Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
LCMT2O60294 PLCE1P1-201ENST00000622094 305 ntBASIC3.32□□□□□ -1.88
LCMT2O60294 RBM12B-AS1-201ENST00000623283 653 ntBASIC3.32□□□□□ -1.88
LCMT2O60294 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.32□□□□□ -1.88
LCMT2O60294 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.32□□□□□ -1.88
LCMT2O60294 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.32□□□□□ -1.88
LCMT2O60294 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
LCMT2O60294 AC138915.3-201ENST00000562908 1389 ntBASIC3.32□□□□□ -1.88
LCMT2O60294 MTND4P34-201ENST00000572715 1371 ntBASIC3.32□□□□□ -1.88
LCMT2O60294 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
LCMT2O60294 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
LCMT2O60294 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.32□□□□□ -1.88
LCMT2O60294 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
LCMT2O60294 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
LCMT2O60294 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
LCMT2O60294 AL672296.1-201ENST00000427780 2158 ntBASIC3.31□□□□□ -1.88
LCMT2O60294 ZNF826P-207ENST00000622273 1910 ntBASIC3.31□□□□□ -1.88
LCMT2O60294 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
LCMT2O60294 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC3.31□□□□□ -1.88
LCMT2O60294 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
LCMT2O60294 RNU4-35P-201ENST00000362588 141 ntBASIC3.31□□□□□ -1.88
LCMT2O60294 RNA5SP295-201ENST00000362655 121 ntBASIC3.31□□□□□ -1.88
LCMT2O60294 RNU6-251P-201ENST00000363235 104 ntBASIC3.31□□□□□ -1.88
LCMT2O60294 MIR490-201ENST00000384865 128 ntBASIC3.31□□□□□ -1.88
LCMT2O60294 MTCO3P12-201ENST00000416718 547 ntBASIC3.31□□□□□ -1.88
LCMT2O60294 AC092634.6-201ENST00000418558 192 ntBASIC3.31□□□□□ -1.88
LCMT2O60294 AC069157.1-201ENST00000421749 137 ntBASIC3.31□□□□□ -1.88
LCMT2O60294 AL158071.1-201ENST00000430315 461 ntBASIC3.31□□□□□ -1.88
LCMT2O60294 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.31□□□□□ -1.88
LCMT2O60294 SEPT7P5-201ENST00000434048 306 ntBASIC3.31□□□□□ -1.88
LCMT2O60294 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
LCMT2O60294 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.31□□□□□ -1.88
LCMT2O60294 AC127537.2-201ENST00000439258 465 ntBASIC3.31□□□□□ -1.88
LCMT2O60294 AC092641.1-201ENST00000440229 772 ntBASIC3.31□□□□□ -1.88
LCMT2O60294 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC3.31□□□□□ -1.88
LCMT2O60294 HMGB3P6-201ENST00000444896 598 ntBASIC3.31□□□□□ -1.88
LCMT2O60294 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC3.31□□□□□ -1.88
LCMT2O60294 AL357552.1-201ENST00000445254 415 ntBASIC3.31□□□□□ -1.88
LCMT2O60294 PDSS1P2-201ENST00000449397 678 ntBASIC3.31□□□□□ -1.88
LCMT2O60294 RPL26P28-201ENST00000451325 435 ntBASIC3.31□□□□□ -1.88
LCMT2O60294 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC3.31□□□□□ -1.88
LCMT2O60294 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC3.31□□□□□ -1.88
LCMT2O60294 AP000563.1-201ENST00000490865 758 ntBASIC3.31□□□□□ -1.88
LCMT2O60294 RPL21P131-201ENST00000497298 483 ntBASIC3.31□□□□□ -1.88
LCMT2O60294 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC3.31□□□□□ -1.88
LCMT2O60294 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC3.31□□□□□ -1.88
LCMT2O60294 IGKV2-26-201ENST00000518305 343 ntBASIC3.31□□□□□ -1.88
LCMT2O60294 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC3.31□□□□□ -1.88
LCMT2O60294 AP001317.1-201ENST00000531194 960 ntBASIC3.31□□□□□ -1.88
LCMT2O60294 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC3.31□□□□□ -1.88
LCMT2O60294 CCNG2P1-201ENST00000549521 1000 ntBASIC3.31□□□□□ -1.88
LCMT2O60294 AC093519.1-201ENST00000566109 298 ntBASIC3.31□□□□□ -1.88
LCMT2O60294 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC3.31□□□□□ -1.88
LCMT2O60294 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.31□□□□□ -1.88
LCMT2O60294 RN7SL339P-201ENST00000580597 296 ntBASIC3.31□□□□□ -1.88
LCMT2O60294 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC3.31□□□□□ -1.88
LCMT2O60294 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.31□□□□□ -1.88
LCMT2O60294 MTCO2P2-201ENST00000591258 225 ntBASIC3.31□□□□□ -1.88
LCMT2O60294 AC128687.1-201ENST00000605304 619 ntBASIC3.31□□□□□ -1.88
LCMT2O60294 PWAR6-201ENST00000552334 4618 ntBASIC3.31□□□□□ -1.88
LCMT2O60294 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
LCMT2O60294 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.31□□□□□ -1.88
LCMT2O60294 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.31□□□□□ -1.88
LCMT2O60294 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.31□□□□□ -1.88
LCMT2O60294 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
LCMT2O60294 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
LCMT2O60294 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
LCMT2O60294 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
LCMT2O60294 RNU6-730P-201ENST00000383954 104 ntBASIC3.3□□□□□ -1.88
LCMT2O60294 TMSB4XP8-201ENST00000402089 135 ntBASIC3.3□□□□□ -1.88
LCMT2O60294 RNU6-584P-201ENST00000410350 95 ntBASIC3.3□□□□□ -1.88
LCMT2O60294 TMSB4XP6-201ENST00000415187 135 ntBASIC3.3□□□□□ -1.88
LCMT2O60294 LUZP4P1-201ENST00000415420 344 ntBASIC3.3□□□□□ -1.88
LCMT2O60294 RPS7P15-201ENST00000415804 584 ntBASIC3.3□□□□□ -1.88
LCMT2O60294 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC3.3□□□□□ -1.88
LCMT2O60294 KRR1P1-201ENST00000419430 803 ntBASIC3.3□□□□□ -1.88
LCMT2O60294 RPF2P1-201ENST00000424137 906 ntBASIC3.3□□□□□ -1.88
LCMT2O60294 TMSB4XP1-201ENST00000424567 135 ntBASIC3.3□□□□□ -1.88
LCMT2O60294 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC3.3□□□□□ -1.88
LCMT2O60294 OFD1P12Y-201ENST00000427963 1207 ntBASIC3.3□□□□□ -1.88
LCMT2O60294 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
LCMT2O60294 OFD1P13Y-201ENST00000431179 1232 ntBASIC3.3□□□□□ -1.88
LCMT2O60294 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC3.3□□□□□ -1.88
LCMT2O60294 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.3□□□□□ -1.88
LCMT2O60294 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
LCMT2O60294 SLC31A1P1-201ENST00000451221 567 ntBASIC3.3□□□□□ -1.88
LCMT2O60294 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
LCMT2O60294 TRBV26-201ENST00000456572 344 ntBASIC3.3□□□□□ -1.88
LCMT2O60294 RN7SL293P-201ENST00000481765 281 ntBASIC3.3□□□□□ -1.88
LCMT2O60294 ACTG1P13-201ENST00000486987 1043 ntBASIC3.3□□□□□ -1.88
LCMT2O60294 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC3.3□□□□□ -1.88
LCMT2O60294 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.3□□□□□ -1.88
LCMT2O60294 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC3.3□□□□□ -1.88
LCMT2O60294 SLC25A15P5-201ENST00000508033 253 ntBASIC3.3□□□□□ -1.88
LCMT2O60294 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC3.3□□□□□ -1.88
LCMT2O60294 SNORA48.10-201ENST00000516965 160 ntBASIC3.3□□□□□ -1.88
LCMT2O60294 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC3.3□□□□□ -1.88
LCMT2O60294 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC3.3□□□□□ -1.88
LCMT2O60294 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.3□□□□□ -1.88
LCMT2O60294 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms