Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 RNU6-507P-201ENST00000516045 100 ntBASIC4.78□□□□□ -1.64
HLA-DOAP06340 AC027309.2-201ENST00000520566 192 ntBASIC4.78□□□□□ -1.64
HLA-DOAP06340 AC118273.2-201ENST00000532092 465 ntBASIC4.78□□□□□ -1.64
HLA-DOAP06340 OR6C73P-201ENST00000546432 358 ntBASIC4.78□□□□□ -1.64
HLA-DOAP06340 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC4.78□□□□□ -1.64
HLA-DOAP06340 WDR61-205ENST00000558459 884 ntTSL 3 BASIC4.78□□□□□ -1.64
HLA-DOAP06340 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC4.78□□□□□ -1.64
HLA-DOAP06340 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC4.78□□□□□ -1.64
HLA-DOAP06340 VN1R84P-201ENST00000593697 235 ntBASIC4.78□□□□□ -1.64
HLA-DOAP06340 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC4.78□□□□□ -1.64
HLA-DOAP06340 BNIP3P33-201ENST00000598912 569 ntBASIC4.78□□□□□ -1.64
HLA-DOAP06340 AP000907.4-201ENST00000604143 237 ntBASIC4.78□□□□□ -1.64
HLA-DOAP06340 AL022154.1-201ENST00000604698 785 ntBASIC4.78□□□□□ -1.64
HLA-DOAP06340 AP001521.1-201ENST00000609150 300 ntBASIC4.78□□□□□ -1.64
HLA-DOAP06340 AC131902.3-201ENST00000611767 581 ntBASIC4.78□□□□□ -1.64
HLA-DOAP06340 AC064801.1-201ENST00000612025 407 ntBASIC4.78□□□□□ -1.64
HLA-DOAP06340 AL158209.2-201ENST00000619266 216 ntBASIC4.78□□□□□ -1.64
HLA-DOAP06340 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC4.78□□□□□ -1.64
HLA-DOAP06340 AC104985.2-201ENST00000620598 500 ntBASIC4.78□□□□□ -1.64
HLA-DOAP06340 PACRG-211ENST00000621363 360 ntTSL 5 BASIC4.78□□□□□ -1.64
HLA-DOAP06340 AC099654.14-201ENST00000638599 341 ntBASIC4.78□□□□□ -1.64
HLA-DOAP06340 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.78□□□□□ -1.64
HLA-DOAP06340 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.78□□□□□ -1.64
HLA-DOAP06340 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.78□□□□□ -1.64
HLA-DOAP06340 CYP1D1P-201ENST00000416662 1433 ntBASIC4.78□□□□□ -1.64
HLA-DOAP06340 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.78□□□□□ -1.64
HLA-DOAP06340 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
HLA-DOAP06340 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
HLA-DOAP06340 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
HLA-DOAP06340 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
HLA-DOAP06340 DBF4P1-201ENST00000412976 1892 ntBASIC4.77□□□□□ -1.65
HLA-DOAP06340 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
HLA-DOAP06340 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.77□□□□□ -1.65
HLA-DOAP06340 AC105074.1-201ENST00000623380 3095 ntBASIC4.77□□□□□ -1.65
HLA-DOAP06340 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.77□□□□□ -1.65
HLA-DOAP06340 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC4.77□□□□□ -1.65
HLA-DOAP06340 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
HLA-DOAP06340 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
HLA-DOAP06340 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
HLA-DOAP06340 RNU6-251P-201ENST00000363235 104 ntBASIC4.77□□□□□ -1.65
HLA-DOAP06340 RPS24P12-201ENST00000402084 394 ntBASIC4.77□□□□□ -1.65
HLA-DOAP06340 HDGFP1-201ENST00000405943 252 ntBASIC4.77□□□□□ -1.65
HLA-DOAP06340 CCNG1P1-201ENST00000406783 885 ntBASIC4.77□□□□□ -1.65
HLA-DOAP06340 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.77□□□□□ -1.65
HLA-DOAP06340 GNG5P5-201ENST00000420444 220 ntBASIC4.77□□□□□ -1.65
HLA-DOAP06340 RPS27AP14-201ENST00000422868 454 ntBASIC4.77□□□□□ -1.65
HLA-DOAP06340 PDSS1P1-201ENST00000422953 1114 ntBASIC4.77□□□□□ -1.65
HLA-DOAP06340 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC4.77□□□□□ -1.65
HLA-DOAP06340 TRAPPC2P5-201ENST00000426293 308 ntBASIC4.77□□□□□ -1.65
HLA-DOAP06340 ZYG11AP1-201ENST00000430329 837 ntBASIC4.77□□□□□ -1.65
HLA-DOAP06340 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC4.77□□□□□ -1.65
HLA-DOAP06340 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC4.77□□□□□ -1.65
HLA-DOAP06340 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
HLA-DOAP06340 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.77□□□□□ -1.65
HLA-DOAP06340 TBCAP1-201ENST00000436520 327 ntBASIC4.77□□□□□ -1.65
HLA-DOAP06340 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC4.77□□□□□ -1.65
HLA-DOAP06340 RPS11P1-201ENST00000451072 473 ntBASIC4.77□□□□□ -1.65
HLA-DOAP06340 RPL26P28-201ENST00000451325 435 ntBASIC4.77□□□□□ -1.65
HLA-DOAP06340 RGS5-217ENST00000451759 835 ntTSL 3 BASIC4.77□□□□□ -1.65
HLA-DOAP06340 AC092001.1-201ENST00000453012 261 ntBASIC4.77□□□□□ -1.65
HLA-DOAP06340 AC013267.1-201ENST00000458227 267 ntBASIC4.77□□□□□ -1.65
HLA-DOAP06340 RPS3AP17-201ENST00000472594 777 ntBASIC4.77□□□□□ -1.65
HLA-DOAP06340 LARP1BP2-201ENST00000486594 519 ntBASIC4.77□□□□□ -1.65
HLA-DOAP06340 AP002812.1-201ENST00000495378 474 ntBASIC4.77□□□□□ -1.65
HLA-DOAP06340 AC091133.4-201ENST00000511142 308 ntBASIC4.77□□□□□ -1.65
HLA-DOAP06340 AC114781.4-201ENST00000513707 639 ntBASIC4.77□□□□□ -1.65
HLA-DOAP06340 snoU109.6-201ENST00000516831 118 ntBASIC4.77□□□□□ -1.65
HLA-DOAP06340 PAICSP4-201ENST00000517543 1253 ntBASIC4.77□□□□□ -1.65
HLA-DOAP06340 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.77□□□□□ -1.65
HLA-DOAP06340 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC4.77□□□□□ -1.65
HLA-DOAP06340 CENPUP2-201ENST00000555897 1186 ntBASIC4.77□□□□□ -1.65
HLA-DOAP06340 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.77□□□□□ -1.65
HLA-DOAP06340 AC017100.2-201ENST00000584628 355 ntBASIC4.77□□□□□ -1.65
HLA-DOAP06340 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC4.77□□□□□ -1.65
HLA-DOAP06340 AC233280.2-201ENST00000603917 1070 ntBASIC4.77□□□□□ -1.65
HLA-DOAP06340 AL161729.4-201ENST00000604650 476 ntBASIC4.77□□□□□ -1.65
HLA-DOAP06340 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
HLA-DOAP06340 AC008250.2-201ENST00000615261 205 ntBASIC4.77□□□□□ -1.65
HLA-DOAP06340 AC074140.1-201ENST00000621617 208 ntBASIC4.77□□□□□ -1.65
HLA-DOAP06340 AL354798.1-201ENST00000622505 329 ntBASIC4.77□□□□□ -1.65
HLA-DOAP06340 AC231657.1-201ENST00000624313 397 ntBASIC4.77□□□□□ -1.65
HLA-DOAP06340 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC4.77□□□□□ -1.65
HLA-DOAP06340 MIR3688-2-201ENST00000636963 87 ntBASIC4.77□□□□□ -1.65
HLA-DOAP06340 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC4.77□□□□□ -1.65
HLA-DOAP06340 AC099654.10-201ENST00000640395 161 ntBASIC4.77□□□□□ -1.65
HLA-DOAP06340 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.77□□□□□ -1.65
HLA-DOAP06340 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
HLA-DOAP06340 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC4.77□□□□□ -1.65
HLA-DOAP06340 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
HLA-DOAP06340 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
HLA-DOAP06340 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
HLA-DOAP06340 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
HLA-DOAP06340 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC4.76□□□□□ -1.65
HLA-DOAP06340 AC009313.2-201ENST00000417893 1941 ntBASIC4.76□□□□□ -1.65
HLA-DOAP06340 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
HLA-DOAP06340 SNRPEP3-201ENST00000338402 276 ntBASIC4.76□□□□□ -1.65
HLA-DOAP06340 RNU6-797P-201ENST00000363101 109 ntBASIC4.76□□□□□ -1.65
HLA-DOAP06340 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC4.76□□□□□ -1.65
HLA-DOAP06340 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC4.76□□□□□ -1.65
HLA-DOAP06340 RNU6-213P-201ENST00000384051 104 ntBASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms