Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
XPAP23025 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC4.74□□□□□ -1.65
XPAP23025 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
XPAP23025 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
XPAP23025 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
XPAP23025 AL445487.1-201ENST00000415694 1580 ntBASIC4.74□□□□□ -1.65
XPAP23025 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.74□□□□□ -1.65
XPAP23025 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
XPAP23025 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC4.74□□□□□ -1.65
XPAP23025 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC4.74□□□□□ -1.65
XPAP23025 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC4.74□□□□□ -1.65
XPAP23025 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.74□□□□□ -1.65
XPAP23025 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
XPAP23025 Y_RNA.70-201ENST00000362886 110 ntBASIC4.74□□□□□ -1.65
XPAP23025 Y_RNA.159-201ENST00000363674 87 ntBASIC4.74□□□□□ -1.65
XPAP23025 Y_RNA.234-201ENST00000364409 97 ntBASIC4.74□□□□□ -1.65
XPAP23025 RNU6-534P-201ENST00000364877 106 ntBASIC4.74□□□□□ -1.65
XPAP23025 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.74□□□□□ -1.65
XPAP23025 RNU6-483P-201ENST00000384088 108 ntBASIC4.74□□□□□ -1.65
XPAP23025 ENSAP1-201ENST00000392855 326 ntBASIC4.74□□□□□ -1.65
XPAP23025 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC4.74□□□□□ -1.65
XPAP23025 BTBD10P2-201ENST00000404779 676 ntBASIC4.74□□□□□ -1.65
XPAP23025 RPS3AP24-201ENST00000407896 734 ntBASIC4.74□□□□□ -1.65
XPAP23025 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.74□□□□□ -1.65
XPAP23025 AC138393.2-201ENST00000414742 246 ntBASIC4.74□□□□□ -1.65
XPAP23025 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC4.74□□□□□ -1.65
XPAP23025 AC092832.1-201ENST00000422934 400 ntBASIC4.74□□□□□ -1.65
XPAP23025 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.74□□□□□ -1.65
XPAP23025 FABP7P2-201ENST00000429946 379 ntBASIC4.74□□□□□ -1.65
XPAP23025 AL049734.2-201ENST00000441066 616 ntBASIC4.74□□□□□ -1.65
XPAP23025 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC4.74□□□□□ -1.65
XPAP23025 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC4.74□□□□□ -1.65
XPAP23025 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC4.74□□□□□ -1.65
XPAP23025 RPL7P52-201ENST00000449200 742 ntBASIC4.74□□□□□ -1.65
XPAP23025 PPIAP3-201ENST00000450588 505 ntBASIC4.74□□□□□ -1.65
XPAP23025 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC4.74□□□□□ -1.65
XPAP23025 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.74□□□□□ -1.65
XPAP23025 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC4.74□□□□□ -1.65
XPAP23025 ZFRP1-201ENST00000457579 2970 ntBASIC4.74□□□□□ -1.65
XPAP23025 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC4.74□□□□□ -1.65
XPAP23025 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC4.74□□□□□ -1.65
XPAP23025 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC4.74□□□□□ -1.65
XPAP23025 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC4.74□□□□□ -1.65
XPAP23025 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.74□□□□□ -1.65
XPAP23025 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC4.74□□□□□ -1.65
XPAP23025 RNU6-507P-201ENST00000516045 100 ntBASIC4.74□□□□□ -1.65
XPAP23025 RNU4ATAC10P-201ENST00000516967 122 ntBASIC4.74□□□□□ -1.65
XPAP23025 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC4.74□□□□□ -1.65
XPAP23025 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC4.74□□□□□ -1.65
XPAP23025 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC4.74□□□□□ -1.65
XPAP23025 ARL1-211ENST00000551828 776 ntTSL 5 BASIC4.74□□□□□ -1.65
XPAP23025 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
XPAP23025 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC4.74□□□□□ -1.65
XPAP23025 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC4.74□□□□□ -1.65
XPAP23025 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC4.74□□□□□ -1.65
XPAP23025 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC4.74□□□□□ -1.65
XPAP23025 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC4.74□□□□□ -1.65
XPAP23025 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.74□□□□□ -1.65
XPAP23025 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC4.74□□□□□ -1.65
XPAP23025 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.74□□□□□ -1.65
XPAP23025 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.74□□□□□ -1.65
XPAP23025 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC4.74□□□□□ -1.65
XPAP23025 MFSD4BP1-201ENST00000513330 1552 ntBASIC4.74□□□□□ -1.65
XPAP23025 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.74□□□□□ -1.65
XPAP23025 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
XPAP23025 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC4.73□□□□□ -1.65
XPAP23025 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.73□□□□□ -1.65
XPAP23025 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
XPAP23025 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.73□□□□□ -1.65
XPAP23025 AC008033.1-201ENST00000216407 1162 ntBASIC4.73□□□□□ -1.65
XPAP23025 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
XPAP23025 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
XPAP23025 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC4.73□□□□□ -1.65
XPAP23025 Y_RNA.89-201ENST00000363031 102 ntBASIC4.73□□□□□ -1.65
XPAP23025 Y_RNA.295-201ENST00000364918 102 ntBASIC4.73□□□□□ -1.65
XPAP23025 RNU6-398P-201ENST00000384143 109 ntBASIC4.73□□□□□ -1.65
XPAP23025 RNU6-878P-201ENST00000384578 110 ntBASIC4.73□□□□□ -1.65
XPAP23025 MIR124-3-201ENST00000384866 87 ntBASIC4.73□□□□□ -1.65
XPAP23025 FGF7P8-201ENST00000402994 292 ntBASIC4.73□□□□□ -1.65
XPAP23025 MRPL42P2-201ENST00000403169 426 ntBASIC4.73□□□□□ -1.65
XPAP23025 AMD1P2-201ENST00000412936 992 ntBASIC4.73□□□□□ -1.65
XPAP23025 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC4.73□□□□□ -1.65
XPAP23025 JKAMPP1-201ENST00000413804 919 ntBASIC4.73□□□□□ -1.65
XPAP23025 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC4.73□□□□□ -1.65
XPAP23025 RPL26P29-201ENST00000415623 438 ntBASIC4.73□□□□□ -1.65
XPAP23025 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC4.73□□□□□ -1.65
XPAP23025 AC140479.3-201ENST00000418944 1126 ntBASIC4.73□□□□□ -1.65
XPAP23025 RPS12P23-201ENST00000419579 400 ntBASIC4.73□□□□□ -1.65
XPAP23025 AC245028.1-201ENST00000423259 256 ntBASIC4.73□□□□□ -1.65
XPAP23025 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC4.73□□□□□ -1.65
XPAP23025 AC007283.2-201ENST00000424739 197 ntBASIC4.73□□□□□ -1.65
XPAP23025 RPL34P6-201ENST00000432390 345 ntBASIC4.73□□□□□ -1.65
XPAP23025 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC4.73□□□□□ -1.65
XPAP23025 SNRPEP8-201ENST00000442866 260 ntBASIC4.73□□□□□ -1.65
XPAP23025 AC112653.1-201ENST00000443851 386 ntBASIC4.73□□□□□ -1.65
XPAP23025 ARL2BPP10-201ENST00000446487 531 ntBASIC4.73□□□□□ -1.65
XPAP23025 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC4.73□□□□□ -1.65
XPAP23025 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.73□□□□□ -1.65
XPAP23025 AC006463.2-201ENST00000473326 348 ntBASIC4.73□□□□□ -1.65
XPAP23025 RPL12P20-201ENST00000475538 479 ntBASIC4.73□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms