Protein–RNA interactions for Protein: O15259

NPHP1, Nephrocystin-1, humanhuman

Predictions only

Length 732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1O15259 RPS17P13-201ENST00000448974 407 ntBASIC4.65□□□□□ -1.67
NPHP1O15259 RPL12P26-201ENST00000452430 487 ntBASIC4.65□□□□□ -1.67
NPHP1O15259 RPL21P134-201ENST00000453468 483 ntBASIC4.65□□□□□ -1.67
NPHP1O15259 MTCO3P35-201ENST00000485582 781 ntBASIC4.65□□□□□ -1.67
NPHP1O15259 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC4.65□□□□□ -1.67
NPHP1O15259 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
NPHP1O15259 AC109458.1-201ENST00000508858 316 ntBASIC4.65□□□□□ -1.67
NPHP1O15259 AC079395.1-201ENST00000510981 262 ntBASIC4.65□□□□□ -1.67
NPHP1O15259 RAC1P2-201ENST00000511164 579 ntBASIC4.65□□□□□ -1.67
NPHP1O15259 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.65□□□□□ -1.67
NPHP1O15259 RN7SKP57-201ENST00000517248 293 ntBASIC4.65□□□□□ -1.67
NPHP1O15259 AC103843.2-201ENST00000530523 682 ntBASIC4.65□□□□□ -1.67
NPHP1O15259 AC109635.4-202ENST00000531666 412 ntBASIC4.65□□□□□ -1.67
NPHP1O15259 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC4.65□□□□□ -1.67
NPHP1O15259 AC007458.1-201ENST00000542812 373 ntBASIC4.65□□□□□ -1.67
NPHP1O15259 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC4.65□□□□□ -1.67
NPHP1O15259 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
NPHP1O15259 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC4.65□□□□□ -1.67
NPHP1O15259 AC090695.1-201ENST00000561269 1222 ntBASIC4.65□□□□□ -1.67
NPHP1O15259 OR4K7P-201ENST00000580232 945 ntBASIC4.65□□□□□ -1.67
NPHP1O15259 AC011471.1-201ENST00000585766 187 ntBASIC4.65□□□□□ -1.67
NPHP1O15259 AC020914.4-201ENST00000597690 277 ntBASIC4.65□□□□□ -1.67
NPHP1O15259 SNORA62.6-201ENST00000606322 83 ntBASIC4.65□□□□□ -1.67
NPHP1O15259 RNU1-30P-201ENST00000606575 163 ntBASIC4.65□□□□□ -1.67
NPHP1O15259 AP000240.1-201ENST00000609910 452 ntBASIC4.65□□□□□ -1.67
NPHP1O15259 AL355365.1-201ENST00000616480 294 ntBASIC4.65□□□□□ -1.67
NPHP1O15259 AC006963.1-201ENST00000624003 1052 ntBASIC4.65□□□□□ -1.67
NPHP1O15259 MIR3651-201ENST00000630427 90 ntBASIC4.65□□□□□ -1.67
NPHP1O15259 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.67
NPHP1O15259 AC007823.1-201ENST00000569932 1566 ntBASIC4.65□□□□□ -1.67
NPHP1O15259 AL049780.3-201ENST00000624612 1583 ntBASIC4.65□□□□□ -1.67
NPHP1O15259 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC4.65□□□□□ -1.67
NPHP1O15259 AL365440.1-201ENST00000436135 2167 ntBASIC4.64□□□□□ -1.67
NPHP1O15259 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC4.64□□□□□ -1.67
NPHP1O15259 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC4.64□□□□□ -1.67
NPHP1O15259 SNORD9-201ENST00000362566 104 ntBASIC4.64□□□□□ -1.67
NPHP1O15259 SNORA51.2-201ENST00000364595 132 ntBASIC4.64□□□□□ -1.67
NPHP1O15259 SNORD51-201ENST00000384320 80 ntBASIC4.64□□□□□ -1.67
NPHP1O15259 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
NPHP1O15259 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
NPHP1O15259 HSPE1P26-201ENST00000405341 275 ntBASIC4.64□□□□□ -1.67
NPHP1O15259 RNU6-712P-201ENST00000410558 100 ntBASIC4.64□□□□□ -1.67
NPHP1O15259 RNU2-15P-201ENST00000410692 191 ntBASIC4.64□□□□□ -1.67
NPHP1O15259 RAD23BP2-201ENST00000416003 1207 ntBASIC4.64□□□□□ -1.67
NPHP1O15259 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC4.64□□□□□ -1.67
NPHP1O15259 PSMA6P3-201ENST00000428242 164 ntBASIC4.64□□□□□ -1.67
NPHP1O15259 AC084290.1-201ENST00000434995 374 ntBASIC4.64□□□□□ -1.67
NPHP1O15259 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
NPHP1O15259 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC4.64□□□□□ -1.67
NPHP1O15259 PTENP1-201ENST00000447117 1215 ntBASIC4.64□□□□□ -1.67
NPHP1O15259 OFD1P3Y-201ENST00000453312 783 ntBASIC4.64□□□□□ -1.67
NPHP1O15259 RPL9P32-201ENST00000464118 620 ntBASIC4.64□□□□□ -1.67
NPHP1O15259 RPS4XP10-201ENST00000465034 731 ntBASIC4.64□□□□□ -1.67
NPHP1O15259 AC010285.1-201ENST00000470580 392 ntBASIC4.64□□□□□ -1.67
NPHP1O15259 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
NPHP1O15259 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC4.64□□□□□ -1.67
NPHP1O15259 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC4.64□□□□□ -1.67
NPHP1O15259 MTCYBP17-201ENST00000503579 789 ntBASIC4.64□□□□□ -1.67
NPHP1O15259 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC4.64□□□□□ -1.67
NPHP1O15259 TMEM251P1-201ENST00000503717 318 ntBASIC4.64□□□□□ -1.67
NPHP1O15259 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC4.64□□□□□ -1.67
NPHP1O15259 GMPSP1-201ENST00000514075 579 ntBASIC4.64□□□□□ -1.67
NPHP1O15259 RNU6-583P-201ENST00000516012 92 ntBASIC4.64□□□□□ -1.67
NPHP1O15259 RNY4P37-201ENST00000516225 96 ntBASIC4.64□□□□□ -1.67
NPHP1O15259 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC4.64□□□□□ -1.67
NPHP1O15259 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC4.64□□□□□ -1.67
NPHP1O15259 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC4.64□□□□□ -1.67
NPHP1O15259 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC4.64□□□□□ -1.67
NPHP1O15259 AL121603.1-201ENST00000553815 142 ntBASIC4.64□□□□□ -1.67
NPHP1O15259 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC4.64□□□□□ -1.67
NPHP1O15259 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC4.64□□□□□ -1.67
NPHP1O15259 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC4.64□□□□□ -1.67
NPHP1O15259 MIR3690-201ENST00000580266 75 ntBASIC4.64□□□□□ -1.67
NPHP1O15259 MAGOH2P-202ENST00000584384 429 ntBASIC4.64□□□□□ -1.67
NPHP1O15259 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC4.64□□□□□ -1.67
NPHP1O15259 AC006116.10-201ENST00000591836 581 ntBASIC4.64□□□□□ -1.67
NPHP1O15259 AC020914.6-201ENST00000594327 272 ntBASIC4.64□□□□□ -1.67
NPHP1O15259 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC4.64□□□□□ -1.67
NPHP1O15259 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC4.64□□□□□ -1.67
NPHP1O15259 MIR7851-201ENST00000610611 160 ntBASIC4.64□□□□□ -1.67
NPHP1O15259 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC4.64□□□□□ -1.67
NPHP1O15259 AC243773.3-201ENST00000613270 256 ntBASIC4.64□□□□□ -1.67
NPHP1O15259 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC4.64□□□□□ -1.67
NPHP1O15259 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC4.64□□□□□ -1.67
NPHP1O15259 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
NPHP1O15259 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
NPHP1O15259 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
NPHP1O15259 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC4.63□□□□□ -1.67
NPHP1O15259 CRP-202ENST00000368110 667 ntTSL 3 BASIC4.63□□□□□ -1.67
NPHP1O15259 RNA5SP424-201ENST00000390988 115 ntBASIC4.63□□□□□ -1.67
NPHP1O15259 AC092447.6-201ENST00000414578 210 ntBASIC4.63□□□□□ -1.67
NPHP1O15259 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC4.63□□□□□ -1.67
NPHP1O15259 AC127526.1-201ENST00000417526 366 ntBASIC4.63□□□□□ -1.67
NPHP1O15259 ELOCP9-201ENST00000418624 239 ntBASIC4.63□□□□□ -1.67
NPHP1O15259 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC4.63□□□□□ -1.67
NPHP1O15259 ATP5F1P1-201ENST00000433775 569 ntBASIC4.63□□□□□ -1.67
NPHP1O15259 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC4.63□□□□□ -1.67
NPHP1O15259 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC4.63□□□□□ -1.67
NPHP1O15259 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC4.63□□□□□ -1.67
NPHP1O15259 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC4.63□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 76.4 ms