Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
PCDH9Q9HC56 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
PCDH9Q9HC56 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
PCDH9Q9HC56 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.96□□□□□ -1.78
PCDH9Q9HC56 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.78
PCDH9Q9HC56 ANKRD20A17P-201ENST00000511745 1330 ntBASIC3.95□□□□□ -1.78
PCDH9Q9HC56 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
PCDH9Q9HC56 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.95□□□□□ -1.78
PCDH9Q9HC56 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.95□□□□□ -1.78
PCDH9Q9HC56 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
PCDH9Q9HC56 ZNF37BP-203ENST00000452306 1352 ntBASIC3.95□□□□□ -1.78
PCDH9Q9HC56 OR4A15-201ENST00000314706 1035 ntBASIC3.95□□□□□ -1.78
PCDH9Q9HC56 SNRPEP3-201ENST00000338402 276 ntBASIC3.95□□□□□ -1.78
PCDH9Q9HC56 Y_RNA.436-201ENST00000384097 102 ntBASIC3.95□□□□□ -1.78
PCDH9Q9HC56 RNU6-921P-201ENST00000384361 107 ntBASIC3.95□□□□□ -1.78
PCDH9Q9HC56 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
PCDH9Q9HC56 MORF4L1P6-201ENST00000418771 268 ntBASIC3.95□□□□□ -1.78
PCDH9Q9HC56 SDCBPP2-201ENST00000424643 885 ntBASIC3.95□□□□□ -1.78
PCDH9Q9HC56 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC3.95□□□□□ -1.78
PCDH9Q9HC56 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC3.95□□□□□ -1.78
PCDH9Q9HC56 AC092427.1-201ENST00000439177 601 ntBASIC3.95□□□□□ -1.78
PCDH9Q9HC56 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC3.95□□□□□ -1.78
PCDH9Q9HC56 MTCO1P48-201ENST00000448024 1096 ntBASIC3.95□□□□□ -1.78
PCDH9Q9HC56 ARPC3P2-201ENST00000457786 533 ntBASIC3.95□□□□□ -1.78
PCDH9Q9HC56 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC3.95□□□□□ -1.78
PCDH9Q9HC56 AC068724.1-201ENST00000487100 792 ntBASIC3.95□□□□□ -1.78
PCDH9Q9HC56 AC093267.1-201ENST00000489176 961 ntBASIC3.95□□□□□ -1.78
PCDH9Q9HC56 OR2A20P-203ENST00000498397 1268 ntBASIC3.95□□□□□ -1.78
PCDH9Q9HC56 AC108078.3-201ENST00000502633 489 ntBASIC3.95□□□□□ -1.78
PCDH9Q9HC56 AC010460.1-201ENST00000507087 466 ntBASIC3.95□□□□□ -1.78
PCDH9Q9HC56 MTATP6P22-201ENST00000507369 598 ntBASIC3.95□□□□□ -1.78
PCDH9Q9HC56 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC3.95□□□□□ -1.78
PCDH9Q9HC56 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC3.95□□□□□ -1.78
PCDH9Q9HC56 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC3.95□□□□□ -1.78
PCDH9Q9HC56 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
PCDH9Q9HC56 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC3.95□□□□□ -1.78
PCDH9Q9HC56 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC3.95□□□□□ -1.78
PCDH9Q9HC56 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC3.95□□□□□ -1.78
PCDH9Q9HC56 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC3.95□□□□□ -1.78
PCDH9Q9HC56 ROCK1P1-201ENST00000573767 549 ntBASIC3.95□□□□□ -1.78
PCDH9Q9HC56 MIR3160-1-201ENST00000577972 85 ntBASIC3.95□□□□□ -1.78
PCDH9Q9HC56 AC011260.1-201ENST00000578420 472 ntBASIC3.95□□□□□ -1.78
PCDH9Q9HC56 WISP1-OT1-201ENST00000602893 642 ntBASIC3.95□□□□□ -1.78
PCDH9Q9HC56 AL049634.3-201ENST00000604968 457 ntBASIC3.95□□□□□ -1.78
PCDH9Q9HC56 AC069304.2-201ENST00000605154 435 ntBASIC3.95□□□□□ -1.78
PCDH9Q9HC56 MIR6875-201ENST00000617506 72 ntBASIC3.95□□□□□ -1.78
PCDH9Q9HC56 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC3.95□□□□□ -1.78
PCDH9Q9HC56 PCMTD1P7-201ENST00000634506 357 ntBASIC3.95□□□□□ -1.78
PCDH9Q9HC56 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC3.95□□□□□ -1.78
PCDH9Q9HC56 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
PCDH9Q9HC56 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
PCDH9Q9HC56 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
PCDH9Q9HC56 AC021755.1-201ENST00000559747 1447 ntBASIC3.95□□□□□ -1.78
PCDH9Q9HC56 EXOC5P1-201ENST00000510543 1969 ntBASIC3.94□□□□□ -1.78
PCDH9Q9HC56 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.94□□□□□ -1.78
PCDH9Q9HC56 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
PCDH9Q9HC56 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.94□□□□□ -1.78
PCDH9Q9HC56 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.94□□□□□ -1.78
PCDH9Q9HC56 RNU6-374P-201ENST00000364146 108 ntBASIC3.94□□□□□ -1.78
PCDH9Q9HC56 RNA5SP97-201ENST00000365006 84 ntBASIC3.94□□□□□ -1.78
PCDH9Q9HC56 MT-TH-201ENST00000387441 69 ntBASIC3.94□□□□□ -1.78
PCDH9Q9HC56 AC136624.1-201ENST00000400791 413 ntBASIC3.94□□□□□ -1.78
PCDH9Q9HC56 MIR1183-201ENST00000408856 89 ntBASIC3.94□□□□□ -1.78
PCDH9Q9HC56 RN7SKP263-201ENST00000411194 309 ntBASIC3.94□□□□□ -1.78
PCDH9Q9HC56 BTF3L4P1-201ENST00000413813 468 ntBASIC3.94□□□□□ -1.78
PCDH9Q9HC56 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC3.94□□□□□ -1.78
PCDH9Q9HC56 AC098826.1-201ENST00000433943 471 ntBASIC3.94□□□□□ -1.78
PCDH9Q9HC56 AC023347.2-201ENST00000433994 462 ntBASIC3.94□□□□□ -1.78
PCDH9Q9HC56 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC3.94□□□□□ -1.78
PCDH9Q9HC56 MTCO2P16-201ENST00000436962 677 ntBASIC3.94□□□□□ -1.78
PCDH9Q9HC56 RPL7P28-201ENST00000437739 740 ntBASIC3.94□□□□□ -1.78
PCDH9Q9HC56 SKP1P1-201ENST00000438081 489 ntBASIC3.94□□□□□ -1.78
PCDH9Q9HC56 MTND2P20-201ENST00000440805 661 ntBASIC3.94□□□□□ -1.78
PCDH9Q9HC56 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC3.94□□□□□ -1.78
PCDH9Q9HC56 VN1R10P-201ENST00000447106 875 ntBASIC3.94□□□□□ -1.78
PCDH9Q9HC56 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC3.94□□□□□ -1.78
PCDH9Q9HC56 SNORD108-201ENST00000459332 71 ntBASIC3.94□□□□□ -1.78
PCDH9Q9HC56 MTND4LP3-201ENST00000468320 276 ntBASIC3.94□□□□□ -1.78
PCDH9Q9HC56 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC3.94□□□□□ -1.78
PCDH9Q9HC56 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC3.94□□□□□ -1.78
PCDH9Q9HC56 AC112198.1-201ENST00000505369 1220 ntBASIC3.94□□□□□ -1.78
PCDH9Q9HC56 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.94□□□□□ -1.78
PCDH9Q9HC56 AC110792.2-201ENST00000510278 224 ntBASIC3.94□□□□□ -1.78
PCDH9Q9HC56 AC026412.2-201ENST00000512270 1075 ntBASIC3.94□□□□□ -1.78
PCDH9Q9HC56 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC3.94□□□□□ -1.78
PCDH9Q9HC56 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC3.94□□□□□ -1.78
PCDH9Q9HC56 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC3.94□□□□□ -1.78
PCDH9Q9HC56 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC3.94□□□□□ -1.78
PCDH9Q9HC56 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC3.94□□□□□ -1.78
PCDH9Q9HC56 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC3.94□□□□□ -1.78
PCDH9Q9HC56 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC3.94□□□□□ -1.78
PCDH9Q9HC56 ACTR3BP3-201ENST00000565577 979 ntBASIC3.94□□□□□ -1.78
PCDH9Q9HC56 MIR4286-201ENST00000580651 93 ntBASIC3.94□□□□□ -1.78
PCDH9Q9HC56 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC3.94□□□□□ -1.78
PCDH9Q9HC56 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC3.94□□□□□ -1.78
PCDH9Q9HC56 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.94□□□□□ -1.78
PCDH9Q9HC56 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC3.94□□□□□ -1.78
PCDH9Q9HC56 MAPK10-372ENST00000641954 3413 ntBASIC3.94□□□□□ -1.78
PCDH9Q9HC56 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
PCDH9Q9HC56 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 75.4 ms