Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 CPD-202ENST00000543464 4007 ntTSL 2 BASIC2.18□□□□□ -2.06
HIST1H1AQ02539 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
HIST1H1AQ02539 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.18□□□□□ -2.06
HIST1H1AQ02539 SNORA25.6-201ENST00000364121 118 ntBASIC2.18□□□□□ -2.06
HIST1H1AQ02539 DEFA7P-201ENST00000382676 285 ntBASIC2.18□□□□□ -2.06
HIST1H1AQ02539 MIR512-1-201ENST00000384913 84 ntBASIC2.18□□□□□ -2.06
HIST1H1AQ02539 MIR34B-201ENST00000385076 84 ntBASIC2.18□□□□□ -2.06
HIST1H1AQ02539 RNU6-837P-201ENST00000391056 108 ntBASIC2.18□□□□□ -2.06
HIST1H1AQ02539 SNORA48.7-201ENST00000391302 135 ntBASIC2.18□□□□□ -2.06
HIST1H1AQ02539 AL353692.2-201ENST00000407054 335 ntBASIC2.18□□□□□ -2.06
HIST1H1AQ02539 AC092447.6-201ENST00000414578 210 ntBASIC2.18□□□□□ -2.06
HIST1H1AQ02539 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
HIST1H1AQ02539 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC2.18□□□□□ -2.06
HIST1H1AQ02539 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC2.18□□□□□ -2.06
HIST1H1AQ02539 SUMO1P4-201ENST00000429430 302 ntBASIC2.18□□□□□ -2.06
HIST1H1AQ02539 UBE2V1P1-201ENST00000430836 445 ntBASIC2.18□□□□□ -2.06
HIST1H1AQ02539 AC129850.1-201ENST00000436203 508 ntBASIC2.18□□□□□ -2.06
HIST1H1AQ02539 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC2.18□□□□□ -2.06
HIST1H1AQ02539 RPS29P6-201ENST00000438196 145 ntBASIC2.18□□□□□ -2.06
HIST1H1AQ02539 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC2.18□□□□□ -2.06
HIST1H1AQ02539 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC2.18□□□□□ -2.06
HIST1H1AQ02539 AC044797.1-201ENST00000445744 679 ntBASIC2.18□□□□□ -2.06
HIST1H1AQ02539 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC2.18□□□□□ -2.06
HIST1H1AQ02539 DCLRE1CP1-201ENST00000454630 470 ntBASIC2.18□□□□□ -2.06
HIST1H1AQ02539 snoU13.3-201ENST00000459441 104 ntBASIC2.18□□□□□ -2.06
HIST1H1AQ02539 AC073901.1-201ENST00000462471 408 ntBASIC2.18□□□□□ -2.06
HIST1H1AQ02539 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC2.18□□□□□ -2.06
HIST1H1AQ02539 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC2.18□□□□□ -2.06
HIST1H1AQ02539 AC008885.1-201ENST00000514930 301 ntBASIC2.18□□□□□ -2.06
HIST1H1AQ02539 SCGB1D5P-201ENST00000515134 247 ntBASIC2.18□□□□□ -2.06
HIST1H1AQ02539 SNORA9.3-201ENST00000516383 129 ntBASIC2.18□□□□□ -2.06
HIST1H1AQ02539 HMGB1P41-201ENST00000520234 440 ntBASIC2.18□□□□□ -2.06
HIST1H1AQ02539 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC2.18□□□□□ -2.06
HIST1H1AQ02539 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.18□□□□□ -2.06
HIST1H1AQ02539 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
HIST1H1AQ02539 AP003385.6-201ENST00000531603 374 ntBASIC2.18□□□□□ -2.06
HIST1H1AQ02539 AP002812.4-201ENST00000532139 286 ntBASIC2.18□□□□□ -2.06
HIST1H1AQ02539 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC2.18□□□□□ -2.06
HIST1H1AQ02539 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
HIST1H1AQ02539 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC2.18□□□□□ -2.06
HIST1H1AQ02539 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.18□□□□□ -2.06
HIST1H1AQ02539 SRGNP1-201ENST00000603392 451 ntBASIC2.18□□□□□ -2.06
HIST1H1AQ02539 AC005021.1-201ENST00000608730 355 ntBASIC2.18□□□□□ -2.06
HIST1H1AQ02539 MIR6076-201ENST00000617521 113 ntBASIC2.18□□□□□ -2.06
HIST1H1AQ02539 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC2.18□□□□□ -2.06
HIST1H1AQ02539 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC2.18□□□□□ -2.06
HIST1H1AQ02539 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC2.18□□□□□ -2.06
HIST1H1AQ02539 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.18□□□□□ -2.06
HIST1H1AQ02539 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
HIST1H1AQ02539 AC000403.1-201ENST00000613696 3585 ntBASIC2.18□□□□□ -2.06
HIST1H1AQ02539 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC2.18□□□□□ -2.06
HIST1H1AQ02539 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC2.18□□□□□ -2.06
HIST1H1AQ02539 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
HIST1H1AQ02539 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.17□□□□□ -2.06
HIST1H1AQ02539 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
HIST1H1AQ02539 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.17□□□□□ -2.06
HIST1H1AQ02539 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.17□□□□□ -2.06
HIST1H1AQ02539 SNORD21-201ENST00000383953 95 ntBASIC2.17□□□□□ -2.06
HIST1H1AQ02539 SNORA54-201ENST00000384281 123 ntBASIC2.17□□□□□ -2.06
HIST1H1AQ02539 RPS3AP25-201ENST00000411660 793 ntBASIC2.17□□□□□ -2.06
HIST1H1AQ02539 AC105402.1-201ENST00000413336 545 ntBASIC2.17□□□□□ -2.06
HIST1H1AQ02539 AC127537.2-201ENST00000439258 465 ntBASIC2.17□□□□□ -2.06
HIST1H1AQ02539 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC2.17□□□□□ -2.06
HIST1H1AQ02539 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.17□□□□□ -2.06
HIST1H1AQ02539 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.17□□□□□ -2.06
HIST1H1AQ02539 RPL34P26-201ENST00000445636 354 ntBASIC2.17□□□□□ -2.06
HIST1H1AQ02539 AC112492.1-201ENST00000449607 712 ntBASIC2.17□□□□□ -2.06
HIST1H1AQ02539 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC2.17□□□□□ -2.06
HIST1H1AQ02539 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.17□□□□□ -2.06
HIST1H1AQ02539 AL109741.2-201ENST00000455561 343 ntBASIC2.17□□□□□ -2.06
HIST1H1AQ02539 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC2.17□□□□□ -2.06
HIST1H1AQ02539 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC2.17□□□□□ -2.06
HIST1H1AQ02539 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC2.17□□□□□ -2.06
HIST1H1AQ02539 RPL37P25-201ENST00000507308 276 ntBASIC2.17□□□□□ -2.06
HIST1H1AQ02539 AC021146.7-201ENST00000509604 775 ntBASIC2.17□□□□□ -2.06
HIST1H1AQ02539 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC2.17□□□□□ -2.06
HIST1H1AQ02539 AC016065.2-201ENST00000514530 444 ntBASIC2.17□□□□□ -2.06
HIST1H1AQ02539 RNU4-18P-201ENST00000516751 149 ntBASIC2.17□□□□□ -2.06
HIST1H1AQ02539 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC2.17□□□□□ -2.06
HIST1H1AQ02539 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC2.17□□□□□ -2.06
HIST1H1AQ02539 AP002404.1-201ENST00000532005 451 ntBASIC2.17□□□□□ -2.06
HIST1H1AQ02539 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC2.17□□□□□ -2.06
HIST1H1AQ02539 MIR5194-201ENST00000582634 120 ntBASIC2.17□□□□□ -2.06
HIST1H1AQ02539 AC103881.1-201ENST00000603476 538 ntBASIC2.17□□□□□ -2.06
HIST1H1AQ02539 AL137843.1-201ENST00000605078 385 ntBASIC2.17□□□□□ -2.06
HIST1H1AQ02539 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC2.17□□□□□ -2.06
HIST1H1AQ02539 AL161734.1-201ENST00000609720 557 ntBASIC2.17□□□□□ -2.06
HIST1H1AQ02539 AL138880.2-201ENST00000616214 239 ntBASIC2.17□□□□□ -2.06
HIST1H1AQ02539 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.17□□□□□ -2.06
HIST1H1AQ02539 ZNF271P-202ENST00000465539 1970 ntBASIC2.17□□□□□ -2.06
HIST1H1AQ02539 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
HIST1H1AQ02539 AC135776.4-201ENST00000624300 1904 ntBASIC2.17□□□□□ -2.06
HIST1H1AQ02539 ZNF734P-201ENST00000419494 1534 ntBASIC2.17□□□□□ -2.06
HIST1H1AQ02539 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
HIST1H1AQ02539 NSRP1P1-201ENST00000444067 1693 ntBASIC2.16□□□□□ -2.06
HIST1H1AQ02539 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
HIST1H1AQ02539 MIR181A2-201ENST00000384863 110 ntBASIC2.16□□□□□ -2.06
HIST1H1AQ02539 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
HIST1H1AQ02539 RN7SKP27-201ENST00000410684 333 ntBASIC2.16□□□□□ -2.06
HIST1H1AQ02539 RPL26P37-201ENST00000411983 438 ntBASIC2.16□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms