Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC4.71□□□□□ -1.66
RHBDL3P58872 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC4.71□□□□□ -1.66
RHBDL3P58872 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
RHBDL3P58872 AC139713.2-215ENST00000641428 5037 ntBASIC4.71□□□□□ -1.66
RHBDL3P58872 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
RHBDL3P58872 AC092435.4-201ENST00000623012 4159 ntBASIC4.71□□□□□ -1.66
RHBDL3P58872 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
RHBDL3P58872 ZNF542P-204ENST00000482727 1305 ntBASIC4.71□□□□□ -1.66
RHBDL3P58872 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
RHBDL3P58872 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
RHBDL3P58872 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
RHBDL3P58872 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
RHBDL3P58872 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
RHBDL3P58872 RNU6-97P-201ENST00000363387 104 ntBASIC4.7□□□□□ -1.66
RHBDL3P58872 RPS3AP26-201ENST00000398259 784 ntBASIC4.7□□□□□ -1.66
RHBDL3P58872 AL590704.1-201ENST00000402856 794 ntBASIC4.7□□□□□ -1.66
RHBDL3P58872 RNU2-47P-201ENST00000410649 186 ntBASIC4.7□□□□□ -1.66
RHBDL3P58872 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC4.7□□□□□ -1.66
RHBDL3P58872 PDSS1P1-201ENST00000422953 1114 ntBASIC4.7□□□□□ -1.66
RHBDL3P58872 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC4.7□□□□□ -1.66
RHBDL3P58872 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC4.7□□□□□ -1.66
RHBDL3P58872 EEF1E1P1-201ENST00000446998 430 ntBASIC4.7□□□□□ -1.66
RHBDL3P58872 VN1R34P-201ENST00000447387 883 ntBASIC4.7□□□□□ -1.66
RHBDL3P58872 AC091564.1-201ENST00000464563 479 ntBASIC4.7□□□□□ -1.66
RHBDL3P58872 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC4.7□□□□□ -1.66
RHBDL3P58872 PPIAP15-201ENST00000479662 484 ntBASIC4.7□□□□□ -1.66
RHBDL3P58872 ACTR3P3-201ENST00000480448 893 ntBASIC4.7□□□□□ -1.66
RHBDL3P58872 RN7SL271P-201ENST00000487601 295 ntBASIC4.7□□□□□ -1.66
RHBDL3P58872 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC4.7□□□□□ -1.66
RHBDL3P58872 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC4.7□□□□□ -1.66
RHBDL3P58872 MTCYBP43-201ENST00000513621 740 ntBASIC4.7□□□□□ -1.66
RHBDL3P58872 AC007991.1-201ENST00000522680 631 ntBASIC4.7□□□□□ -1.66
RHBDL3P58872 AC068587.4-201ENST00000533893 186 ntBASIC4.7□□□□□ -1.66
RHBDL3P58872 ELOCP32-201ENST00000548625 324 ntBASIC4.7□□□□□ -1.66
RHBDL3P58872 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC4.7□□□□□ -1.66
RHBDL3P58872 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.7□□□□□ -1.66
RHBDL3P58872 AC072039.2-201ENST00000608883 439 ntBASIC4.7□□□□□ -1.66
RHBDL3P58872 AL139418.1-201ENST00000613613 177 ntBASIC4.7□□□□□ -1.66
RHBDL3P58872 AL607023.1-201ENST00000620045 248 ntBASIC4.7□□□□□ -1.66
RHBDL3P58872 MIR7154-201ENST00000620673 73 ntBASIC4.7□□□□□ -1.66
RHBDL3P58872 MIR6075-201ENST00000620782 95 ntBASIC4.7□□□□□ -1.66
RHBDL3P58872 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC4.7□□□□□ -1.66
RHBDL3P58872 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC4.7□□□□□ -1.66
RHBDL3P58872 AC092447.10-201ENST00000620607 1652 ntBASIC4.7□□□□□ -1.66
RHBDL3P58872 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
RHBDL3P58872 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC4.7□□□□□ -1.66
RHBDL3P58872 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC4.7□□□□□ -1.66
RHBDL3P58872 AL672296.1-201ENST00000427780 2158 ntBASIC4.7□□□□□ -1.66
RHBDL3P58872 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
RHBDL3P58872 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC4.69□□□□□ -1.66
RHBDL3P58872 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.69□□□□□ -1.66
RHBDL3P58872 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
RHBDL3P58872 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
RHBDL3P58872 FRG1BP-201ENST00000278882 761 ntBASIC4.69□□□□□ -1.66
RHBDL3P58872 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
RHBDL3P58872 RPL21P132-201ENST00000331267 462 ntBASIC4.69□□□□□ -1.66
RHBDL3P58872 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC4.69□□□□□ -1.66
RHBDL3P58872 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC4.69□□□□□ -1.66
RHBDL3P58872 MTCYBP45-201ENST00000435243 565 ntBASIC4.69□□□□□ -1.66
RHBDL3P58872 UBE2FP3-201ENST00000436366 524 ntBASIC4.69□□□□□ -1.66
RHBDL3P58872 HLA-N-201ENST00000437516 135 ntBASIC4.69□□□□□ -1.66
RHBDL3P58872 AC004866.2-201ENST00000438285 481 ntBASIC4.69□□□□□ -1.66
RHBDL3P58872 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC4.69□□□□□ -1.66
RHBDL3P58872 OR6K5P-201ENST00000447050 945 ntBASIC4.69□□□□□ -1.66
RHBDL3P58872 AL358232.1-201ENST00000448030 501 ntBASIC4.69□□□□□ -1.66
RHBDL3P58872 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC4.69□□□□□ -1.66
RHBDL3P58872 MTND1P9-201ENST00000453775 944 ntBASIC4.69□□□□□ -1.66
RHBDL3P58872 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC4.69□□□□□ -1.66
RHBDL3P58872 RN7SL585P-201ENST00000470538 280 ntBASIC4.69□□□□□ -1.66
RHBDL3P58872 LINC00888-204ENST00000487386 421 ntBASIC4.69□□□□□ -1.66
RHBDL3P58872 IGKV2D-23-201ENST00000518179 286 ntBASIC4.69□□□□□ -1.66
RHBDL3P58872 AC008802.1-201ENST00000519121 791 ntBASIC4.69□□□□□ -1.66
RHBDL3P58872 NAT2-202ENST00000520116 716 ntTSL 3 BASIC4.69□□□□□ -1.66
RHBDL3P58872 OR5AP1P-201ENST00000529730 940 ntBASIC4.69□□□□□ -1.66
RHBDL3P58872 LRRC34P1-201ENST00000542742 915 ntBASIC4.69□□□□□ -1.66
RHBDL3P58872 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC4.69□□□□□ -1.66
RHBDL3P58872 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC4.69□□□□□ -1.66
RHBDL3P58872 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC4.69□□□□□ -1.66
RHBDL3P58872 AL355810.1-201ENST00000614629 552 ntBASIC4.69□□□□□ -1.66
RHBDL3P58872 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC4.69□□□□□ -1.66
RHBDL3P58872 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
RHBDL3P58872 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.69□□□□□ -1.66
RHBDL3P58872 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.69□□□□□ -1.66
RHBDL3P58872 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
RHBDL3P58872 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC4.68□□□□□ -1.66
RHBDL3P58872 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
RHBDL3P58872 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC4.68□□□□□ -1.66
RHBDL3P58872 MTCO1P9-201ENST00000505577 1534 ntBASIC4.68□□□□□ -1.66
RHBDL3P58872 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.68□□□□□ -1.66
RHBDL3P58872 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
RHBDL3P58872 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.68□□□□□ -1.66
RHBDL3P58872 RNA5SP88-201ENST00000365560 109 ntBASIC4.68□□□□□ -1.66
RHBDL3P58872 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
RHBDL3P58872 RNU6-723P-201ENST00000383973 107 ntBASIC4.68□□□□□ -1.66
RHBDL3P58872 RN7SKP266-201ENST00000410232 287 ntBASIC4.68□□□□□ -1.66
RHBDL3P58872 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC4.68□□□□□ -1.66
RHBDL3P58872 Z74696.2-201ENST00000436514 498 ntBASIC4.68□□□□□ -1.66
RHBDL3P58872 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC4.68□□□□□ -1.66
RHBDL3P58872 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC4.68□□□□□ -1.66
RHBDL3P58872 AC234775.1-201ENST00000454247 670 ntBASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms