Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.22□□□□□ -1.73
SNX18Q96RF0 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC4.22□□□□□ -1.73
SNX18Q96RF0 AL807761.1-201ENST00000417622 171 ntBASIC4.22□□□□□ -1.73
SNX18Q96RF0 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC4.22□□□□□ -1.73
SNX18Q96RF0 Z74021.1-201ENST00000423610 407 ntBASIC4.22□□□□□ -1.73
SNX18Q96RF0 USP9YP36-201ENST00000424581 829 ntBASIC4.22□□□□□ -1.73
SNX18Q96RF0 AL035410.1-201ENST00000427409 427 ntBASIC4.22□□□□□ -1.73
SNX18Q96RF0 ISCA1P6-201ENST00000427740 390 ntBASIC4.22□□□□□ -1.73
SNX18Q96RF0 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC4.22□□□□□ -1.73
SNX18Q96RF0 MTATP6P30-201ENST00000443540 664 ntBASIC4.22□□□□□ -1.73
SNX18Q96RF0 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC4.22□□□□□ -1.73
SNX18Q96RF0 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC4.22□□□□□ -1.73
SNX18Q96RF0 MTCO3P20-201ENST00000454926 688 ntBASIC4.22□□□□□ -1.73
SNX18Q96RF0 AC013267.1-201ENST00000458227 267 ntBASIC4.22□□□□□ -1.73
SNX18Q96RF0 AC063943.1-201ENST00000465434 453 ntBASIC4.22□□□□□ -1.73
SNX18Q96RF0 RPS20P21-201ENST00000466859 343 ntBASIC4.22□□□□□ -1.73
SNX18Q96RF0 RPL31P58-201ENST00000469001 379 ntBASIC4.22□□□□□ -1.73
SNX18Q96RF0 MTND1P3-201ENST00000484956 952 ntBASIC4.22□□□□□ -1.73
SNX18Q96RF0 FAM92A1P2-202ENST00000504766 877 ntBASIC4.22□□□□□ -1.73
SNX18Q96RF0 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC4.22□□□□□ -1.73
SNX18Q96RF0 OR7H2P-201ENST00000513483 306 ntBASIC4.22□□□□□ -1.73
SNX18Q96RF0 AC008694.2-201ENST00000517591 306 ntBASIC4.22□□□□□ -1.73
SNX18Q96RF0 IGLV3-26-201ENST00000520756 302 ntBASIC4.22□□□□□ -1.73
SNX18Q96RF0 AP003122.4-201ENST00000530980 758 ntBASIC4.22□□□□□ -1.73
SNX18Q96RF0 AC092470.1-201ENST00000546187 132 ntBASIC4.22□□□□□ -1.73
SNX18Q96RF0 AC133555.2-201ENST00000550213 292 ntBASIC4.22□□□□□ -1.73
SNX18Q96RF0 AL391840.1-201ENST00000571144 367 ntBASIC4.22□□□□□ -1.73
SNX18Q96RF0 MIR4270-201ENST00000581799 70 ntBASIC4.22□□□□□ -1.73
SNX18Q96RF0 MIR4512-201ENST00000583257 77 ntBASIC4.22□□□□□ -1.73
SNX18Q96RF0 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC4.22□□□□□ -1.73
SNX18Q96RF0 HMGN1P30-201ENST00000589286 268 ntBASIC4.22□□□□□ -1.73
SNX18Q96RF0 RPL7P50-201ENST00000600588 727 ntBASIC4.22□□□□□ -1.73
SNX18Q96RF0 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC4.22□□□□□ -1.73
SNX18Q96RF0 RPL23AP92-201ENST00000603609 255 ntBASIC4.22□□□□□ -1.73
SNX18Q96RF0 AL139286.1-201ENST00000604465 483 ntBASIC4.22□□□□□ -1.73
SNX18Q96RF0 AL161616.1-201ENST00000611867 286 ntBASIC4.22□□□□□ -1.73
SNX18Q96RF0 AL592295.2-201ENST00000612578 206 ntBASIC4.22□□□□□ -1.73
SNX18Q96RF0 UBE2Q2P2-203ENST00000613592 761 ntBASIC4.22□□□□□ -1.73
SNX18Q96RF0 AC019226.1-201ENST00000625666 515 ntBASIC4.22□□□□□ -1.73
SNX18Q96RF0 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
SNX18Q96RF0 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
SNX18Q96RF0 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.22□□□□□ -1.73
SNX18Q96RF0 ZNF33BP1-201ENST00000452497 1834 ntBASIC4.22□□□□□ -1.73
SNX18Q96RF0 AC012618.3-205ENST00000637896 1496 ntBASIC4.22□□□□□ -1.73
SNX18Q96RF0 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
SNX18Q96RF0 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
SNX18Q96RF0 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC4.22□□□□□ -1.73
SNX18Q96RF0 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
SNX18Q96RF0 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
SNX18Q96RF0 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
SNX18Q96RF0 FARSBP1-201ENST00000435808 1778 ntBASIC4.22□□□□□ -1.73
SNX18Q96RF0 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
SNX18Q96RF0 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
SNX18Q96RF0 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
SNX18Q96RF0 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
SNX18Q96RF0 CCT4P2-201ENST00000233836 1548 ntBASIC4.21□□□□□ -1.73
SNX18Q96RF0 AC105074.1-201ENST00000623380 3095 ntBASIC4.21□□□□□ -1.74
SNX18Q96RF0 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
SNX18Q96RF0 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
SNX18Q96RF0 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
SNX18Q96RF0 U8.3-201ENST00000363321 132 ntBASIC4.21□□□□□ -1.74
SNX18Q96RF0 RPL31P1-201ENST00000398116 372 ntBASIC4.21□□□□□ -1.74
SNX18Q96RF0 RPS20P2-201ENST00000402520 389 ntBASIC4.21□□□□□ -1.74
SNX18Q96RF0 BTBD10P2-201ENST00000404779 676 ntBASIC4.21□□□□□ -1.74
SNX18Q96RF0 CCNG1P1-201ENST00000406783 885 ntBASIC4.21□□□□□ -1.74
SNX18Q96RF0 MTATP6P27-201ENST00000416987 621 ntBASIC4.21□□□□□ -1.74
SNX18Q96RF0 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC4.21□□□□□ -1.74
SNX18Q96RF0 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.21□□□□□ -1.74
SNX18Q96RF0 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC4.21□□□□□ -1.74
SNX18Q96RF0 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC4.21□□□□□ -1.74
SNX18Q96RF0 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC4.21□□□□□ -1.74
SNX18Q96RF0 OR4F13P-201ENST00000428478 931 ntBASIC4.21□□□□□ -1.74
SNX18Q96RF0 AC009961.2-201ENST00000435771 251 ntBASIC4.21□□□□□ -1.74
SNX18Q96RF0 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC4.21□□□□□ -1.74
SNX18Q96RF0 TPT1P13-201ENST00000449760 499 ntBASIC4.21□□□□□ -1.74
SNX18Q96RF0 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC4.21□□□□□ -1.74
SNX18Q96RF0 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC4.21□□□□□ -1.74
SNX18Q96RF0 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC4.21□□□□□ -1.74
SNX18Q96RF0 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC4.21□□□□□ -1.74
SNX18Q96RF0 AC087312.1-201ENST00000471411 480 ntBASIC4.21□□□□□ -1.74
SNX18Q96RF0 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC4.21□□□□□ -1.74
SNX18Q96RF0 IGLV2-34-201ENST00000490007 283 ntBASIC4.21□□□□□ -1.74
SNX18Q96RF0 AC008897.1-201ENST00000494006 347 ntBASIC4.21□□□□□ -1.74
SNX18Q96RF0 SCARNA22-201ENST00000503991 125 ntBASIC4.21□□□□□ -1.74
SNX18Q96RF0 AC093824.1-201ENST00000508796 343 ntBASIC4.21□□□□□ -1.74
SNX18Q96RF0 AC108043.1-201ENST00000512696 574 ntBASIC4.21□□□□□ -1.74
SNX18Q96RF0 AC010342.1-201ENST00000514047 877 ntBASIC4.21□□□□□ -1.74
SNX18Q96RF0 AC016065.2-201ENST00000514530 444 ntBASIC4.21□□□□□ -1.74
SNX18Q96RF0 RNU2-46P-201ENST00000517038 113 ntBASIC4.21□□□□□ -1.74
SNX18Q96RF0 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC4.21□□□□□ -1.74
SNX18Q96RF0 CENPUP2-201ENST00000555897 1186 ntBASIC4.21□□□□□ -1.74
SNX18Q96RF0 BGLT3-201ENST00000564523 994 ntBASIC4.21□□□□□ -1.74
SNX18Q96RF0 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC4.21□□□□□ -1.74
SNX18Q96RF0 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC4.21□□□□□ -1.74
SNX18Q96RF0 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC4.21□□□□□ -1.74
SNX18Q96RF0 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC4.21□□□□□ -1.74
SNX18Q96RF0 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC4.21□□□□□ -1.74
SNX18Q96RF0 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC4.21□□□□□ -1.74
SNX18Q96RF0 MIR3688-2-201ENST00000636963 87 ntBASIC4.21□□□□□ -1.74
SNX18Q96RF0 THUMPD3P1-201ENST00000506556 1480 ntBASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 94.1 ms