Protein–RNA interactions for Protein: Q9NZR4

VSX1, Visual system homeobox 1, humanhuman

Predicted RBP Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1Q9NZR4 LAP3P1-201ENST00000403648 294 ntBASIC4.31□□□□□ -1.72
VSX1Q9NZR4 MRM2-202ENST00000407040 582 ntTSL 3 BASIC4.31□□□□□ -1.72
VSX1Q9NZR4 MIR1250-201ENST00000408098 113 ntBASIC4.31□□□□□ -1.72
VSX1Q9NZR4 RNU2-62P-201ENST00000410868 191 ntBASIC4.31□□□□□ -1.72
VSX1Q9NZR4 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC4.31□□□□□ -1.72
VSX1Q9NZR4 AL035410.1-201ENST00000427409 427 ntBASIC4.31□□□□□ -1.72
VSX1Q9NZR4 OR2B7P-201ENST00000429302 934 ntBASIC4.31□□□□□ -1.72
VSX1Q9NZR4 FABP7P2-201ENST00000429946 379 ntBASIC4.31□□□□□ -1.72
VSX1Q9NZR4 BTF3P10-201ENST00000433415 495 ntBASIC4.31□□□□□ -1.72
VSX1Q9NZR4 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
VSX1Q9NZR4 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC4.31□□□□□ -1.72
VSX1Q9NZR4 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC4.31□□□□□ -1.72
VSX1Q9NZR4 SNRPEP8-201ENST00000442866 260 ntBASIC4.31□□□□□ -1.72
VSX1Q9NZR4 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC4.31□□□□□ -1.72
VSX1Q9NZR4 AC079781.2-201ENST00000446424 169 ntBASIC4.31□□□□□ -1.72
VSX1Q9NZR4 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC4.31□□□□□ -1.72
VSX1Q9NZR4 NDUFS5P3-201ENST00000450668 321 ntBASIC4.31□□□□□ -1.72
VSX1Q9NZR4 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC4.31□□□□□ -1.72
VSX1Q9NZR4 AC018638.3-201ENST00000461273 132 ntBASIC4.31□□□□□ -1.72
VSX1Q9NZR4 RPS29P25-201ENST00000481709 171 ntBASIC4.31□□□□□ -1.72
VSX1Q9NZR4 RN7SL727P-201ENST00000482164 296 ntBASIC4.31□□□□□ -1.72
VSX1Q9NZR4 AC041039.1-201ENST00000485656 536 ntBASIC4.31□□□□□ -1.72
VSX1Q9NZR4 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC4.31□□□□□ -1.72
VSX1Q9NZR4 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC4.31□□□□□ -1.72
VSX1Q9NZR4 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC4.31□□□□□ -1.72
VSX1Q9NZR4 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC4.31□□□□□ -1.72
VSX1Q9NZR4 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.31□□□□□ -1.72
VSX1Q9NZR4 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC4.31□□□□□ -1.72
VSX1Q9NZR4 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC4.31□□□□□ -1.72
VSX1Q9NZR4 AL049839.1-201ENST00000556151 657 ntBASIC4.31□□□□□ -1.72
VSX1Q9NZR4 AC087477.6-201ENST00000559595 843 ntBASIC4.31□□□□□ -1.72
VSX1Q9NZR4 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC4.31□□□□□ -1.72
VSX1Q9NZR4 AC090616.5-202ENST00000582111 297 ntBASIC4.31□□□□□ -1.72
VSX1Q9NZR4 AC005730.3-201ENST00000583067 366 ntBASIC4.31□□□□□ -1.72
VSX1Q9NZR4 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC4.31□□□□□ -1.72
VSX1Q9NZR4 KC877982.1-201ENST00000602313 470 ntBASIC4.31□□□□□ -1.72
VSX1Q9NZR4 RPL26P30-202ENST00000602923 645 ntBASIC4.31□□□□□ -1.72
VSX1Q9NZR4 AC007621.1-201ENST00000604544 437 ntBASIC4.31□□□□□ -1.72
VSX1Q9NZR4 AL121932.1-201ENST00000605542 214 ntBASIC4.31□□□□□ -1.72
VSX1Q9NZR4 AP001521.2-201ENST00000608772 546 ntBASIC4.31□□□□□ -1.72
VSX1Q9NZR4 AL359314.1-201ENST00000616913 261 ntBASIC4.31□□□□□ -1.72
VSX1Q9NZR4 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC4.31□□□□□ -1.72
VSX1Q9NZR4 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC4.31□□□□□ -1.72
VSX1Q9NZR4 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
VSX1Q9NZR4 MIR4496-201ENST00000635896 61 ntBASIC4.31□□□□□ -1.72
VSX1Q9NZR4 MIR6715B-201ENST00000637172 77 ntBASIC4.31□□□□□ -1.72
VSX1Q9NZR4 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.31□□□□□ -1.72
VSX1Q9NZR4 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC4.31□□□□□ -1.72
VSX1Q9NZR4 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
VSX1Q9NZR4 ZNF734P-201ENST00000419494 1534 ntBASIC4.31□□□□□ -1.72
VSX1Q9NZR4 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
VSX1Q9NZR4 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
VSX1Q9NZR4 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
VSX1Q9NZR4 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.3□□□□□ -1.72
VSX1Q9NZR4 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
VSX1Q9NZR4 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
VSX1Q9NZR4 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.3□□□□□ -1.72
VSX1Q9NZR4 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
VSX1Q9NZR4 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
VSX1Q9NZR4 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
VSX1Q9NZR4 RNU5E-1-201ENST00000362477 120 ntBASIC4.3□□□□□ -1.72
VSX1Q9NZR4 U8.4-201ENST00000363626 134 ntBASIC4.3□□□□□ -1.72
VSX1Q9NZR4 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
VSX1Q9NZR4 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
VSX1Q9NZR4 ENSAP1-201ENST00000392855 326 ntBASIC4.3□□□□□ -1.72
VSX1Q9NZR4 MTND4LP20-201ENST00000402379 270 ntBASIC4.3□□□□□ -1.72
VSX1Q9NZR4 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC4.3□□□□□ -1.72
VSX1Q9NZR4 RN7SKP125-201ENST00000410481 302 ntBASIC4.3□□□□□ -1.72
VSX1Q9NZR4 RNU2-15P-201ENST00000410692 191 ntBASIC4.3□□□□□ -1.72
VSX1Q9NZR4 HMGN1P24-201ENST00000412282 298 ntBASIC4.3□□□□□ -1.72
VSX1Q9NZR4 AMD1P2-201ENST00000412936 992 ntBASIC4.3□□□□□ -1.72
VSX1Q9NZR4 SNRPFP1-201ENST00000414761 252 ntBASIC4.3□□□□□ -1.72
VSX1Q9NZR4 UQCRBP1-201ENST00000421129 336 ntBASIC4.3□□□□□ -1.72
VSX1Q9NZR4 FABP7P1-201ENST00000424004 391 ntBASIC4.3□□□□□ -1.72
VSX1Q9NZR4 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC4.3□□□□□ -1.72
VSX1Q9NZR4 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC4.3□□□□□ -1.72
VSX1Q9NZR4 MTND3P23-201ENST00000431980 347 ntBASIC4.3□□□□□ -1.72
VSX1Q9NZR4 AC093414.1-201ENST00000434712 514 ntBASIC4.3□□□□□ -1.72
VSX1Q9NZR4 AL356276.2-201ENST00000435919 558 ntBASIC4.3□□□□□ -1.72
VSX1Q9NZR4 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC4.3□□□□□ -1.72
VSX1Q9NZR4 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC4.3□□□□□ -1.72
VSX1Q9NZR4 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC4.3□□□□□ -1.72
VSX1Q9NZR4 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC4.3□□□□□ -1.72
VSX1Q9NZR4 MTND1P11-201ENST00000456661 876 ntBASIC4.3□□□□□ -1.72
VSX1Q9NZR4 RPL23AP56-201ENST00000460778 453 ntBASIC4.3□□□□□ -1.72
VSX1Q9NZR4 RN7SL629P-201ENST00000489622 285 ntBASIC4.3□□□□□ -1.72
VSX1Q9NZR4 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC4.3□□□□□ -1.72
VSX1Q9NZR4 AC016065.2-201ENST00000514530 444 ntBASIC4.3□□□□□ -1.72
VSX1Q9NZR4 RGS5-219ENST00000528019 512 ntTSL 4 BASIC4.3□□□□□ -1.72
VSX1Q9NZR4 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC4.3□□□□□ -1.72
VSX1Q9NZR4 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC4.3□□□□□ -1.72
VSX1Q9NZR4 CBX3P5-201ENST00000552017 521 ntBASIC4.3□□□□□ -1.72
VSX1Q9NZR4 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC4.3□□□□□ -1.72
VSX1Q9NZR4 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC4.3□□□□□ -1.72
VSX1Q9NZR4 MIR3167-201ENST00000579623 85 ntBASIC4.3□□□□□ -1.72
VSX1Q9NZR4 MIR3146-201ENST00000580367 79 ntBASIC4.3□□□□□ -1.72
VSX1Q9NZR4 UBE2V2P2-201ENST00000587677 504 ntBASIC4.3□□□□□ -1.72
VSX1Q9NZR4 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC4.3□□□□□ -1.72
VSX1Q9NZR4 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
VSX1Q9NZR4 AC008945.2-201ENST00000606056 604 ntBASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms