Protein–RNA interactions for Protein: O43295

SRGAP3, SLIT-ROBO Rho GTPase-activating protein 3, humanhuman

Predictions only

Length 1,099 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3O43295 MTND1P3-201ENST00000484956 952 ntBASIC5.41□□□□□ -1.54
SRGAP3O43295 RPL35P6-201ENST00000490024 372 ntBASIC5.41□□□□□ -1.54
SRGAP3O43295 AC026979.1-201ENST00000492525 396 ntBASIC5.41□□□□□ -1.54
SRGAP3O43295 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC5.41□□□□□ -1.54
SRGAP3O43295 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC5.41□□□□□ -1.54
SRGAP3O43295 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC5.41□□□□□ -1.54
SRGAP3O43295 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC5.41□□□□□ -1.54
SRGAP3O43295 AC008126.1-201ENST00000549019 480 ntBASIC5.41□□□□□ -1.54
SRGAP3O43295 ARL2BPP2-201ENST00000550907 489 ntBASIC5.41□□□□□ -1.54
SRGAP3O43295 RPL21P7-201ENST00000557463 483 ntBASIC5.41□□□□□ -1.54
SRGAP3O43295 AL845331.3-202ENST00000562856 261 ntBASIC5.41□□□□□ -1.54
SRGAP3O43295 RPS3AP23-202ENST00000574601 686 ntBASIC5.41□□□□□ -1.54
SRGAP3O43295 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC5.41□□□□□ -1.54
SRGAP3O43295 AC012507.3-201ENST00000603556 477 ntBASIC5.41□□□□□ -1.54
SRGAP3O43295 AC114781.5-201ENST00000615297 108 ntBASIC5.41□□□□□ -1.54
SRGAP3O43295 AC007546.1-201ENST00000619452 559 ntBASIC5.41□□□□□ -1.54
SRGAP3O43295 PACRG-211ENST00000621363 360 ntTSL 5 BASIC5.41□□□□□ -1.54
SRGAP3O43295 AC009268.2-201ENST00000621925 457 ntBASIC5.41□□□□□ -1.54
SRGAP3O43295 AC090574.1-201ENST00000623186 233 ntBASIC5.41□□□□□ -1.54
SRGAP3O43295 AC091905.1-201ENST00000624400 311 ntBASIC5.41□□□□□ -1.54
SRGAP3O43295 AP000843.1-201ENST00000624880 701 ntBASIC5.41□□□□□ -1.54
SRGAP3O43295 DDX18P4-201ENST00000511690 1966 ntBASIC5.41□□□□□ -1.54
SRGAP3O43295 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC5.41□□□□□ -1.54
SRGAP3O43295 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
SRGAP3O43295 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
SRGAP3O43295 MAPK10-320ENST00000641462 6696 ntBASIC5.41□□□□□ -1.54
SRGAP3O43295 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
SRGAP3O43295 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
SRGAP3O43295 OFD1P5Y-201ENST00000447585 2590 ntBASIC5.41□□□□□ -1.54
SRGAP3O43295 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
SRGAP3O43295 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
SRGAP3O43295 AL158163.1-201ENST00000603915 1649 ntBASIC5.41□□□□□ -1.54
SRGAP3O43295 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC5.4□□□□□ -1.54
SRGAP3O43295 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
SRGAP3O43295 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC5.4□□□□□ -1.54
SRGAP3O43295 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC5.4□□□□□ -1.54
SRGAP3O43295 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
SRGAP3O43295 RPL32P3-201ENST00000359025 275 ntBASIC5.4□□□□□ -1.54
SRGAP3O43295 Y_RNA.86-201ENST00000363020 111 ntBASIC5.4□□□□□ -1.54
SRGAP3O43295 RNU1-132P-201ENST00000364300 164 ntBASIC5.4□□□□□ -1.54
SRGAP3O43295 ADIG-201ENST00000373348 430 ntTSL 2 BASIC5.4□□□□□ -1.54
SRGAP3O43295 RNU6-657P-201ENST00000383904 107 ntBASIC5.4□□□□□ -1.54
SRGAP3O43295 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC5.4□□□□□ -1.54
SRGAP3O43295 SNRPEP2-201ENST00000397592 279 ntBASIC5.4□□□□□ -1.54
SRGAP3O43295 MIR1911-201ENST00000410783 80 ntBASIC5.4□□□□□ -1.54
SRGAP3O43295 AC007390.1-201ENST00000415722 356 ntBASIC5.4□□□□□ -1.54
SRGAP3O43295 HMGB3P20-201ENST00000417997 600 ntBASIC5.4□□□□□ -1.54
SRGAP3O43295 PIGFP2-201ENST00000421400 651 ntBASIC5.4□□□□□ -1.54
SRGAP3O43295 RPL23AP16-201ENST00000441715 421 ntBASIC5.4□□□□□ -1.54
SRGAP3O43295 SNRPGP6-201ENST00000451124 220 ntBASIC5.4□□□□□ -1.54
SRGAP3O43295 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC5.4□□□□□ -1.54
SRGAP3O43295 BTF3P5-201ENST00000457252 467 ntBASIC5.4□□□□□ -1.54
SRGAP3O43295 MTCO1P42-201ENST00000457379 726 ntBASIC5.4□□□□□ -1.54
SRGAP3O43295 RPL7P22-201ENST00000466005 733 ntBASIC5.4□□□□□ -1.54
SRGAP3O43295 RPL23AP71-201ENST00000470966 469 ntBASIC5.4□□□□□ -1.54
SRGAP3O43295 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC5.4□□□□□ -1.54
SRGAP3O43295 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC5.4□□□□□ -1.54
SRGAP3O43295 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC5.4□□□□□ -1.54
SRGAP3O43295 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC5.4□□□□□ -1.54
SRGAP3O43295 IGHVIII-2-1-201ENST00000518843 291 ntBASIC5.4□□□□□ -1.54
SRGAP3O43295 AL352979.3-201ENST00000553515 247 ntBASIC5.4□□□□□ -1.54
SRGAP3O43295 AL442663.2-201ENST00000554385 511 ntBASIC5.4□□□□□ -1.54
SRGAP3O43295 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC5.4□□□□□ -1.54
SRGAP3O43295 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC5.4□□□□□ -1.54
SRGAP3O43295 AL157394.1-201ENST00000562983 1224 ntBASIC5.4□□□□□ -1.54
SRGAP3O43295 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC5.4□□□□□ -1.54
SRGAP3O43295 AP001180.3-201ENST00000582221 145 ntBASIC5.4□□□□□ -1.54
SRGAP3O43295 NRBF2P1-201ENST00000587407 859 ntBASIC5.4□□□□□ -1.54
SRGAP3O43295 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC5.4□□□□□ -1.54
SRGAP3O43295 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC5.4□□□□□ -1.54
SRGAP3O43295 AC005498.1-201ENST00000592125 465 ntBASIC5.4□□□□□ -1.54
SRGAP3O43295 AC055876.5-201ENST00000605667 259 ntBASIC5.4□□□□□ -1.54
SRGAP3O43295 AP001521.1-201ENST00000609150 300 ntBASIC5.4□□□□□ -1.54
SRGAP3O43295 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC5.4□□□□□ -1.54
SRGAP3O43295 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC5.4□□□□□ -1.54
SRGAP3O43295 AL442067.2-201ENST00000614033 363 ntBASIC5.4□□□□□ -1.54
SRGAP3O43295 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.55
SRGAP3O43295 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
SRGAP3O43295 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.55
SRGAP3O43295 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.55
SRGAP3O43295 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC5.4□□□□□ -1.55
SRGAP3O43295 SCN1A-220ENST00000641603 12506 ntBASIC5.4□□□□□ -1.55
SRGAP3O43295 GHR-202ENST00000357703 4316 ntTSL 5 BASIC5.39□□□□□ -1.55
SRGAP3O43295 GHR-213ENST00000622294 4312 ntTSL 5 BASIC5.39□□□□□ -1.55
SRGAP3O43295 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC5.39□□□□□ -1.55
SRGAP3O43295 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC5.39□□□□□ -1.55
SRGAP3O43295 AC006971.1-201ENST00000407916 4486 ntBASIC5.39□□□□□ -1.55
SRGAP3O43295 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC5.39□□□□□ -1.55
SRGAP3O43295 OR11H4-201ENST00000315409 1082 ntBASIC5.39□□□□□ -1.55
SRGAP3O43295 RNA5SP175-201ENST00000364275 119 ntBASIC5.39□□□□□ -1.55
SRGAP3O43295 RNA5SP22-201ENST00000365393 109 ntBASIC5.39□□□□□ -1.55
SRGAP3O43295 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC5.39□□□□□ -1.55
SRGAP3O43295 RNU6-1103P-201ENST00000384150 107 ntBASIC5.39□□□□□ -1.55
SRGAP3O43295 Y_RNA.460-201ENST00000384255 102 ntBASIC5.39□□□□□ -1.55
SRGAP3O43295 RNU2-28P-201ENST00000410457 189 ntBASIC5.39□□□□□ -1.55
SRGAP3O43295 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC5.39□□□□□ -1.55
SRGAP3O43295 C4BPAP2-201ENST00000428434 478 ntBASIC5.39□□□□□ -1.55
SRGAP3O43295 RPL31P35-201ENST00000431058 377 ntBASIC5.39□□□□□ -1.55
SRGAP3O43295 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC5.39□□□□□ -1.55
SRGAP3O43295 HMGB3P10-201ENST00000434734 572 ntBASIC5.39□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms