Protein–RNA interactions for Protein: P43378

PTPN9, Tyrosine-protein phosphatase non-receptor type 9, humanhuman

Predictions only

Length 593 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9P43378 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC4.11□□□□□ -1.75
PTPN9P43378 AC024589.1-201ENST00000512207 263 ntBASIC4.11□□□□□ -1.75
PTPN9P43378 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC4.11□□□□□ -1.75
PTPN9P43378 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC4.11□□□□□ -1.75
PTPN9P43378 AC022861.1-201ENST00000522981 663 ntBASIC4.11□□□□□ -1.75
PTPN9P43378 STX3-204ENST00000530221 534 ntTSL 5 BASIC4.11□□□□□ -1.75
PTPN9P43378 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC4.11□□□□□ -1.75
PTPN9P43378 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC4.11□□□□□ -1.75
PTPN9P43378 ROCK1P1-201ENST00000573767 549 ntBASIC4.11□□□□□ -1.75
PTPN9P43378 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC4.11□□□□□ -1.75
PTPN9P43378 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC4.11□□□□□ -1.75
PTPN9P43378 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC4.11□□□□□ -1.75
PTPN9P43378 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC4.11□□□□□ -1.75
PTPN9P43378 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC4.11□□□□□ -1.75
PTPN9P43378 AL355812.1-201ENST00000603215 216 ntBASIC4.11□□□□□ -1.75
PTPN9P43378 AC064872.1-201ENST00000604823 1072 ntBASIC4.11□□□□□ -1.75
PTPN9P43378 ACTR3BP1-201ENST00000605584 1247 ntBASIC4.11□□□□□ -1.75
PTPN9P43378 AL591424.2-201ENST00000617023 128 ntBASIC4.11□□□□□ -1.75
PTPN9P43378 AL359715.5-201ENST00000623431 443 ntBASIC4.11□□□□□ -1.75
PTPN9P43378 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC4.11□□□□□ -1.75
PTPN9P43378 AC092192.1-201ENST00000633154 1018 ntBASIC4.11□□□□□ -1.75
PTPN9P43378 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
PTPN9P43378 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC4.11□□□□□ -1.75
PTPN9P43378 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
PTPN9P43378 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
PTPN9P43378 AL390237.1-201ENST00000404226 1415 ntBASIC4.11□□□□□ -1.75
PTPN9P43378 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
PTPN9P43378 LINC02471-203ENST00000641941 4752 ntBASIC4.11□□□□□ -1.75
PTPN9P43378 AP002001.2-201ENST00000529025 1469 ntBASIC4.11□□□□□ -1.75
PTPN9P43378 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
PTPN9P43378 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.1□□□□□ -1.75
PTPN9P43378 AL359893.1-201ENST00000447628 1580 ntBASIC4.1□□□□□ -1.75
PTPN9P43378 MTCO1P24-201ENST00000515438 1558 ntBASIC4.1□□□□□ -1.75
PTPN9P43378 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC4.1□□□□□ -1.75
PTPN9P43378 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
PTPN9P43378 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
PTPN9P43378 RNU4-91P-201ENST00000364778 135 ntBASIC4.1□□□□□ -1.75
PTPN9P43378 AC007066.1-201ENST00000392902 381 ntBASIC4.1□□□□□ -1.75
PTPN9P43378 AC136624.1-201ENST00000400791 413 ntBASIC4.1□□□□□ -1.75
PTPN9P43378 RNA5SP239-201ENST00000410218 129 ntBASIC4.1□□□□□ -1.75
PTPN9P43378 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC4.1□□□□□ -1.75
PTPN9P43378 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC4.1□□□□□ -1.75
PTPN9P43378 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC4.1□□□□□ -1.75
PTPN9P43378 AC092647.1-201ENST00000420654 287 ntBASIC4.1□□□□□ -1.75
PTPN9P43378 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC4.1□□□□□ -1.75
PTPN9P43378 OR51AB1P-201ENST00000429046 620 ntBASIC4.1□□□□□ -1.75
PTPN9P43378 PSMA2P3-201ENST00000429685 675 ntBASIC4.1□□□□□ -1.75
PTPN9P43378 AC091390.1-201ENST00000433904 331 ntBASIC4.1□□□□□ -1.75
PTPN9P43378 MTND5P14-201ENST00000441481 1267 ntBASIC4.1□□□□□ -1.75
PTPN9P43378 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC4.1□□□□□ -1.75
PTPN9P43378 RPL29P29-201ENST00000448725 423 ntBASIC4.1□□□□□ -1.75
PTPN9P43378 RPL36AP33-201ENST00000450395 310 ntBASIC4.1□□□□□ -1.75
PTPN9P43378 HMGB3P22-202ENST00000451823 572 ntBASIC4.1□□□□□ -1.75
PTPN9P43378 KATNBL1P6-201ENST00000453433 915 ntBASIC4.1□□□□□ -1.75
PTPN9P43378 ZNF114P1-201ENST00000453500 292 ntBASIC4.1□□□□□ -1.75
PTPN9P43378 TPTE2P5-203ENST00000458118 728 ntBASIC4.1□□□□□ -1.75
PTPN9P43378 AC091564.1-201ENST00000464563 479 ntBASIC4.1□□□□□ -1.75
PTPN9P43378 RPL30P9-201ENST00000465586 330 ntBASIC4.1□□□□□ -1.75
PTPN9P43378 AC146507.1-201ENST00000468335 354 ntBASIC4.1□□□□□ -1.75
PTPN9P43378 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC4.1□□□□□ -1.75
PTPN9P43378 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC4.1□□□□□ -1.75
PTPN9P43378 AC021678.1-201ENST00000505195 936 ntBASIC4.1□□□□□ -1.75
PTPN9P43378 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC4.1□□□□□ -1.75
PTPN9P43378 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC4.1□□□□□ -1.75
PTPN9P43378 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC4.1□□□□□ -1.75
PTPN9P43378 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC4.1□□□□□ -1.75
PTPN9P43378 POU5F1P7-201ENST00000508759 541 ntBASIC4.1□□□□□ -1.75
PTPN9P43378 FTH1P21-201ENST00000512179 511 ntBASIC4.1□□□□□ -1.75
PTPN9P43378 MTND5P4-201ENST00000514978 288 ntBASIC4.1□□□□□ -1.75
PTPN9P43378 MTCO1P35-201ENST00000515270 228 ntBASIC4.1□□□□□ -1.75
PTPN9P43378 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.1□□□□□ -1.75
PTPN9P43378 AC141257.3-201ENST00000572906 215 ntBASIC4.1□□□□□ -1.75
PTPN9P43378 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC4.1□□□□□ -1.75
PTPN9P43378 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC4.1□□□□□ -1.75
PTPN9P43378 AP001981.2-201ENST00000603241 418 ntBASIC4.1□□□□□ -1.75
PTPN9P43378 YWHAQP7-201ENST00000603536 658 ntBASIC4.1□□□□□ -1.75
PTPN9P43378 AL009028.1-201ENST00000604895 802 ntBASIC4.1□□□□□ -1.75
PTPN9P43378 AC090186.1-201ENST00000605991 572 ntBASIC4.1□□□□□ -1.75
PTPN9P43378 AC099669.2-201ENST00000616549 437 ntBASIC4.1□□□□□ -1.75
PTPN9P43378 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC4.1□□□□□ -1.75
PTPN9P43378 AL356266.1-201ENST00000623311 483 ntBASIC4.1□□□□□ -1.75
PTPN9P43378 RNA5SP196-201ENST00000625967 102 ntBASIC4.1□□□□□ -1.75
PTPN9P43378 BDP1P-201ENST00000582658 1990 ntBASIC4.1□□□□□ -1.75
PTPN9P43378 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.1□□□□□ -1.75
PTPN9P43378 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC4.1□□□□□ -1.75
PTPN9P43378 AC027287.1-201ENST00000553115 1453 ntBASIC4.1□□□□□ -1.75
PTPN9P43378 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
PTPN9P43378 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC4.1□□□□□ -1.75
PTPN9P43378 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
PTPN9P43378 NUP58P1-201ENST00000502546 1738 ntBASIC4.09□□□□□ -1.75
PTPN9P43378 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC4.09□□□□□ -1.75
PTPN9P43378 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.75
PTPN9P43378 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.09□□□□□ -1.75
PTPN9P43378 SPRR2C-201ENST00000290702 219 ntBASIC4.09□□□□□ -1.75
PTPN9P43378 Y_RNA.51-201ENST00000362725 102 ntBASIC4.09□□□□□ -1.75
PTPN9P43378 MIR199A2-201ENST00000385289 110 ntBASIC4.09□□□□□ -1.75
PTPN9P43378 RNU6-952P-201ENST00000391164 108 ntBASIC4.09□□□□□ -1.75
PTPN9P43378 AL031679.1-201ENST00000400616 525 ntBASIC4.09□□□□□ -1.75
PTPN9P43378 MIR1305-201ENST00000408300 86 ntBASIC4.09□□□□□ -1.75
PTPN9P43378 AMD1P2-201ENST00000412936 992 ntBASIC4.09□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 76.2 ms