Protein–RNA interactions for Protein: P35499

SCN4A, Sodium channel protein type 4 subunit alpha, humanhuman

Predictions only

Length 1,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4AP35499 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC3.07□□□□□ -1.92
SCN4AP35499 RPL5P13-201ENST00000462840 709 ntBASIC3.07□□□□□ -1.92
SCN4AP35499 AC093663.2-201ENST00000484625 313 ntBASIC3.07□□□□□ -1.92
SCN4AP35499 AC092436.1-201ENST00000506450 503 ntBASIC3.07□□□□□ -1.92
SCN4AP35499 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
SCN4AP35499 FABP5P6-201ENST00000510588 409 ntBASIC3.07□□□□□ -1.92
SCN4AP35499 ACTR6P1-201ENST00000514311 1104 ntBASIC3.07□□□□□ -1.92
SCN4AP35499 RN7SKP31-201ENST00000516354 278 ntBASIC3.07□□□□□ -1.92
SCN4AP35499 IGKV2-36-201ENST00000519999 223 ntBASIC3.07□□□□□ -1.92
SCN4AP35499 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC3.07□□□□□ -1.92
SCN4AP35499 MIR548Y-201ENST00000582739 110 ntBASIC3.07□□□□□ -1.92
SCN4AP35499 AC090115.4-201ENST00000609970 188 ntBASIC3.07□□□□□ -1.92
SCN4AP35499 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC3.07□□□□□ -1.92
SCN4AP35499 PISRT1-201ENST00000626175 531 ntBASIC3.07□□□□□ -1.92
SCN4AP35499 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
SCN4AP35499 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
SCN4AP35499 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
SCN4AP35499 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
SCN4AP35499 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC3.07□□□□□ -1.92
SCN4AP35499 MT-TP-201ENST00000387461 68 ntBASIC3.07□□□□□ -1.92
SCN4AP35499 RPS3AP26-201ENST00000398259 784 ntBASIC3.07□□□□□ -1.92
SCN4AP35499 Z85994.2-201ENST00000434327 452 ntBASIC3.07□□□□□ -1.92
SCN4AP35499 HMGB1P15-201ENST00000453854 435 ntBASIC3.07□□□□□ -1.92
SCN4AP35499 CEACAMP4-201ENST00000457676 421 ntBASIC3.07□□□□□ -1.92
SCN4AP35499 OR5AK3P-201ENST00000527486 1297 ntBASIC3.07□□□□□ -1.92
SCN4AP35499 RANP3-201ENST00000530970 276 ntBASIC3.07□□□□□ -1.92
SCN4AP35499 AC007536.1-201ENST00000533382 349 ntBASIC3.07□□□□□ -1.92
SCN4AP35499 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC3.07□□□□□ -1.92
SCN4AP35499 AC103810.6-201ENST00000606708 136 ntBASIC3.07□□□□□ -1.92
SCN4AP35499 MIR7111-201ENST00000619751 72 ntBASIC3.07□□□□□ -1.92
SCN4AP35499 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
SCN4AP35499 AC110994.2-201ENST00000635481 492 ntBASIC3.07□□□□□ -1.92
SCN4AP35499 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
SCN4AP35499 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.07□□□□□ -1.92
SCN4AP35499 Y_RNA.226-201ENST00000364337 114 ntBASIC3.06□□□□□ -1.92
SCN4AP35499 AL390023.1-201ENST00000428836 262 ntBASIC3.06□□□□□ -1.92
SCN4AP35499 MTND2P2-201ENST00000434633 945 ntBASIC3.06□□□□□ -1.92
SCN4AP35499 CKS1BP2-201ENST00000497342 240 ntBASIC3.06□□□□□ -1.92
SCN4AP35499 AC021146.7-201ENST00000509604 775 ntBASIC3.06□□□□□ -1.92
SCN4AP35499 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC3.06□□□□□ -1.92
SCN4AP35499 RNA5SP385-201ENST00000515947 110 ntBASIC3.06□□□□□ -1.92
SCN4AP35499 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC3.06□□□□□ -1.92
SCN4AP35499 RGS4-209ENST00000531057 544 ntTSL 4 BASIC3.06□□□□□ -1.92
SCN4AP35499 CD24P2-201ENST00000565486 219 ntBASIC3.06□□□□□ -1.92
SCN4AP35499 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC3.06□□□□□ -1.92
SCN4AP35499 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC3.06□□□□□ -1.92
SCN4AP35499 AC092184.1-201ENST00000625042 715 ntBASIC3.06□□□□□ -1.92
SCN4AP35499 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
SCN4AP35499 AC009501.3-201ENST00000605001 1352 ntBASIC3.06□□□□□ -1.92
SCN4AP35499 AL161781.1-201ENST00000354277 403 ntBASIC3.05□□□□□ -1.92
SCN4AP35499 RNA5SP99-201ENST00000364020 114 ntBASIC3.05□□□□□ -1.92
SCN4AP35499 RNU2-6P-201ENST00000411404 190 ntBASIC3.05□□□□□ -1.92
SCN4AP35499 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC3.05□□□□□ -1.92
SCN4AP35499 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC3.05□□□□□ -1.92
SCN4AP35499 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC3.05□□□□□ -1.92
SCN4AP35499 AC096638.1-201ENST00000444678 216 ntBASIC3.05□□□□□ -1.92
SCN4AP35499 CALM1P2-201ENST00000452941 448 ntBASIC3.05□□□□□ -1.92
SCN4AP35499 RPL30P9-201ENST00000465586 330 ntBASIC3.05□□□□□ -1.92
SCN4AP35499 HESX1-202ENST00000473921 757 ntTSL 5 BASIC3.05□□□□□ -1.92
SCN4AP35499 AC068587.2-201ENST00000478386 781 ntBASIC3.05□□□□□ -1.92
SCN4AP35499 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.05□□□□□ -1.92
SCN4AP35499 AL731537.2-201ENST00000561565 951 ntBASIC3.05□□□□□ -1.92
SCN4AP35499 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.05□□□□□ -1.92
SCN4AP35499 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC3.05□□□□□ -1.92
SCN4AP35499 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC3.05□□□□□ -1.92
SCN4AP35499 AC011472.4-201ENST00000615848 491 ntBASIC3.05□□□□□ -1.92
SCN4AP35499 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.05□□□□□ -1.92
SCN4AP35499 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC3.05□□□□□ -1.92
SCN4AP35499 AL589826.1-201ENST00000340697 249 ntBASIC3.05□□□□□ -1.92
SCN4AP35499 AL079342.1-201ENST00000401460 267 ntBASIC3.05□□□□□ -1.92
SCN4AP35499 AL589655.1-201ENST00000405398 482 ntBASIC3.05□□□□□ -1.92
SCN4AP35499 AL034374.1-201ENST00000406329 351 ntBASIC3.05□□□□□ -1.92
SCN4AP35499 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC3.05□□□□□ -1.92
SCN4AP35499 CACYBPP2-201ENST00000453625 678 ntBASIC3.05□□□□□ -1.92
SCN4AP35499 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC3.05□□□□□ -1.92
SCN4AP35499 HMGN2P23-201ENST00000456759 269 ntBASIC3.05□□□□□ -1.92
SCN4AP35499 OR4G11P-201ENST00000492842 939 ntBASIC3.05□□□□□ -1.92
SCN4AP35499 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC3.05□□□□□ -1.92
SCN4AP35499 RNA5SP76-201ENST00000516277 87 ntBASIC3.05□□□□□ -1.92
SCN4AP35499 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC3.05□□□□□ -1.92
SCN4AP35499 OR11H5P-201ENST00000554039 926 ntBASIC3.05□□□□□ -1.92
SCN4AP35499 AC100814.1-201ENST00000606963 623 ntBASIC3.05□□□□□ -1.92
SCN4AP35499 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC3.05□□□□□ -1.92
SCN4AP35499 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC3.05□□□□□ -1.92
SCN4AP35499 MIR6733-201ENST00000635723 61 ntBASIC3.05□□□□□ -1.92
SCN4AP35499 AC009487.2-201ENST00000420969 6821 ntBASIC3.04□□□□□ -1.92
SCN4AP35499 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
SCN4AP35499 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
SCN4AP35499 MTCO3P21-201ENST00000430791 643 ntBASIC3.04□□□□□ -1.92
SCN4AP35499 ARL5AP3-201ENST00000439327 386 ntBASIC3.04□□□□□ -1.92
SCN4AP35499 RPL23AP11-201ENST00000475260 469 ntBASIC3.04□□□□□ -1.92
SCN4AP35499 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC3.04□□□□□ -1.92
SCN4AP35499 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC3.04□□□□□ -1.92
SCN4AP35499 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.04□□□□□ -1.92
SCN4AP35499 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC3.04□□□□□ -1.92
SCN4AP35499 AC007423.1-201ENST00000605009 627 ntBASIC3.04□□□□□ -1.92
SCN4AP35499 AC107871.2-201ENST00000612894 502 ntBASIC3.04□□□□□ -1.92
SCN4AP35499 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC3.04□□□□□ -1.92
SCN4AP35499 AC123768.4-201ENST00000616244 701 ntBASIC3.04□□□□□ -1.92
SCN4AP35499 MIR1264-201ENST00000616374 69 ntBASIC3.04□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 89.1 ms