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC3.79□□□□□ -1.8
GARNL3Q5VVW2 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC3.79□□□□□ -1.8
GARNL3Q5VVW2 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC3.79□□□□□ -1.8
GARNL3Q5VVW2 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC3.79□□□□□ -1.8
GARNL3Q5VVW2 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.79□□□□□ -1.8
GARNL3Q5VVW2 RPS3AP6-201ENST00000484430 795 ntBASIC3.79□□□□□ -1.8
GARNL3Q5VVW2 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
GARNL3Q5VVW2 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.79□□□□□ -1.8
GARNL3Q5VVW2 RNA5SP216-201ENST00000516111 123 ntBASIC3.79□□□□□ -1.8
GARNL3Q5VVW2 AC105185.1-201ENST00000518705 535 ntBASIC3.79□□□□□ -1.8
GARNL3Q5VVW2 AC008802.1-201ENST00000519121 791 ntBASIC3.79□□□□□ -1.8
GARNL3Q5VVW2 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
GARNL3Q5VVW2 AC239860.2-201ENST00000525886 270 ntBASIC3.79□□□□□ -1.8
GARNL3Q5VVW2 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC3.79□□□□□ -1.8
GARNL3Q5VVW2 PDCL2P2-201ENST00000533651 189 ntBASIC3.79□□□□□ -1.8
GARNL3Q5VVW2 OR6C7P-201ENST00000547875 934 ntBASIC3.79□□□□□ -1.8
GARNL3Q5VVW2 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC3.79□□□□□ -1.8
GARNL3Q5VVW2 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC3.79□□□□□ -1.8
GARNL3Q5VVW2 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC3.79□□□□□ -1.8
GARNL3Q5VVW2 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC3.79□□□□□ -1.8
GARNL3Q5VVW2 FAM60BP-201ENST00000578364 658 ntBASIC3.79□□□□□ -1.8
GARNL3Q5VVW2 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC3.79□□□□□ -1.8
GARNL3Q5VVW2 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC3.79□□□□□ -1.8
GARNL3Q5VVW2 AC093227.2-201ENST00000589357 285 ntBASIC3.79□□□□□ -1.8
GARNL3Q5VVW2 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC3.79□□□□□ -1.8
GARNL3Q5VVW2 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.79□□□□□ -1.8
GARNL3Q5VVW2 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC3.79□□□□□ -1.8
GARNL3Q5VVW2 AL606490.9-201ENST00000603331 271 ntBASIC3.79□□□□□ -1.8
GARNL3Q5VVW2 AL451086.1-201ENST00000605596 223 ntBASIC3.79□□□□□ -1.8
GARNL3Q5VVW2 AC103710.3-201ENST00000608157 948 ntBASIC3.79□□□□□ -1.8
GARNL3Q5VVW2 TUG1_1.1-201ENST00000610654 145 ntBASIC3.79□□□□□ -1.8
GARNL3Q5VVW2 AL355810.1-201ENST00000614629 552 ntBASIC3.79□□□□□ -1.8
GARNL3Q5VVW2 AL391261.4-201ENST00000616012 481 ntBASIC3.79□□□□□ -1.8
GARNL3Q5VVW2 AC008147.4-201ENST00000617570 1204 ntBASIC3.79□□□□□ -1.8
GARNL3Q5VVW2 U7.8-201ENST00000619968 63 ntBASIC3.79□□□□□ -1.8
GARNL3Q5VVW2 MIR6500-201ENST00000622700 86 ntBASIC3.79□□□□□ -1.8
GARNL3Q5VVW2 AP000770.2-201ENST00000623694 100 ntBASIC3.79□□□□□ -1.8
GARNL3Q5VVW2 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.79□□□□□ -1.8
GARNL3Q5VVW2 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.79□□□□□ -1.8
GARNL3Q5VVW2 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC3.79□□□□□ -1.8
GARNL3Q5VVW2 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC3.79□□□□□ -1.8
GARNL3Q5VVW2 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.79□□□□□ -1.8
GARNL3Q5VVW2 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
GARNL3Q5VVW2 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
GARNL3Q5VVW2 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
GARNL3Q5VVW2 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.79□□□□□ -1.8
GARNL3Q5VVW2 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
GARNL3Q5VVW2 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
GARNL3Q5VVW2 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.78□□□□□ -1.8
GARNL3Q5VVW2 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC3.78□□□□□ -1.8
GARNL3Q5VVW2 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.78□□□□□ -1.8
GARNL3Q5VVW2 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC3.78□□□□□ -1.8
GARNL3Q5VVW2 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
GARNL3Q5VVW2 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
GARNL3Q5VVW2 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC3.78□□□□□ -1.8
GARNL3Q5VVW2 AL359837.1-201ENST00000381357 287 ntBASIC3.78□□□□□ -1.8
GARNL3Q5VVW2 DEFB109C-201ENST00000382575 264 ntBASIC3.78□□□□□ -1.8
GARNL3Q5VVW2 DEFB109B-201ENST00000382656 264 ntBASIC3.78□□□□□ -1.8
GARNL3Q5VVW2 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC3.78□□□□□ -1.8
GARNL3Q5VVW2 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.78□□□□□ -1.8
GARNL3Q5VVW2 BEND7P1-201ENST00000422058 457 ntBASIC3.78□□□□□ -1.8
GARNL3Q5VVW2 HMGB3P5-201ENST00000428894 612 ntBASIC3.78□□□□□ -1.8
GARNL3Q5VVW2 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC3.78□□□□□ -1.8
GARNL3Q5VVW2 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC3.78□□□□□ -1.8
GARNL3Q5VVW2 MTND1P32-201ENST00000433043 938 ntBASIC3.78□□□□□ -1.8
GARNL3Q5VVW2 MTCYBP45-201ENST00000435243 565 ntBASIC3.78□□□□□ -1.8
GARNL3Q5VVW2 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC3.78□□□□□ -1.8
GARNL3Q5VVW2 MTND5P14-201ENST00000441481 1267 ntBASIC3.78□□□□□ -1.8
GARNL3Q5VVW2 AL662791.1-201ENST00000441992 928 ntBASIC3.78□□□□□ -1.8
GARNL3Q5VVW2 AL591719.1-201ENST00000444669 744 ntBASIC3.78□□□□□ -1.8
GARNL3Q5VVW2 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC3.78□□□□□ -1.8
GARNL3Q5VVW2 RSL24D1P3-201ENST00000449255 495 ntBASIC3.78□□□□□ -1.8
GARNL3Q5VVW2 PAXBP1P1-201ENST00000449315 447 ntBASIC3.78□□□□□ -1.8
GARNL3Q5VVW2 RPS11P1-201ENST00000451072 473 ntBASIC3.78□□□□□ -1.8
GARNL3Q5VVW2 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC3.78□□□□□ -1.8
GARNL3Q5VVW2 RPL23AP31-201ENST00000456160 467 ntBASIC3.78□□□□□ -1.8
GARNL3Q5VVW2 CEACAMP4-201ENST00000457676 421 ntBASIC3.78□□□□□ -1.8
GARNL3Q5VVW2 RPL21P11-201ENST00000461458 483 ntBASIC3.78□□□□□ -1.8
GARNL3Q5VVW2 SNRPGP3-201ENST00000469405 227 ntBASIC3.78□□□□□ -1.8
GARNL3Q5VVW2 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC3.78□□□□□ -1.8
GARNL3Q5VVW2 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC3.78□□□□□ -1.8
GARNL3Q5VVW2 AC104563.1-201ENST00000476147 376 ntBASIC3.78□□□□□ -1.8
GARNL3Q5VVW2 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC3.78□□□□□ -1.8
GARNL3Q5VVW2 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC3.78□□□□□ -1.8
GARNL3Q5VVW2 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC3.78□□□□□ -1.8
GARNL3Q5VVW2 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC3.78□□□□□ -1.8
GARNL3Q5VVW2 SNRPGP16-201ENST00000533275 226 ntBASIC3.78□□□□□ -1.8
GARNL3Q5VVW2 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
GARNL3Q5VVW2 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 146.5 ms