Protein–RNA interactions for Protein: Q96M19

LINC00477, Putative transmembrane protein encoded by LINC00477, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00477Q96M19 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC2.57□□□□□ -2
LINC00477Q96M19 AL357559.1-201ENST00000622228 274 ntBASIC2.57□□□□□ -2
LINC00477Q96M19 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC2.57□□□□□ -2
LINC00477Q96M19 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC2.57□□□□□ -2
LINC00477Q96M19 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC2.57□□□□□ -2
LINC00477Q96M19 AC093010.3-201ENST00000570269 15214 ntBASIC2.57□□□□□ -2
LINC00477Q96M19 AL365440.1-201ENST00000436135 2167 ntBASIC2.57□□□□□ -2
LINC00477Q96M19 MTND5P28-201ENST00000438005 1594 ntBASIC2.57□□□□□ -2
LINC00477Q96M19 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC2.56□□□□□ -2
LINC00477Q96M19 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
LINC00477Q96M19 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC2.56□□□□□ -2
LINC00477Q96M19 AP002088.1-201ENST00000382740 395 ntBASIC2.56□□□□□ -2
LINC00477Q96M19 MIR16-1-201ENST00000385271 89 ntBASIC2.56□□□□□ -2
LINC00477Q96M19 GSTA8P-201ENST00000404253 637 ntBASIC2.56□□□□□ -2
LINC00477Q96M19 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC2.56□□□□□ -2
LINC00477Q96M19 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC2.56□□□□□ -2
LINC00477Q96M19 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC2.56□□□□□ -2
LINC00477Q96M19 OR2B8P-201ENST00000432841 938 ntBASIC2.56□□□□□ -2
LINC00477Q96M19 RPL21P110-201ENST00000433345 446 ntBASIC2.56□□□□□ -2
LINC00477Q96M19 B3GNT2P1-201ENST00000434960 952 ntBASIC2.56□□□□□ -2
LINC00477Q96M19 SNRPEP4-201ENST00000435815 279 ntBASIC2.56□□□□□ -2
LINC00477Q96M19 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC2.56□□□□□ -2
LINC00477Q96M19 Z99714.1-201ENST00000450463 807 ntBASIC2.56□□□□□ -2
LINC00477Q96M19 SUN3-208ENST00000453192 801 ntTSL 5 BASIC2.56□□□□□ -2
LINC00477Q96M19 MRPL42P4-201ENST00000453267 443 ntBASIC2.56□□□□□ -2
LINC00477Q96M19 snoU13.3-201ENST00000459441 104 ntBASIC2.56□□□□□ -2
LINC00477Q96M19 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC2.56□□□□□ -2
LINC00477Q96M19 RN7SL442P-201ENST00000473804 320 ntBASIC2.56□□□□□ -2
LINC00477Q96M19 GTF2IP9-201ENST00000502460 301 ntBASIC2.56□□□□□ -2
LINC00477Q96M19 AC084024.2-201ENST00000503480 791 ntBASIC2.56□□□□□ -2
LINC00477Q96M19 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC2.56□□□□□ -2
LINC00477Q96M19 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC2.56□□□□□ -2
LINC00477Q96M19 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC2.56□□□□□ -2
LINC00477Q96M19 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC2.56□□□□□ -2
LINC00477Q96M19 MIR2276-201ENST00000516886 89 ntBASIC2.56□□□□□ -2
LINC00477Q96M19 HIGD1AP6-201ENST00000521833 279 ntBASIC2.56□□□□□ -2
LINC00477Q96M19 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC2.56□□□□□ -2
LINC00477Q96M19 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC2.56□□□□□ -2
LINC00477Q96M19 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC2.56□□□□□ -2
LINC00477Q96M19 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC2.56□□□□□ -2
LINC00477Q96M19 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC2.56□□□□□ -2
LINC00477Q96M19 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC2.56□□□□□ -2
LINC00477Q96M19 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC2.56□□□□□ -2
LINC00477Q96M19 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC2.56□□□□□ -2
LINC00477Q96M19 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC2.56□□□□□ -2
LINC00477Q96M19 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC2.56□□□□□ -2
LINC00477Q96M19 AGGF1P5-201ENST00000567900 919 ntBASIC2.56□□□□□ -2
LINC00477Q96M19 MTND3P13-201ENST00000574391 343 ntBASIC2.56□□□□□ -2
LINC00477Q96M19 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC2.56□□□□□ -2
LINC00477Q96M19 SNORD84-203ENST00000584275 78 ntBASIC2.56□□□□□ -2
LINC00477Q96M19 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC2.56□□□□□ -2
LINC00477Q96M19 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC2.56□□□□□ -2
LINC00477Q96M19 RNU6-1192P-201ENST00000612197 107 ntBASIC2.56□□□□□ -2
LINC00477Q96M19 AC068831.7-201ENST00000616954 363 ntBASIC2.56□□□□□ -2
LINC00477Q96M19 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC2.56□□□□□ -2
LINC00477Q96M19 RNU6-489P-201ENST00000618289 107 ntBASIC2.56□□□□□ -2
LINC00477Q96M19 AC073476.4-201ENST00000628409 72 ntBASIC2.56□□□□□ -2
LINC00477Q96M19 AC013437.2-201ENST00000639587 677 ntBASIC2.56□□□□□ -2
LINC00477Q96M19 AC106754.1-201ENST00000562632 1513 ntBASIC2.56□□□□□ -2
LINC00477Q96M19 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.56□□□□□ -2
LINC00477Q96M19 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC2.56□□□□□ -2
LINC00477Q96M19 MTND5P7-201ENST00000413558 1798 ntBASIC2.56□□□□□ -2
LINC00477Q96M19 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC2.56□□□□□ -2
LINC00477Q96M19 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.56□□□□□ -2
LINC00477Q96M19 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC2.55□□□□□ -2
LINC00477Q96M19 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.55□□□□□ -2
LINC00477Q96M19 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC2.55□□□□□ -2
LINC00477Q96M19 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
LINC00477Q96M19 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC2.55□□□□□ -2
LINC00477Q96M19 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC2.55□□□□□ -2
LINC00477Q96M19 RNU6-582P-201ENST00000362989 107 ntBASIC2.55□□□□□ -2
LINC00477Q96M19 RN7SKP227-201ENST00000364445 330 ntBASIC2.55□□□□□ -2
LINC00477Q96M19 RNA5SP479-201ENST00000364858 117 ntBASIC2.55□□□□□ -2
LINC00477Q96M19 SNORA73.2-201ENST00000364946 201 ntBASIC2.55□□□□□ -2
LINC00477Q96M19 RNU6-805P-201ENST00000365643 106 ntBASIC2.55□□□□□ -2
LINC00477Q96M19 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC2.55□□□□□ -2
LINC00477Q96M19 SNORD116-23-201ENST00000384645 92 ntBASIC2.55□□□□□ -2
LINC00477Q96M19 MIR525-201ENST00000384978 85 ntBASIC2.55□□□□□ -2
LINC00477Q96M19 AC007066.1-201ENST00000392902 381 ntBASIC2.55□□□□□ -2
LINC00477Q96M19 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
LINC00477Q96M19 RPL7P27-201ENST00000403775 720 ntBASIC2.55□□□□□ -2
LINC00477Q96M19 AC109780.2-201ENST00000413467 845 ntBASIC2.55□□□□□ -2
LINC00477Q96M19 AL136133.1-201ENST00000413694 376 ntBASIC2.55□□□□□ -2
LINC00477Q96M19 AC012065.2-201ENST00000421295 375 ntBASIC2.55□□□□□ -2
LINC00477Q96M19 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC2.55□□□□□ -2
LINC00477Q96M19 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC2.55□□□□□ -2
LINC00477Q96M19 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC2.55□□□□□ -2
LINC00477Q96M19 Z93242.1-201ENST00000427102 353 ntBASIC2.55□□□□□ -2
LINC00477Q96M19 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC2.55□□□□□ -2
LINC00477Q96M19 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC2.55□□□□□ -2
LINC00477Q96M19 ISCA1P2-201ENST00000438679 421 ntBASIC2.55□□□□□ -2
LINC00477Q96M19 FER-202ENST00000438717 1531 ntTSL 2 BASIC2.55□□□□□ -2
LINC00477Q96M19 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC2.55□□□□□ -2
LINC00477Q96M19 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC2.55□□□□□ -2
LINC00477Q96M19 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC2.55□□□□□ -2
LINC00477Q96M19 AC140076.1-201ENST00000449897 361 ntBASIC2.55□□□□□ -2
LINC00477Q96M19 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC2.55□□□□□ -2
LINC00477Q96M19 snoU109.3-201ENST00000459477 145 ntBASIC2.55□□□□□ -2
LINC00477Q96M19 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC2.55□□□□□ -2
LINC00477Q96M19 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC2.55□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 94.6 ms