Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC2.68□□□□□ -1.98
HLA-DQB2P05538 AL355578.1-201ENST00000607405 1328 ntBASIC2.68□□□□□ -1.98
HLA-DQB2P05538 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
HLA-DQB2P05538 AC117529.2-201ENST00000512159 2068 ntBASIC2.67□□□□□ -1.98
HLA-DQB2P05538 MTND5P7-201ENST00000413558 1798 ntBASIC2.67□□□□□ -1.98
HLA-DQB2P05538 API5P2-201ENST00000397055 1498 ntBASIC2.67□□□□□ -1.98
HLA-DQB2P05538 RNU6-600P-201ENST00000362524 99 ntBASIC2.67□□□□□ -1.98
HLA-DQB2P05538 RNU6-7-201ENST00000364784 107 ntBASIC2.67□□□□□ -1.98
HLA-DQB2P05538 RNU6-8-201ENST00000365467 107 ntBASIC2.67□□□□□ -1.98
HLA-DQB2P05538 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
HLA-DQB2P05538 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
HLA-DQB2P05538 RNA5SP210-201ENST00000391034 120 ntBASIC2.67□□□□□ -1.98
HLA-DQB2P05538 MIR887-201ENST00000401258 79 ntBASIC2.67□□□□□ -1.98
HLA-DQB2P05538 BTBD10P2-201ENST00000404779 676 ntBASIC2.67□□□□□ -1.98
HLA-DQB2P05538 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC2.67□□□□□ -1.98
HLA-DQB2P05538 TOMM22P1-201ENST00000418578 312 ntBASIC2.67□□□□□ -1.98
HLA-DQB2P05538 AC091390.3-201ENST00000426478 338 ntBASIC2.67□□□□□ -1.98
HLA-DQB2P05538 AC073508.1-201ENST00000428866 656 ntBASIC2.67□□□□□ -1.98
HLA-DQB2P05538 PSMA2P3-201ENST00000429685 675 ntBASIC2.67□□□□□ -1.98
HLA-DQB2P05538 RPL21P112-201ENST00000434403 463 ntBASIC2.67□□□□□ -1.98
HLA-DQB2P05538 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
HLA-DQB2P05538 HMGN2P20-201ENST00000437531 273 ntBASIC2.67□□□□□ -1.98
HLA-DQB2P05538 AC093392.2-201ENST00000450682 337 ntBASIC2.67□□□□□ -1.98
HLA-DQB2P05538 AC093663.2-201ENST00000484625 313 ntBASIC2.67□□□□□ -1.98
HLA-DQB2P05538 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC2.67□□□□□ -1.98
HLA-DQB2P05538 AC104687.1-201ENST00000485829 412 ntBASIC2.67□□□□□ -1.98
HLA-DQB2P05538 AC006483.1-201ENST00000487308 313 ntBASIC2.67□□□□□ -1.98
HLA-DQB2P05538 HMGB1P38-201ENST00000490557 577 ntBASIC2.67□□□□□ -1.98
HLA-DQB2P05538 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.67□□□□□ -1.98
HLA-DQB2P05538 VN1R104P-201ENST00000505115 1009 ntBASIC2.67□□□□□ -1.98
HLA-DQB2P05538 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.67□□□□□ -1.98
HLA-DQB2P05538 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC2.67□□□□□ -1.98
HLA-DQB2P05538 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC2.67□□□□□ -1.98
HLA-DQB2P05538 HMGB1P47-201ENST00000511281 589 ntBASIC2.67□□□□□ -1.98
HLA-DQB2P05538 AC016065.2-201ENST00000514530 444 ntBASIC2.67□□□□□ -1.98
HLA-DQB2P05538 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC2.67□□□□□ -1.98
HLA-DQB2P05538 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC2.67□□□□□ -1.98
HLA-DQB2P05538 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC2.67□□□□□ -1.98
HLA-DQB2P05538 AC004923.2-201ENST00000529649 369 ntBASIC2.67□□□□□ -1.98
HLA-DQB2P05538 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC2.67□□□□□ -1.98
HLA-DQB2P05538 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC2.67□□□□□ -1.98
HLA-DQB2P05538 AC090751.1-201ENST00000566966 267 ntBASIC2.67□□□□□ -1.98
HLA-DQB2P05538 MIR4474-201ENST00000579189 78 ntBASIC2.67□□□□□ -1.98
HLA-DQB2P05538 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC2.67□□□□□ -1.98
HLA-DQB2P05538 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC2.67□□□□□ -1.98
HLA-DQB2P05538 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
HLA-DQB2P05538 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC2.67□□□□□ -1.98
HLA-DQB2P05538 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC2.67□□□□□ -1.98
HLA-DQB2P05538 AC002076.2-201ENST00000617362 122 ntBASIC2.67□□□□□ -1.98
HLA-DQB2P05538 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC2.67□□□□□ -1.98
HLA-DQB2P05538 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.67□□□□□ -1.98
HLA-DQB2P05538 MTCO1P8-201ENST00000416914 1523 ntBASIC2.67□□□□□ -1.98
HLA-DQB2P05538 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
HLA-DQB2P05538 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.66□□□□□ -1.98
HLA-DQB2P05538 FAM35CP-201ENST00000554755 2470 ntBASIC2.66□□□□□ -1.98
HLA-DQB2P05538 MTND4P34-201ENST00000572715 1371 ntBASIC2.66□□□□□ -1.98
HLA-DQB2P05538 AC009501.3-201ENST00000605001 1352 ntBASIC2.66□□□□□ -1.98
HLA-DQB2P05538 RNU6-859P-201ENST00000362728 107 ntBASIC2.66□□□□□ -1.98
HLA-DQB2P05538 RNU6-335P-201ENST00000364563 113 ntBASIC2.66□□□□□ -1.98
HLA-DQB2P05538 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.66□□□□□ -1.98
HLA-DQB2P05538 NDUFB4P4-201ENST00000404822 243 ntBASIC2.66□□□□□ -1.98
HLA-DQB2P05538 AL354719.1-201ENST00000406535 843 ntBASIC2.66□□□□□ -1.98
HLA-DQB2P05538 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.66□□□□□ -1.98
HLA-DQB2P05538 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
HLA-DQB2P05538 AL139281.1-201ENST00000422120 335 ntBASIC2.66□□□□□ -1.98
HLA-DQB2P05538 AL513175.1-201ENST00000431492 780 ntBASIC2.66□□□□□ -1.98
HLA-DQB2P05538 RPL7P29-201ENST00000437151 728 ntBASIC2.66□□□□□ -1.98
HLA-DQB2P05538 HSPE1P28-201ENST00000443139 211 ntBASIC2.66□□□□□ -1.98
HLA-DQB2P05538 RAD1P2-201ENST00000446414 663 ntBASIC2.66□□□□□ -1.98
HLA-DQB2P05538 AP000936.2-201ENST00000447151 681 ntBASIC2.66□□□□□ -1.98
HLA-DQB2P05538 AL513343.1-201ENST00000451818 792 ntBASIC2.66□□□□□ -1.98
HLA-DQB2P05538 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC2.66□□□□□ -1.98
HLA-DQB2P05538 RPS26P21-201ENST00000475397 348 ntBASIC2.66□□□□□ -1.98
HLA-DQB2P05538 GMPSP1-201ENST00000514075 579 ntBASIC2.66□□□□□ -1.98
HLA-DQB2P05538 RNA5SP356-201ENST00000515972 94 ntBASIC2.66□□□□□ -1.98
HLA-DQB2P05538 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC2.66□□□□□ -1.98
HLA-DQB2P05538 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC2.66□□□□□ -1.98
HLA-DQB2P05538 MTCYBP41-201ENST00000528913 1123 ntBASIC2.66□□□□□ -1.98
HLA-DQB2P05538 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC2.66□□□□□ -1.98
HLA-DQB2P05538 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC2.66□□□□□ -1.98
HLA-DQB2P05538 EIF1AXP2-201ENST00000555940 413 ntBASIC2.66□□□□□ -1.98
HLA-DQB2P05538 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC2.66□□□□□ -1.98
HLA-DQB2P05538 AC106782.4-201ENST00000568264 210 ntBASIC2.66□□□□□ -1.98
HLA-DQB2P05538 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC2.66□□□□□ -1.98
HLA-DQB2P05538 MIR4319-201ENST00000577285 85 ntBASIC2.66□□□□□ -1.98
HLA-DQB2P05538 AC011471.1-201ENST00000585766 187 ntBASIC2.66□□□□□ -1.98
HLA-DQB2P05538 AL160281.1-201ENST00000605307 311 ntBASIC2.66□□□□□ -1.98
HLA-DQB2P05538 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC2.66□□□□□ -1.98
HLA-DQB2P05538 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC2.66□□□□□ -1.98
HLA-DQB2P05538 AC024023.1-201ENST00000624530 922 ntBASIC2.66□□□□□ -1.98
HLA-DQB2P05538 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.66□□□□□ -1.98
HLA-DQB2P05538 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
HLA-DQB2P05538 AC116096.1-201ENST00000566804 2314 ntBASIC2.65□□□□□ -1.98
HLA-DQB2P05538 AC110774.1-201ENST00000623567 2018 ntBASIC2.65□□□□□ -1.99
HLA-DQB2P05538 SNORA51.2-201ENST00000364595 132 ntBASIC2.65□□□□□ -1.99
HLA-DQB2P05538 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
HLA-DQB2P05538 SAR1AP2-201ENST00000392696 594 ntBASIC2.65□□□□□ -1.99
HLA-DQB2P05538 AGR3-202ENST00000402239 563 ntTSL 2 BASIC2.65□□□□□ -1.99
HLA-DQB2P05538 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.65□□□□□ -1.99
HLA-DQB2P05538 AC023128.2-201ENST00000420880 1223 ntBASIC2.65□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms