Protein–RNA interactions for Protein: A0A0B4J275

TRAV17, T-cell receptor alpha variable 17 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV17A0A0B4J275 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.32□□□□□ -2.04
TRAV17A0A0B4J275 DNAJC19P3-201ENST00000594491 331 ntBASIC2.32□□□□□ -2.04
TRAV17A0A0B4J275 AC079089.3-201ENST00000603094 673 ntBASIC2.32□□□□□ -2.04
TRAV17A0A0B4J275 AC018754.1-201ENST00000607486 925 ntBASIC2.32□□□□□ -2.04
TRAV17A0A0B4J275 CR381653.2-201ENST00000624041 768 ntBASIC2.32□□□□□ -2.04
TRAV17A0A0B4J275 AC084035.1-201ENST00000634543 607 ntBASIC2.32□□□□□ -2.04
TRAV17A0A0B4J275 LRRC77P-213ENST00000637727 880 ntBASIC2.32□□□□□ -2.04
TRAV17A0A0B4J275 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
TRAV17A0A0B4J275 CCNE2-202ENST00000396133 1361 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
TRAV17A0A0B4J275 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
TRAV17A0A0B4J275 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC2.32□□□□□ -2.04
TRAV17A0A0B4J275 EFTUD1P2-201ENST00000514817 1603 ntBASIC2.31□□□□□ -2.04
TRAV17A0A0B4J275 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
TRAV17A0A0B4J275 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
TRAV17A0A0B4J275 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.31□□□□□ -2.04
TRAV17A0A0B4J275 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
TRAV17A0A0B4J275 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
TRAV17A0A0B4J275 AL139095.1-201ENST00000404326 391 ntBASIC2.31□□□□□ -2.04
TRAV17A0A0B4J275 RN7SKP192-201ENST00000411291 327 ntBASIC2.31□□□□□ -2.04
TRAV17A0A0B4J275 AL135786.1-201ENST00000415892 214 ntBASIC2.31□□□□□ -2.04
TRAV17A0A0B4J275 RBM6-203ENST00000421682 684 ntTSL 2 BASIC2.31□□□□□ -2.04
TRAV17A0A0B4J275 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
TRAV17A0A0B4J275 AL662791.1-201ENST00000441992 928 ntBASIC2.31□□□□□ -2.04
TRAV17A0A0B4J275 AC104389.3-201ENST00000445629 235 ntBASIC2.31□□□□□ -2.04
TRAV17A0A0B4J275 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC2.31□□□□□ -2.04
TRAV17A0A0B4J275 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC2.31□□□□□ -2.04
TRAV17A0A0B4J275 MTATP6P22-201ENST00000507369 598 ntBASIC2.31□□□□□ -2.04
TRAV17A0A0B4J275 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC2.31□□□□□ -2.04
TRAV17A0A0B4J275 RN7SKP82-201ENST00000516786 223 ntBASIC2.31□□□□□ -2.04
TRAV17A0A0B4J275 AC109329.2-201ENST00000519658 482 ntBASIC2.31□□□□□ -2.04
TRAV17A0A0B4J275 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC2.31□□□□□ -2.04
TRAV17A0A0B4J275 AL133271.1-201ENST00000538229 291 ntBASIC2.31□□□□□ -2.04
TRAV17A0A0B4J275 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC2.31□□□□□ -2.04
TRAV17A0A0B4J275 LLPHP1-201ENST00000603571 367 ntBASIC2.31□□□□□ -2.04
TRAV17A0A0B4J275 AC007938.3-201ENST00000604965 623 ntBASIC2.31□□□□□ -2.04
TRAV17A0A0B4J275 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
TRAV17A0A0B4J275 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.31□□□□□ -2.04
TRAV17A0A0B4J275 AC131902.3-201ENST00000611767 581 ntBASIC2.31□□□□□ -2.04
TRAV17A0A0B4J275 MIR6715A-201ENST00000615929 79 ntBASIC2.31□□□□□ -2.04
TRAV17A0A0B4J275 AC139769.3-201ENST00000618383 175 ntBASIC2.31□□□□□ -2.04
TRAV17A0A0B4J275 AC009501.3-201ENST00000605001 1352 ntBASIC2.31□□□□□ -2.04
TRAV17A0A0B4J275 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
TRAV17A0A0B4J275 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
TRAV17A0A0B4J275 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
TRAV17A0A0B4J275 Z82195.2-201ENST00000612348 18351 ntBASIC2.31□□□□□ -2.04
TRAV17A0A0B4J275 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC2.31□□□□□ -2.04
TRAV17A0A0B4J275 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.3□□□□□ -2.04
TRAV17A0A0B4J275 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.3□□□□□ -2.04
TRAV17A0A0B4J275 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.3□□□□□ -2.04
TRAV17A0A0B4J275 U8.2-201ENST00000363156 134 ntBASIC2.3□□□□□ -2.04
TRAV17A0A0B4J275 RNU6-697P-201ENST00000363348 107 ntBASIC2.3□□□□□ -2.04
TRAV17A0A0B4J275 MIR592-201ENST00000384959 97 ntBASIC2.3□□□□□ -2.04
TRAV17A0A0B4J275 RPS4XP7-201ENST00000406274 780 ntBASIC2.3□□□□□ -2.04
TRAV17A0A0B4J275 LSM5-205ENST00000409952 687 ntTSL 4 BASIC2.3□□□□□ -2.04
TRAV17A0A0B4J275 LSM5-206ENST00000409987 504 ntTSL 5 BASIC2.3□□□□□ -2.04
TRAV17A0A0B4J275 RNU4-53P-201ENST00000410828 140 ntBASIC2.3□□□□□ -2.04
TRAV17A0A0B4J275 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC2.3□□□□□ -2.04
TRAV17A0A0B4J275 AC004022.2-201ENST00000413824 193 ntBASIC2.3□□□□□ -2.04
TRAV17A0A0B4J275 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC2.3□□□□□ -2.04
TRAV17A0A0B4J275 MTND4P11-201ENST00000417020 1058 ntBASIC2.3□□□□□ -2.04
TRAV17A0A0B4J275 AC009963.1-201ENST00000417265 157 ntBASIC2.3□□□□□ -2.04
TRAV17A0A0B4J275 AL121890.1-201ENST00000435457 205 ntBASIC2.3□□□□□ -2.04
TRAV17A0A0B4J275 UBE2D3P1-201ENST00000436669 444 ntBASIC2.3□□□□□ -2.04
TRAV17A0A0B4J275 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC2.3□□□□□ -2.04
TRAV17A0A0B4J275 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC2.3□□□□□ -2.04
TRAV17A0A0B4J275 AC233982.1-201ENST00000451247 436 ntBASIC2.3□□□□□ -2.04
TRAV17A0A0B4J275 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC2.3□□□□□ -2.04
TRAV17A0A0B4J275 RPL23AP45-201ENST00000476406 468 ntBASIC2.3□□□□□ -2.04
TRAV17A0A0B4J275 AC093663.2-201ENST00000484625 313 ntBASIC2.3□□□□□ -2.04
TRAV17A0A0B4J275 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.3□□□□□ -2.04
TRAV17A0A0B4J275 AC118282.1-201ENST00000506408 765 ntBASIC2.3□□□□□ -2.04
TRAV17A0A0B4J275 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC2.3□□□□□ -2.04
TRAV17A0A0B4J275 MEPE-206ENST00000511670 550 ntTSL 4 BASIC2.3□□□□□ -2.04
TRAV17A0A0B4J275 AC119751.1-201ENST00000513357 765 ntBASIC2.3□□□□□ -2.04
TRAV17A0A0B4J275 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.3□□□□□ -2.04
TRAV17A0A0B4J275 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
TRAV17A0A0B4J275 AP000857.1-201ENST00000532151 543 ntBASIC2.3□□□□□ -2.04
TRAV17A0A0B4J275 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC2.3□□□□□ -2.04
TRAV17A0A0B4J275 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC2.3□□□□□ -2.04
TRAV17A0A0B4J275 RPL23AP84-201ENST00000571193 464 ntBASIC2.3□□□□□ -2.04
TRAV17A0A0B4J275 MIR4474-201ENST00000579189 78 ntBASIC2.3□□□□□ -2.04
TRAV17A0A0B4J275 AL157700.1-201ENST00000561973 1432 ntBASIC2.3□□□□□ -2.04
TRAV17A0A0B4J275 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
TRAV17A0A0B4J275 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
TRAV17A0A0B4J275 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
TRAV17A0A0B4J275 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC2.29□□□□□ -2.04
TRAV17A0A0B4J275 AL161431.1-201ENST00000618966 4205 ntBASIC2.29□□□□□ -2.04
TRAV17A0A0B4J275 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
TRAV17A0A0B4J275 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
TRAV17A0A0B4J275 MIR153-1-201ENST00000384914 90 ntBASIC2.29□□□□□ -2.04
TRAV17A0A0B4J275 AL590290.1-201ENST00000405336 380 ntBASIC2.29□□□□□ -2.04
TRAV17A0A0B4J275 MTCYBP7-201ENST00000419540 1134 ntBASIC2.29□□□□□ -2.04
TRAV17A0A0B4J275 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC2.29□□□□□ -2.04
TRAV17A0A0B4J275 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC2.29□□□□□ -2.04
TRAV17A0A0B4J275 BX276092.4-201ENST00000452056 248 ntBASIC2.29□□□□□ -2.04
TRAV17A0A0B4J275 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC2.29□□□□□ -2.04
TRAV17A0A0B4J275 RN7SL499P-201ENST00000481141 276 ntBASIC2.29□□□□□ -2.04
TRAV17A0A0B4J275 YWHAEP4-201ENST00000505390 198 ntBASIC2.29□□□□□ -2.04
TRAV17A0A0B4J275 ANXA2P1-201ENST00000505539 926 ntBASIC2.29□□□□□ -2.04
TRAV17A0A0B4J275 AC008549.1-201ENST00000512900 643 ntBASIC2.29□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms