Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC5.38□□□□□ -1.55
PCDH1Q08174 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.38□□□□□ -1.55
PCDH1Q08174 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.38□□□□□ -1.55
PCDH1Q08174 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC5.38□□□□□ -1.55
PCDH1Q08174 AC093591.2-201ENST00000565254 3843 ntBASIC5.38□□□□□ -1.55
PCDH1Q08174 AC018809.2-201ENST00000602436 3823 ntBASIC5.38□□□□□ -1.55
PCDH1Q08174 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC5.38□□□□□ -1.55
PCDH1Q08174 TANK-205ENST00000405852 2155 ntTSL 5 BASIC5.38□□□□□ -1.55
PCDH1Q08174 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC5.38□□□□□ -1.55
PCDH1Q08174 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC5.37□□□□□ -1.55
PCDH1Q08174 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
PCDH1Q08174 NRK-204ENST00000540278 1687 ntTSL 2 BASIC5.37□□□□□ -1.55
PCDH1Q08174 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.37□□□□□ -1.55
PCDH1Q08174 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC5.37□□□□□ -1.55
PCDH1Q08174 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
PCDH1Q08174 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.37□□□□□ -1.55
PCDH1Q08174 OSBPL9P4-201ENST00000371707 1800 ntBASIC5.37□□□□□ -1.55
PCDH1Q08174 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
PCDH1Q08174 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.37□□□□□ -1.55
PCDH1Q08174 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
PCDH1Q08174 RN7SKP145-201ENST00000363291 303 ntBASIC5.37□□□□□ -1.55
PCDH1Q08174 Y_RNA.135-201ENST00000363439 95 ntBASIC5.37□□□□□ -1.55
PCDH1Q08174 RNA5SP510-201ENST00000364697 99 ntBASIC5.37□□□□□ -1.55
PCDH1Q08174 RNU6-593P-201ENST00000364716 112 ntBASIC5.37□□□□□ -1.55
PCDH1Q08174 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
PCDH1Q08174 RNU6-432P-201ENST00000384196 109 ntBASIC5.37□□□□□ -1.55
PCDH1Q08174 RNA5SP187-201ENST00000384400 119 ntBASIC5.37□□□□□ -1.55
PCDH1Q08174 MT-TG-201ENST00000387429 68 ntBASIC5.37□□□□□ -1.55
PCDH1Q08174 RNU6-516P-201ENST00000411381 104 ntBASIC5.37□□□□□ -1.55
PCDH1Q08174 RPL31P2-201ENST00000413849 377 ntBASIC5.37□□□□□ -1.55
PCDH1Q08174 GJA6P-201ENST00000415117 1042 ntBASIC5.37□□□□□ -1.55
PCDH1Q08174 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC5.37□□□□□ -1.55
PCDH1Q08174 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC5.37□□□□□ -1.55
PCDH1Q08174 RPL35AP22-201ENST00000436855 335 ntBASIC5.37□□□□□ -1.55
PCDH1Q08174 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC5.37□□□□□ -1.55
PCDH1Q08174 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC5.37□□□□□ -1.55
PCDH1Q08174 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
PCDH1Q08174 AC239809.1-201ENST00000450470 217 ntBASIC5.37□□□□□ -1.55
PCDH1Q08174 AL450023.1-201ENST00000450868 751 ntBASIC5.37□□□□□ -1.55
PCDH1Q08174 AC005008.1-201ENST00000456151 612 ntBASIC5.37□□□□□ -1.55
PCDH1Q08174 SCARNA18-201ENST00000459004 134 ntBASIC5.37□□□□□ -1.55
PCDH1Q08174 RPL21P8-201ENST00000465083 535 ntBASIC5.37□□□□□ -1.55
PCDH1Q08174 AC008638.1-201ENST00000506035 866 ntBASIC5.37□□□□□ -1.55
PCDH1Q08174 AC008526.1-201ENST00000509149 338 ntBASIC5.37□□□□□ -1.55
PCDH1Q08174 HIGD1AP13-201ENST00000509878 289 ntBASIC5.37□□□□□ -1.55
PCDH1Q08174 AC108078.2-201ENST00000510750 236 ntBASIC5.37□□□□□ -1.55
PCDH1Q08174 SNORA25.10-201ENST00000515926 124 ntBASIC5.37□□□□□ -1.55
PCDH1Q08174 RNU6-27P-201ENST00000516146 107 ntBASIC5.37□□□□□ -1.55
PCDH1Q08174 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC5.37□□□□□ -1.55
PCDH1Q08174 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC5.37□□□□□ -1.55
PCDH1Q08174 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC5.37□□□□□ -1.55
PCDH1Q08174 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC5.37□□□□□ -1.55
PCDH1Q08174 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC5.37□□□□□ -1.55
PCDH1Q08174 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC5.37□□□□□ -1.55
PCDH1Q08174 AC110743.1-201ENST00000584870 478 ntBASIC5.37□□□□□ -1.55
PCDH1Q08174 IGLCOR22-2-201ENST00000605398 313 ntBASIC5.37□□□□□ -1.55
PCDH1Q08174 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC5.37□□□□□ -1.55
PCDH1Q08174 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC5.37□□□□□ -1.55
PCDH1Q08174 AL138726.1-201ENST00000614873 333 ntBASIC5.37□□□□□ -1.55
PCDH1Q08174 uc_338.7-201ENST00000621834 124 ntBASIC5.37□□□□□ -1.55
PCDH1Q08174 Z69720.2-201ENST00000624755 279 ntBASIC5.37□□□□□ -1.55
PCDH1Q08174 AC091925.2-201ENST00000625059 256 ntBASIC5.37□□□□□ -1.55
PCDH1Q08174 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
PCDH1Q08174 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5.37□□□□□ -1.55
PCDH1Q08174 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
PCDH1Q08174 KPNA2P1-201ENST00000458289 1591 ntBASIC5.37□□□□□ -1.55
PCDH1Q08174 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
PCDH1Q08174 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.37□□□□□ -1.55
PCDH1Q08174 ZNF807-201ENST00000328088 1707 ntBASIC5.37□□□□□ -1.55
PCDH1Q08174 AC133552.1-201ENST00000569988 4007 ntBASIC5.37□□□□□ -1.55
PCDH1Q08174 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
PCDH1Q08174 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.36□□□□□ -1.55
PCDH1Q08174 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.36□□□□□ -1.55
PCDH1Q08174 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
PCDH1Q08174 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
PCDH1Q08174 SAGE4P-201ENST00000442271 3381 ntBASIC5.36□□□□□ -1.55
PCDH1Q08174 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
PCDH1Q08174 Y_RNA.47-201ENST00000362697 108 ntBASIC5.36□□□□□ -1.55
PCDH1Q08174 Y_RNA.557-201ENST00000384680 107 ntBASIC5.36□□□□□ -1.55
PCDH1Q08174 RNA5SP219-201ENST00000390940 113 ntBASIC5.36□□□□□ -1.55
PCDH1Q08174 AC005522.1-201ENST00000395416 346 ntBASIC5.36□□□□□ -1.55
PCDH1Q08174 RPL30P2-201ENST00000414021 291 ntBASIC5.36□□□□□ -1.55
PCDH1Q08174 AC079809.1-201ENST00000415468 276 ntBASIC5.36□□□□□ -1.55
PCDH1Q08174 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC5.36□□□□□ -1.55
PCDH1Q08174 PDSS1P1-201ENST00000422953 1114 ntBASIC5.36□□□□□ -1.55
PCDH1Q08174 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC5.36□□□□□ -1.55
PCDH1Q08174 CBX3P6-201ENST00000430257 527 ntBASIC5.36□□□□□ -1.55
PCDH1Q08174 AC073465.2-201ENST00000440938 498 ntBASIC5.36□□□□□ -1.55
PCDH1Q08174 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC5.36□□□□□ -1.55
PCDH1Q08174 AC073109.1-201ENST00000445066 978 ntBASIC5.36□□□□□ -1.55
PCDH1Q08174 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC5.36□□□□□ -1.55
PCDH1Q08174 RPL21P23-201ENST00000446654 460 ntBASIC5.36□□□□□ -1.55
PCDH1Q08174 RPS15AP27-201ENST00000449183 343 ntBASIC5.36□□□□□ -1.55
PCDH1Q08174 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC5.36□□□□□ -1.55
PCDH1Q08174 AC116533.1-201ENST00000459748 321 ntBASIC5.36□□□□□ -1.55
PCDH1Q08174 AC053481.1-201ENST00000467217 306 ntBASIC5.36□□□□□ -1.55
PCDH1Q08174 AC058823.1-201ENST00000485315 474 ntBASIC5.36□□□□□ -1.55
PCDH1Q08174 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC5.36□□□□□ -1.55
PCDH1Q08174 AC135721.1-201ENST00000497954 479 ntBASIC5.36□□□□□ -1.55
PCDH1Q08174 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 91.2 ms