Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 AC109327.1-201ENST00000471666 403 ntBASIC4.17□□□□□ -1.74
LRFN1Q9P244 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
LRFN1Q9P244 AC068724.1-201ENST00000487100 792 ntBASIC4.17□□□□□ -1.74
LRFN1Q9P244 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC4.17□□□□□ -1.74
LRFN1Q9P244 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC4.17□□□□□ -1.74
LRFN1Q9P244 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC4.17□□□□□ -1.74
LRFN1Q9P244 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC4.17□□□□□ -1.74
LRFN1Q9P244 AC021146.1-201ENST00000511202 716 ntBASIC4.17□□□□□ -1.74
LRFN1Q9P244 AC091965.2-201ENST00000512324 613 ntBASIC4.17□□□□□ -1.74
LRFN1Q9P244 RNU6-201P-201ENST00000517100 61 ntBASIC4.17□□□□□ -1.74
LRFN1Q9P244 AC007115.1-201ENST00000546853 234 ntBASIC4.17□□□□□ -1.74
LRFN1Q9P244 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC4.17□□□□□ -1.74
LRFN1Q9P244 AC068831.4-201ENST00000556118 109 ntBASIC4.17□□□□□ -1.74
LRFN1Q9P244 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC4.17□□□□□ -1.74
LRFN1Q9P244 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC4.17□□□□□ -1.74
LRFN1Q9P244 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC4.17□□□□□ -1.74
LRFN1Q9P244 AC060771.1-201ENST00000582031 164 ntBASIC4.17□□□□□ -1.74
LRFN1Q9P244 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
LRFN1Q9P244 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.17□□□□□ -1.74
LRFN1Q9P244 AC073544.2-201ENST00000601155 540 ntBASIC4.17□□□□□ -1.74
LRFN1Q9P244 AL158211.4-201ENST00000606988 584 ntBASIC4.17□□□□□ -1.74
LRFN1Q9P244 AC091979.2-201ENST00000607514 214 ntBASIC4.17□□□□□ -1.74
LRFN1Q9P244 AC138749.5-201ENST00000611461 208 ntBASIC4.17□□□□□ -1.74
LRFN1Q9P244 AC116165.2-201ENST00000616705 206 ntBASIC4.17□□□□□ -1.74
LRFN1Q9P244 AL360181.4-201ENST00000621752 134 ntBASIC4.17□□□□□ -1.74
LRFN1Q9P244 AC244258.1-201ENST00000637553 1071 ntBASIC4.17□□□□□ -1.74
LRFN1Q9P244 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
LRFN1Q9P244 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
LRFN1Q9P244 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
LRFN1Q9P244 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.17□□□□□ -1.74
LRFN1Q9P244 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
LRFN1Q9P244 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
LRFN1Q9P244 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
LRFN1Q9P244 AL133243.3-201ENST00000617415 3004 ntBASIC4.16□□□□□ -1.74
LRFN1Q9P244 MTCO1P9-201ENST00000505577 1534 ntBASIC4.16□□□□□ -1.74
LRFN1Q9P244 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.16□□□□□ -1.74
LRFN1Q9P244 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
LRFN1Q9P244 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC4.16□□□□□ -1.74
LRFN1Q9P244 AC027290.2-201ENST00000623210 18662 ntBASIC4.16□□□□□ -1.74
LRFN1Q9P244 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.16□□□□□ -1.74
LRFN1Q9P244 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
LRFN1Q9P244 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
LRFN1Q9P244 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.16□□□□□ -1.74
LRFN1Q9P244 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.16□□□□□ -1.74
LRFN1Q9P244 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
LRFN1Q9P244 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
LRFN1Q9P244 Y_RNA.201-201ENST00000364052 96 ntBASIC4.16□□□□□ -1.74
LRFN1Q9P244 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
LRFN1Q9P244 Y_RNA.608-201ENST00000410647 95 ntBASIC4.16□□□□□ -1.74
LRFN1Q9P244 MTND1P21-201ENST00000412991 285 ntBASIC4.16□□□□□ -1.74
LRFN1Q9P244 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC4.16□□□□□ -1.74
LRFN1Q9P244 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.16□□□□□ -1.74
LRFN1Q9P244 DUTP6-201ENST00000425573 462 ntBASIC4.16□□□□□ -1.74
LRFN1Q9P244 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC4.16□□□□□ -1.74
LRFN1Q9P244 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC4.16□□□□□ -1.74
LRFN1Q9P244 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC4.16□□□□□ -1.74
LRFN1Q9P244 MTND1P28-201ENST00000435623 950 ntBASIC4.16□□□□□ -1.74
LRFN1Q9P244 AL121871.1-201ENST00000443413 436 ntBASIC4.16□□□□□ -1.74
LRFN1Q9P244 AL360221.1-201ENST00000445989 335 ntBASIC4.16□□□□□ -1.74
LRFN1Q9P244 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC4.16□□□□□ -1.74
LRFN1Q9P244 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC4.16□□□□□ -1.74
LRFN1Q9P244 AL590365.1-201ENST00000450788 243 ntBASIC4.16□□□□□ -1.74
LRFN1Q9P244 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC4.16□□□□□ -1.74
LRFN1Q9P244 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC4.16□□□□□ -1.74
LRFN1Q9P244 SNRPGP5-201ENST00000456003 220 ntBASIC4.16□□□□□ -1.74
LRFN1Q9P244 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
LRFN1Q9P244 MTCO2P18-201ENST00000457151 658 ntBASIC4.16□□□□□ -1.74
LRFN1Q9P244 AL445433.1-201ENST00000457507 257 ntBASIC4.16□□□□□ -1.74
LRFN1Q9P244 TPTE2P5-203ENST00000458118 728 ntBASIC4.16□□□□□ -1.74
LRFN1Q9P244 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
LRFN1Q9P244 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC4.16□□□□□ -1.74
LRFN1Q9P244 AC004069.2-201ENST00000505438 1114 ntBASIC4.16□□□□□ -1.74
LRFN1Q9P244 AC091435.1-201ENST00000505442 584 ntBASIC4.16□□□□□ -1.74
LRFN1Q9P244 AF131216.2-201ENST00000512316 564 ntBASIC4.16□□□□□ -1.74
LRFN1Q9P244 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC4.16□□□□□ -1.74
LRFN1Q9P244 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC4.16□□□□□ -1.74
LRFN1Q9P244 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC4.16□□□□□ -1.74
LRFN1Q9P244 BNIP3P5-201ENST00000562290 498 ntBASIC4.16□□□□□ -1.74
LRFN1Q9P244 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC4.16□□□□□ -1.74
LRFN1Q9P244 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC4.16□□□□□ -1.74
LRFN1Q9P244 MIR548AB-201ENST00000584917 84 ntBASIC4.16□□□□□ -1.74
LRFN1Q9P244 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.16□□□□□ -1.74
LRFN1Q9P244 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC4.16□□□□□ -1.74
LRFN1Q9P244 AP001429.1-201ENST00000602568 530 ntBASIC4.16□□□□□ -1.74
LRFN1Q9P244 AC239868.4-201ENST00000608318 671 ntBASIC4.16□□□□□ -1.74
LRFN1Q9P244 AC012150.2-201ENST00000621300 544 ntBASIC4.16□□□□□ -1.74
LRFN1Q9P244 AC009268.2-201ENST00000621925 457 ntBASIC4.16□□□□□ -1.74
LRFN1Q9P244 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.16□□□□□ -1.74
LRFN1Q9P244 AC067931.1-201ENST00000624190 671 ntBASIC4.16□□□□□ -1.74
LRFN1Q9P244 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.16□□□□□ -1.74
LRFN1Q9P244 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
LRFN1Q9P244 OSBPL9P4-201ENST00000371707 1800 ntBASIC4.16□□□□□ -1.74
LRFN1Q9P244 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
LRFN1Q9P244 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
LRFN1Q9P244 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.16□□□□□ -1.74
LRFN1Q9P244 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.16□□□□□ -1.74
LRFN1Q9P244 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC4.16□□□□□ -1.74
LRFN1Q9P244 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
LRFN1Q9P244 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
LRFN1Q9P244 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 116.7 ms