Protein–RNA interactions for Protein: Q9BRZ2

TRIM56, E3 ubiquitin-protein ligase TRIM56, humanhuman

Known RBP Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56Q9BRZ2 RN7SKP247-201ENST00000411094 308 ntBASIC5.54□□□□□ -1.52
TRIM56Q9BRZ2 RPL37P10-201ENST00000412884 288 ntBASIC5.54□□□□□ -1.52
TRIM56Q9BRZ2 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC5.54□□□□□ -1.52
TRIM56Q9BRZ2 MTATP6P16-201ENST00000434543 526 ntBASIC5.54□□□□□ -1.52
TRIM56Q9BRZ2 OR6D1P-201ENST00000436165 939 ntBASIC5.54□□□□□ -1.52
TRIM56Q9BRZ2 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC5.54□□□□□ -1.52
TRIM56Q9BRZ2 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC5.54□□□□□ -1.52
TRIM56Q9BRZ2 CBX1P2-201ENST00000453841 458 ntBASIC5.54□□□□□ -1.52
TRIM56Q9BRZ2 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC5.54□□□□□ -1.52
TRIM56Q9BRZ2 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC5.54□□□□□ -1.52
TRIM56Q9BRZ2 ALDH7A1P3-201ENST00000492517 345 ntBASIC5.54□□□□□ -1.52
TRIM56Q9BRZ2 AC024558.1-201ENST00000505008 528 ntBASIC5.54□□□□□ -1.52
TRIM56Q9BRZ2 RNU6-615P-201ENST00000516065 106 ntBASIC5.54□□□□□ -1.52
TRIM56Q9BRZ2 RNU7-51P-201ENST00000516560 62 ntBASIC5.54□□□□□ -1.52
TRIM56Q9BRZ2 RNA5SP503-201ENST00000517047 117 ntBASIC5.54□□□□□ -1.52
TRIM56Q9BRZ2 SNORA43.3-201ENST00000517240 103 ntBASIC5.54□□□□□ -1.52
TRIM56Q9BRZ2 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC5.54□□□□□ -1.52
TRIM56Q9BRZ2 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC5.54□□□□□ -1.52
TRIM56Q9BRZ2 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC5.54□□□□□ -1.52
TRIM56Q9BRZ2 AP001804.3-201ENST00000525146 880 ntBASIC5.54□□□□□ -1.52
TRIM56Q9BRZ2 OR4P1P-201ENST00000530808 1136 ntBASIC5.54□□□□□ -1.52
TRIM56Q9BRZ2 AC027544.3-201ENST00000535082 757 ntBASIC5.54□□□□□ -1.52
TRIM56Q9BRZ2 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC5.54□□□□□ -1.52
TRIM56Q9BRZ2 DCN-210ENST00000547568 823 ntTSL 3 BASIC5.54□□□□□ -1.52
TRIM56Q9BRZ2 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC5.54□□□□□ -1.52
TRIM56Q9BRZ2 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC5.54□□□□□ -1.52
TRIM56Q9BRZ2 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
TRIM56Q9BRZ2 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
TRIM56Q9BRZ2 MIR4775-201ENST00000581168 75 ntBASIC5.54□□□□□ -1.52
TRIM56Q9BRZ2 MIR4512-201ENST00000583257 77 ntBASIC5.54□□□□□ -1.52
TRIM56Q9BRZ2 MIR4660-201ENST00000583549 74 ntBASIC5.54□□□□□ -1.52
TRIM56Q9BRZ2 MIR4443-201ENST00000585052 53 ntBASIC5.54□□□□□ -1.52
TRIM56Q9BRZ2 MIR4424-201ENST00000585257 86 ntBASIC5.54□□□□□ -1.52
TRIM56Q9BRZ2 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC5.54□□□□□ -1.52
TRIM56Q9BRZ2 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC5.54□□□□□ -1.52
TRIM56Q9BRZ2 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC5.54□□□□□ -1.52
TRIM56Q9BRZ2 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.54□□□□□ -1.52
TRIM56Q9BRZ2 7SK.7-201ENST00000603504 247 ntBASIC5.54□□□□□ -1.52
TRIM56Q9BRZ2 AC025588.3-201ENST00000604182 274 ntBASIC5.54□□□□□ -1.52
TRIM56Q9BRZ2 CTHRC1P1-201ENST00000605383 469 ntBASIC5.54□□□□□ -1.52
TRIM56Q9BRZ2 AC103710.2-201ENST00000609912 942 ntBASIC5.54□□□□□ -1.52
TRIM56Q9BRZ2 AL590099.1-201ENST00000615276 138 ntBASIC5.54□□□□□ -1.52
TRIM56Q9BRZ2 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC5.54□□□□□ -1.52
TRIM56Q9BRZ2 WWOX-217ENST00000620008 450 ntTSL 2 BASIC5.54□□□□□ -1.52
TRIM56Q9BRZ2 AC244517.12-201ENST00000623581 663 ntBASIC5.54□□□□□ -1.52
TRIM56Q9BRZ2 TTK-211ENST00000627129 240 ntTSL 5 BASIC5.54□□□□□ -1.52
TRIM56Q9BRZ2 AC135068.12-201ENST00000637370 931 ntBASIC5.54□□□□□ -1.52
TRIM56Q9BRZ2 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
TRIM56Q9BRZ2 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC5.54□□□□□ -1.52
TRIM56Q9BRZ2 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.54□□□□□ -1.52
TRIM56Q9BRZ2 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
TRIM56Q9BRZ2 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC5.54□□□□□ -1.52
TRIM56Q9BRZ2 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC5.54□□□□□ -1.52
TRIM56Q9BRZ2 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5.54□□□□□ -1.52
TRIM56Q9BRZ2 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
TRIM56Q9BRZ2 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
TRIM56Q9BRZ2 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
TRIM56Q9BRZ2 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC5.53□□□□□ -1.52
TRIM56Q9BRZ2 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
TRIM56Q9BRZ2 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.53□□□□□ -1.52
TRIM56Q9BRZ2 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC5.53□□□□□ -1.52
TRIM56Q9BRZ2 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
TRIM56Q9BRZ2 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
TRIM56Q9BRZ2 TAB3P1-202ENST00000452645 1634 ntBASIC5.53□□□□□ -1.52
TRIM56Q9BRZ2 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
TRIM56Q9BRZ2 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
TRIM56Q9BRZ2 AC097063.1-201ENST00000426714 1797 ntBASIC5.53□□□□□ -1.52
TRIM56Q9BRZ2 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
TRIM56Q9BRZ2 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
TRIM56Q9BRZ2 RNA5SP242-201ENST00000364171 118 ntBASIC5.53□□□□□ -1.52
TRIM56Q9BRZ2 SNORD51-201ENST00000384320 80 ntBASIC5.53□□□□□ -1.52
TRIM56Q9BRZ2 RNU6-178P-201ENST00000384631 104 ntBASIC5.53□□□□□ -1.52
TRIM56Q9BRZ2 U3.25-201ENST00000391209 220 ntBASIC5.53□□□□□ -1.52
TRIM56Q9BRZ2 U3.29-201ENST00000391296 212 ntBASIC5.53□□□□□ -1.52
TRIM56Q9BRZ2 RNU4-14P-201ENST00000410858 122 ntBASIC5.53□□□□□ -1.52
TRIM56Q9BRZ2 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC5.53□□□□□ -1.52
TRIM56Q9BRZ2 AC113618.1-201ENST00000416747 285 ntBASIC5.53□□□□□ -1.52
TRIM56Q9BRZ2 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC5.53□□□□□ -1.52
TRIM56Q9BRZ2 AC093155.2-201ENST00000420734 937 ntBASIC5.53□□□□□ -1.52
TRIM56Q9BRZ2 PMCHL1-202ENST00000423102 261 ntBASIC5.53□□□□□ -1.52
TRIM56Q9BRZ2 SNRPEP4-201ENST00000435815 279 ntBASIC5.53□□□□□ -1.52
TRIM56Q9BRZ2 PRPS1P1-201ENST00000445305 876 ntBASIC5.53□□□□□ -1.52
TRIM56Q9BRZ2 ARL2BPP10-201ENST00000446487 531 ntBASIC5.53□□□□□ -1.52
TRIM56Q9BRZ2 AC010733.1-201ENST00000451515 401 ntBASIC5.53□□□□□ -1.52
TRIM56Q9BRZ2 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
TRIM56Q9BRZ2 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC5.53□□□□□ -1.52
TRIM56Q9BRZ2 RNU7-66P-201ENST00000459469 62 ntBASIC5.53□□□□□ -1.52
TRIM56Q9BRZ2 RN7SL188P-201ENST00000469842 285 ntBASIC5.53□□□□□ -1.52
TRIM56Q9BRZ2 RN7SL177P-201ENST00000476596 299 ntBASIC5.53□□□□□ -1.52
TRIM56Q9BRZ2 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC5.53□□□□□ -1.52
TRIM56Q9BRZ2 SSX6-203ENST00000509958 336 ntTSL 3 BASIC5.53□□□□□ -1.52
TRIM56Q9BRZ2 SCARNA20.4-201ENST00000516969 131 ntBASIC5.53□□□□□ -1.52
TRIM56Q9BRZ2 RNA5SP230-201ENST00000517039 122 ntBASIC5.53□□□□□ -1.52
TRIM56Q9BRZ2 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC5.53□□□□□ -1.52
TRIM56Q9BRZ2 AP000889.2-201ENST00000532684 490 ntBASIC5.53□□□□□ -1.52
TRIM56Q9BRZ2 APOOP3-201ENST00000536787 586 ntBASIC5.53□□□□□ -1.52
TRIM56Q9BRZ2 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC5.53□□□□□ -1.52
TRIM56Q9BRZ2 AC004817.2-201ENST00000561794 651 ntBASIC5.53□□□□□ -1.52
TRIM56Q9BRZ2 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC5.53□□□□□ -1.52
TRIM56Q9BRZ2 MRPS21P7-201ENST00000566937 238 ntBASIC5.53□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 95.6 ms