Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 BTG3P1-201ENST00000435859 716 ntBASIC1.56□□□□□ -2.16
VPS13DQ5THJ4 THAP6-203ENST00000502620 582 ntTSL 3 BASIC1.56□□□□□ -2.16
VPS13DQ5THJ4 AC010198.2-201ENST00000550612 259 ntBASIC1.56□□□□□ -2.16
VPS13DQ5THJ4 CYP3A51P-201ENST00000633513 256 ntBASIC1.56□□□□□ -2.16
VPS13DQ5THJ4 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
VPS13DQ5THJ4 USP44-208ENST00000552440 1818 ntTSL 5 BASIC1.56□□□□□ -2.16
VPS13DQ5THJ4 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC1.56□□□□□ -2.16
VPS13DQ5THJ4 AL445213.1-201ENST00000412589 747 ntBASIC1.56□□□□□ -2.16
VPS13DQ5THJ4 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC1.56□□□□□ -2.16
VPS13DQ5THJ4 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC1.56□□□□□ -2.16
VPS13DQ5THJ4 OR7K1P-201ENST00000546439 926 ntBASIC1.56□□□□□ -2.16
VPS13DQ5THJ4 OR11H5P-201ENST00000554039 926 ntBASIC1.56□□□□□ -2.16
VPS13DQ5THJ4 AC012182.1-201ENST00000570133 895 ntBASIC1.56□□□□□ -2.16
VPS13DQ5THJ4 AP001521.1-201ENST00000609150 300 ntBASIC1.56□□□□□ -2.16
VPS13DQ5THJ4 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC1.56□□□□□ -2.16
VPS13DQ5THJ4 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
VPS13DQ5THJ4 ZNF542P-204ENST00000482727 1305 ntBASIC1.56□□□□□ -2.16
VPS13DQ5THJ4 OR4A45P-201ENST00000529954 901 ntBASIC1.56□□□□□ -2.16
VPS13DQ5THJ4 TRAV11-201ENST00000539512 339 ntBASIC1.56□□□□□ -2.16
VPS13DQ5THJ4 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC1.56□□□□□ -2.16
VPS13DQ5THJ4 AC103710.2-201ENST00000609912 942 ntBASIC1.56□□□□□ -2.16
VPS13DQ5THJ4 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC1.56□□□□□ -2.16
VPS13DQ5THJ4 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.56□□□□□ -2.16
VPS13DQ5THJ4 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
VPS13DQ5THJ4 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
VPS13DQ5THJ4 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
VPS13DQ5THJ4 RNU1-73P-201ENST00000383971 164 ntBASIC1.56□□□□□ -2.16
VPS13DQ5THJ4 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC1.56□□□□□ -2.16
VPS13DQ5THJ4 RPL36AP33-201ENST00000450395 310 ntBASIC1.56□□□□□ -2.16
VPS13DQ5THJ4 AC007182.2-201ENST00000489251 402 ntBASIC1.56□□□□□ -2.16
VPS13DQ5THJ4 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
VPS13DQ5THJ4 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC1.56□□□□□ -2.16
VPS13DQ5THJ4 AC021269.2-201ENST00000532318 330 ntBASIC1.56□□□□□ -2.16
VPS13DQ5THJ4 AC011494.1-201ENST00000596454 237 ntBASIC1.56□□□□□ -2.16
VPS13DQ5THJ4 MAPK10-373ENST00000641983 6772 ntBASIC1.56□□□□□ -2.16
VPS13DQ5THJ4 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
VPS13DQ5THJ4 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC1.56□□□□□ -2.16
VPS13DQ5THJ4 Z73965.1-201ENST00000623412 2297 ntBASIC1.55□□□□□ -2.16
VPS13DQ5THJ4 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
VPS13DQ5THJ4 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
VPS13DQ5THJ4 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC1.55□□□□□ -2.16
VPS13DQ5THJ4 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC1.55□□□□□ -2.16
VPS13DQ5THJ4 RNU6-1159P-201ENST00000362933 107 ntBASIC1.55□□□□□ -2.16
VPS13DQ5THJ4 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
VPS13DQ5THJ4 AL118520.1-201ENST00000450770 291 ntBASIC1.55□□□□□ -2.16
VPS13DQ5THJ4 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC1.55□□□□□ -2.16
VPS13DQ5THJ4 Y_RNA.595-201ENST00000410403 105 ntBASIC1.55□□□□□ -2.16
VPS13DQ5THJ4 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC1.55□□□□□ -2.16
VPS13DQ5THJ4 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC1.55□□□□□ -2.16
VPS13DQ5THJ4 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC1.55□□□□□ -2.16
VPS13DQ5THJ4 MIR499A-201ENST00000384903 122 ntBASIC1.55□□□□□ -2.16
VPS13DQ5THJ4 AL121882.1-201ENST00000422893 417 ntBASIC1.55□□□□□ -2.16
VPS13DQ5THJ4 RAD51AP1P1-201ENST00000484195 1001 ntBASIC1.55□□□□□ -2.16
VPS13DQ5THJ4 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC1.55□□□□□ -2.16
VPS13DQ5THJ4 MIR5092-201ENST00000583139 88 ntBASIC1.55□□□□□ -2.16
VPS13DQ5THJ4 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC1.54□□□□□ -2.16
VPS13DQ5THJ4 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC1.54□□□□□ -2.16
VPS13DQ5THJ4 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC1.54□□□□□ -2.16
VPS13DQ5THJ4 RNA5SP344-201ENST00000411081 104 ntBASIC1.54□□□□□ -2.16
VPS13DQ5THJ4 AC091544.1-201ENST00000484702 348 ntBASIC1.54□□□□□ -2.16
VPS13DQ5THJ4 NIPA2P2-201ENST00000496376 1083 ntBASIC1.54□□□□□ -2.16
VPS13DQ5THJ4 AC107222.1-201ENST00000510899 637 ntBASIC1.54□□□□□ -2.16
VPS13DQ5THJ4 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC1.54□□□□□ -2.16
VPS13DQ5THJ4 AC090695.1-201ENST00000561269 1222 ntBASIC1.54□□□□□ -2.16
VPS13DQ5THJ4 AC006116.7-201ENST00000590141 756 ntBASIC1.54□□□□□ -2.16
VPS13DQ5THJ4 AC103798.2-201ENST00000624292 632 ntBASIC1.54□□□□□ -2.16
VPS13DQ5THJ4 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC1.54□□□□□ -2.16
VPS13DQ5THJ4 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC1.54□□□□□ -2.16
VPS13DQ5THJ4 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC1.54□□□□□ -2.16
VPS13DQ5THJ4 AC019155.1-201ENST00000382242 574 ntBASIC1.54□□□□□ -2.16
VPS13DQ5THJ4 AIMP1P1-201ENST00000418670 937 ntBASIC1.54□□□□□ -2.16
VPS13DQ5THJ4 AC092427.1-202ENST00000430569 476 ntBASIC1.54□□□□□ -2.16
VPS13DQ5THJ4 ST13P20-201ENST00000447996 1065 ntBASIC1.54□□□□□ -2.16
VPS13DQ5THJ4 RPL21P18-201ENST00000469899 480 ntBASIC1.54□□□□□ -2.16
VPS13DQ5THJ4 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC1.54□□□□□ -2.16
VPS13DQ5THJ4 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC1.54□□□□□ -2.16
VPS13DQ5THJ4 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC1.54□□□□□ -2.16
VPS13DQ5THJ4 AP006248.2-201ENST00000623309 592 ntBASIC1.54□□□□□ -2.16
VPS13DQ5THJ4 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
VPS13DQ5THJ4 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
VPS13DQ5THJ4 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
VPS13DQ5THJ4 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC1.54□□□□□ -2.16
VPS13DQ5THJ4 SNORA67.3-201ENST00000384366 140 ntBASIC1.54□□□□□ -2.16
VPS13DQ5THJ4 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC1.54□□□□□ -2.16
VPS13DQ5THJ4 AL513175.2-201ENST00000422071 443 ntBASIC1.54□□□□□ -2.16
VPS13DQ5THJ4 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC1.54□□□□□ -2.16
VPS13DQ5THJ4 AC009969.1-201ENST00000438726 172 ntBASIC1.54□□□□□ -2.16
VPS13DQ5THJ4 RPL23AP45-201ENST00000476406 468 ntBASIC1.54□□□□□ -2.16
VPS13DQ5THJ4 RNA5SP200-201ENST00000516360 103 ntBASIC1.54□□□□□ -2.16
VPS13DQ5THJ4 RPL23AP84-201ENST00000571193 464 ntBASIC1.54□□□□□ -2.16
VPS13DQ5THJ4 AC006254.3-201ENST00000603353 884 ntBASIC1.54□□□□□ -2.16
VPS13DQ5THJ4 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
VPS13DQ5THJ4 AL445437.1-201ENST00000623157 3087 ntBASIC1.54□□□□□ -2.16
VPS13DQ5THJ4 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
VPS13DQ5THJ4 Y_RNA.796-201ENST00000364268 102 ntBASIC1.54□□□□□ -2.16
VPS13DQ5THJ4 Y_RNA.799-201ENST00000364992 102 ntBASIC1.54□□□□□ -2.16
VPS13DQ5THJ4 Y_RNA.355-201ENST00000365462 98 ntBASIC1.54□□□□□ -2.16
VPS13DQ5THJ4 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC1.54□□□□□ -2.16
VPS13DQ5THJ4 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC1.54□□□□□ -2.16
VPS13DQ5THJ4 AC090897.3-201ENST00000636973 1157 ntBASIC1.54□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms