Protein–RNA interactions for Protein: A6NDI0

TRIM49B, Putative tripartite motif-containing protein 49B, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49BA6NDI0 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC3.61□□□□□ -1.83
TRIM49BA6NDI0 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC3.61□□□□□ -1.83
TRIM49BA6NDI0 MTCO1P40-201ENST00000574371 625 ntBASIC3.61□□□□□ -1.83
TRIM49BA6NDI0 MIR5186-201ENST00000577504 120 ntBASIC3.61□□□□□ -1.83
TRIM49BA6NDI0 MIR4276-201ENST00000584832 70 ntBASIC3.61□□□□□ -1.83
TRIM49BA6NDI0 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC3.61□□□□□ -1.83
TRIM49BA6NDI0 PART1_2.1-201ENST00000612397 250 ntBASIC3.61□□□□□ -1.83
TRIM49BA6NDI0 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
TRIM49BA6NDI0 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC3.61□□□□□ -1.83
TRIM49BA6NDI0 AC244100.1-202ENST00000621554 382 ntBASIC3.61□□□□□ -1.83
TRIM49BA6NDI0 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.61□□□□□ -1.83
TRIM49BA6NDI0 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
TRIM49BA6NDI0 SRP72P2-201ENST00000344851 1979 ntBASIC3.61□□□□□ -1.83
TRIM49BA6NDI0 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
TRIM49BA6NDI0 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.61□□□□□ -1.83
TRIM49BA6NDI0 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
TRIM49BA6NDI0 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
TRIM49BA6NDI0 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.61□□□□□ -1.83
TRIM49BA6NDI0 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.61□□□□□ -1.83
TRIM49BA6NDI0 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.6□□□□□ -1.83
TRIM49BA6NDI0 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
TRIM49BA6NDI0 RNU6-263P-201ENST00000363811 107 ntBASIC3.6□□□□□ -1.83
TRIM49BA6NDI0 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.6□□□□□ -1.83
TRIM49BA6NDI0 RNA5SP56-201ENST00000410277 118 ntBASIC3.6□□□□□ -1.83
TRIM49BA6NDI0 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.6□□□□□ -1.83
TRIM49BA6NDI0 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.6□□□□□ -1.83
TRIM49BA6NDI0 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC3.6□□□□□ -1.83
TRIM49BA6NDI0 AL031313.1-201ENST00000448435 256 ntBASIC3.6□□□□□ -1.83
TRIM49BA6NDI0 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.6□□□□□ -1.83
TRIM49BA6NDI0 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC3.6□□□□□ -1.83
TRIM49BA6NDI0 RPL7P15-201ENST00000461190 712 ntBASIC3.6□□□□□ -1.83
TRIM49BA6NDI0 PRDX3P4-201ENST00000470828 747 ntBASIC3.6□□□□□ -1.83
TRIM49BA6NDI0 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.6□□□□□ -1.83
TRIM49BA6NDI0 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.6□□□□□ -1.83
TRIM49BA6NDI0 ACTR3BP4-201ENST00000503033 1244 ntBASIC3.6□□□□□ -1.83
TRIM49BA6NDI0 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
TRIM49BA6NDI0 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC3.6□□□□□ -1.83
TRIM49BA6NDI0 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC3.6□□□□□ -1.83
TRIM49BA6NDI0 NDUFS5P6-201ENST00000529136 295 ntBASIC3.6□□□□□ -1.83
TRIM49BA6NDI0 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC3.6□□□□□ -1.83
TRIM49BA6NDI0 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.6□□□□□ -1.83
TRIM49BA6NDI0 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC3.6□□□□□ -1.83
TRIM49BA6NDI0 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC3.6□□□□□ -1.83
TRIM49BA6NDI0 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.6□□□□□ -1.83
TRIM49BA6NDI0 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC3.6□□□□□ -1.83
TRIM49BA6NDI0 RPL21P12-201ENST00000559810 515 ntBASIC3.6□□□□□ -1.83
TRIM49BA6NDI0 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.6□□□□□ -1.83
TRIM49BA6NDI0 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.6□□□□□ -1.83
TRIM49BA6NDI0 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC3.6□□□□□ -1.83
TRIM49BA6NDI0 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.6□□□□□ -1.83
TRIM49BA6NDI0 AC005412.1-201ENST00000580812 1049 ntBASIC3.6□□□□□ -1.83
TRIM49BA6NDI0 AL669831.4-202ENST00000590817 238 ntBASIC3.6□□□□□ -1.83
TRIM49BA6NDI0 VN1R87P-201ENST00000596706 487 ntBASIC3.6□□□□□ -1.83
TRIM49BA6NDI0 AC025588.3-201ENST00000604182 274 ntBASIC3.6□□□□□ -1.83
TRIM49BA6NDI0 Z99289.3-201ENST00000605586 594 ntBASIC3.6□□□□□ -1.83
TRIM49BA6NDI0 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.6□□□□□ -1.83
TRIM49BA6NDI0 AC024060.1-201ENST00000607052 494 ntBASIC3.6□□□□□ -1.83
TRIM49BA6NDI0 AC069200.1-201ENST00000609511 323 ntBASIC3.6□□□□□ -1.83
TRIM49BA6NDI0 AL590282.1-201ENST00000610379 1136 ntBASIC3.6□□□□□ -1.83
TRIM49BA6NDI0 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
TRIM49BA6NDI0 AL354976.1-201ENST00000613843 387 ntBASIC3.6□□□□□ -1.83
TRIM49BA6NDI0 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC3.6□□□□□ -1.83
TRIM49BA6NDI0 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.6□□□□□ -1.83
TRIM49BA6NDI0 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
TRIM49BA6NDI0 AC111188.2-201ENST00000529697 1387 ntBASIC3.6□□□□□ -1.83
TRIM49BA6NDI0 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
TRIM49BA6NDI0 PCF11-AS1-201ENST00000602322 1516 ntBASIC3.6□□□□□ -1.83
TRIM49BA6NDI0 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.59□□□□□ -1.83
TRIM49BA6NDI0 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.59□□□□□ -1.83
TRIM49BA6NDI0 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
TRIM49BA6NDI0 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.59□□□□□ -1.83
TRIM49BA6NDI0 RNU6-921P-201ENST00000384361 107 ntBASIC3.59□□□□□ -1.83
TRIM49BA6NDI0 AL121978.1-201ENST00000402778 359 ntBASIC3.59□□□□□ -1.83
TRIM49BA6NDI0 RNU4-78P-201ENST00000410940 126 ntBASIC3.59□□□□□ -1.83
TRIM49BA6NDI0 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.59□□□□□ -1.83
TRIM49BA6NDI0 AC245291.1-201ENST00000419501 328 ntBASIC3.59□□□□□ -1.83
TRIM49BA6NDI0 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC3.59□□□□□ -1.83
TRIM49BA6NDI0 AC092634.2-201ENST00000428146 1010 ntBASIC3.59□□□□□ -1.83
TRIM49BA6NDI0 MTND2P5-201ENST00000432656 1006 ntBASIC3.59□□□□□ -1.83
TRIM49BA6NDI0 HSD52-202ENST00000436225 772 ntTSL 3 BASIC3.59□□□□□ -1.83
TRIM49BA6NDI0 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC3.59□□□□□ -1.83
TRIM49BA6NDI0 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC3.59□□□□□ -1.83
TRIM49BA6NDI0 AL662791.1-201ENST00000441992 928 ntBASIC3.59□□□□□ -1.83
TRIM49BA6NDI0 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC3.59□□□□□ -1.83
TRIM49BA6NDI0 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.59□□□□□ -1.83
TRIM49BA6NDI0 SEPT14P24-201ENST00000447236 180 ntBASIC3.59□□□□□ -1.83
TRIM49BA6NDI0 AC004022.1-201ENST00000447766 1066 ntBASIC3.59□□□□□ -1.83
TRIM49BA6NDI0 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC3.59□□□□□ -1.83
TRIM49BA6NDI0 AC091951.3-201ENST00000504093 246 ntBASIC3.59□□□□□ -1.83
TRIM49BA6NDI0 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.59□□□□□ -1.83
TRIM49BA6NDI0 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC3.59□□□□□ -1.83
TRIM49BA6NDI0 RNU6-1028P-201ENST00000517164 93 ntBASIC3.59□□□□□ -1.83
TRIM49BA6NDI0 PTK2-220ENST00000520151 573 ntTSL 4 BASIC3.59□□□□□ -1.83
TRIM49BA6NDI0 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC3.59□□□□□ -1.83
TRIM49BA6NDI0 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.59□□□□□ -1.83
TRIM49BA6NDI0 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC3.59□□□□□ -1.83
TRIM49BA6NDI0 AC023813.2-201ENST00000564321 469 ntBASIC3.59□□□□□ -1.83
TRIM49BA6NDI0 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC3.59□□□□□ -1.83
TRIM49BA6NDI0 AC015688.2-201ENST00000584523 262 ntBASIC3.59□□□□□ -1.83
TRIM49BA6NDI0 GAS5-AS1-201ENST00000602767 694 ntBASIC3.59□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 95.1 ms