Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 RN7SKP123-201ENST00000410732 291 ntBASIC2.75□□□□□ -1.97
SHROOM3Q8TF72 MTCO3P43-201ENST00000440974 771 ntBASIC2.75□□□□□ -1.97
SHROOM3Q8TF72 AP002345.1-201ENST00000456493 928 ntBASIC2.75□□□□□ -1.97
SHROOM3Q8TF72 MTND2P30-201ENST00000456663 382 ntBASIC2.75□□□□□ -1.97
SHROOM3Q8TF72 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
SHROOM3Q8TF72 RNA5SP76-201ENST00000516277 87 ntBASIC2.75□□□□□ -1.97
SHROOM3Q8TF72 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC2.75□□□□□ -1.97
SHROOM3Q8TF72 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC2.75□□□□□ -1.97
SHROOM3Q8TF72 AL671309.1-201ENST00000603750 544 ntBASIC2.75□□□□□ -1.97
SHROOM3Q8TF72 AC019131.2-201ENST00000609071 870 ntBASIC2.75□□□□□ -1.97
SHROOM3Q8TF72 AC073592.7-201ENST00000623659 507 ntBASIC2.75□□□□□ -1.97
SHROOM3Q8TF72 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC2.75□□□□□ -1.97
SHROOM3Q8TF72 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
SHROOM3Q8TF72 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC2.74□□□□□ -1.97
SHROOM3Q8TF72 SNORA25.6-201ENST00000364121 118 ntBASIC2.74□□□□□ -1.97
SHROOM3Q8TF72 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC2.74□□□□□ -1.97
SHROOM3Q8TF72 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
SHROOM3Q8TF72 RNU6-1320P-201ENST00000390838 107 ntBASIC2.74□□□□□ -1.97
SHROOM3Q8TF72 RNU6-1269P-201ENST00000391139 107 ntBASIC2.74□□□□□ -1.97
SHROOM3Q8TF72 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC2.74□□□□□ -1.97
SHROOM3Q8TF72 DPH3P2-201ENST00000422618 250 ntBASIC2.74□□□□□ -1.97
SHROOM3Q8TF72 ZNF965P-201ENST00000432501 817 ntBASIC2.74□□□□□ -1.97
SHROOM3Q8TF72 MTND5P8-201ENST00000449817 1083 ntBASIC2.74□□□□□ -1.97
SHROOM3Q8TF72 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC2.74□□□□□ -1.97
SHROOM3Q8TF72 HNRNPDLP3-201ENST00000456745 380 ntBASIC2.74□□□□□ -1.97
SHROOM3Q8TF72 RNU6-599P-201ENST00000459383 107 ntBASIC2.74□□□□□ -1.97
SHROOM3Q8TF72 RNU6-1193P-201ENST00000459461 107 ntBASIC2.74□□□□□ -1.97
SHROOM3Q8TF72 AC133134.1-201ENST00000466800 359 ntBASIC2.74□□□□□ -1.97
SHROOM3Q8TF72 AC083906.5-201ENST00000503722 328 ntBASIC2.74□□□□□ -1.97
SHROOM3Q8TF72 SNORA9.3-201ENST00000516383 129 ntBASIC2.74□□□□□ -1.97
SHROOM3Q8TF72 AC090819.1-201ENST00000523800 1111 ntBASIC2.74□□□□□ -1.97
SHROOM3Q8TF72 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC2.74□□□□□ -1.97
SHROOM3Q8TF72 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC2.74□□□□□ -1.97
SHROOM3Q8TF72 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC2.74□□□□□ -1.97
SHROOM3Q8TF72 MTCO3P13-201ENST00000577757 781 ntBASIC2.74□□□□□ -1.97
SHROOM3Q8TF72 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC2.74□□□□□ -1.97
SHROOM3Q8TF72 AC040174.2-201ENST00000602701 465 ntBASIC2.74□□□□□ -1.97
SHROOM3Q8TF72 OR4H6P-202ENST00000603819 340 ntBASIC2.74□□□□□ -1.97
SHROOM3Q8TF72 AC073111.2-201ENST00000605657 1075 ntBASIC2.74□□□□□ -1.97
SHROOM3Q8TF72 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
SHROOM3Q8TF72 RNU6-368P-201ENST00000620928 107 ntBASIC2.74□□□□□ -1.97
SHROOM3Q8TF72 RNU6-538P-201ENST00000622329 107 ntBASIC2.74□□□□□ -1.97
SHROOM3Q8TF72 PNPT1P2-201ENST00000456768 2050 ntBASIC2.74□□□□□ -1.97
SHROOM3Q8TF72 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC2.74□□□□□ -1.97
SHROOM3Q8TF72 GTF2H2B-203ENST00000508065 1432 ntBASIC2.74□□□□□ -1.97
SHROOM3Q8TF72 AL359715.4-201ENST00000606629 1436 ntBASIC2.74□□□□□ -1.97
SHROOM3Q8TF72 RNU6-883P-201ENST00000384597 107 ntBASIC2.74□□□□□ -1.97
SHROOM3Q8TF72 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.74□□□□□ -1.97
SHROOM3Q8TF72 AL606490.7-201ENST00000433136 191 ntBASIC2.74□□□□□ -1.97
SHROOM3Q8TF72 ARL5AP3-201ENST00000439327 386 ntBASIC2.74□□□□□ -1.97
SHROOM3Q8TF72 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC2.74□□□□□ -1.97
SHROOM3Q8TF72 RPL29P29-201ENST00000448725 423 ntBASIC2.74□□□□□ -1.97
SHROOM3Q8TF72 AC008280.2-201ENST00000455473 307 ntBASIC2.74□□□□□ -1.97
SHROOM3Q8TF72 RPL23AP31-201ENST00000456160 467 ntBASIC2.74□□□□□ -1.97
SHROOM3Q8TF72 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC2.74□□□□□ -1.97
SHROOM3Q8TF72 MTCO1P31-201ENST00000506355 492 ntBASIC2.74□□□□□ -1.97
SHROOM3Q8TF72 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC2.74□□□□□ -1.97
SHROOM3Q8TF72 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.74□□□□□ -1.97
SHROOM3Q8TF72 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC2.74□□□□□ -1.97
SHROOM3Q8TF72 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC2.74□□□□□ -1.97
SHROOM3Q8TF72 AC080188.3-201ENST00000624842 748 ntBASIC2.74□□□□□ -1.97
SHROOM3Q8TF72 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
SHROOM3Q8TF72 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.74□□□□□ -1.97
SHROOM3Q8TF72 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC2.74□□□□□ -1.97
SHROOM3Q8TF72 AC092079.1-201ENST00000558620 1985 ntBASIC2.73□□□□□ -1.97
SHROOM3Q8TF72 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC2.73□□□□□ -1.97
SHROOM3Q8TF72 RNU6-532P-201ENST00000384318 107 ntBASIC2.73□□□□□ -1.97
SHROOM3Q8TF72 MIR34A-201ENST00000385130 110 ntBASIC2.73□□□□□ -1.97
SHROOM3Q8TF72 RPL5P19-201ENST00000404228 893 ntBASIC2.73□□□□□ -1.97
SHROOM3Q8TF72 RNA5SP129-201ENST00000410276 118 ntBASIC2.73□□□□□ -1.97
SHROOM3Q8TF72 RNU2-72P-201ENST00000411175 163 ntBASIC2.73□□□□□ -1.97
SHROOM3Q8TF72 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC2.73□□□□□ -1.97
SHROOM3Q8TF72 AC093084.1-201ENST00000424233 687 ntBASIC2.73□□□□□ -1.97
SHROOM3Q8TF72 MORF4L1P7-201ENST00000426038 703 ntBASIC2.73□□□□□ -1.97
SHROOM3Q8TF72 AC022022.1-201ENST00000430304 178 ntBASIC2.73□□□□□ -1.97
SHROOM3Q8TF72 AC112220.1-201ENST00000434628 355 ntBASIC2.73□□□□□ -1.97
SHROOM3Q8TF72 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC2.73□□□□□ -1.97
SHROOM3Q8TF72 AC103975.1-201ENST00000482506 483 ntBASIC2.73□□□□□ -1.97
SHROOM3Q8TF72 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC2.73□□□□□ -1.97
SHROOM3Q8TF72 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC2.73□□□□□ -1.97
SHROOM3Q8TF72 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.73□□□□□ -1.97
SHROOM3Q8TF72 OR8K2P-201ENST00000524645 927 ntBASIC2.73□□□□□ -1.97
SHROOM3Q8TF72 HIGD1AP10-201ENST00000527837 282 ntBASIC2.73□□□□□ -1.97
SHROOM3Q8TF72 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC2.73□□□□□ -1.97
SHROOM3Q8TF72 AP000867.2-201ENST00000532468 320 ntBASIC2.73□□□□□ -1.97
SHROOM3Q8TF72 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC2.73□□□□□ -1.97
SHROOM3Q8TF72 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC2.73□□□□□ -1.97
SHROOM3Q8TF72 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC2.73□□□□□ -1.97
SHROOM3Q8TF72 AL136520.1-202ENST00000555494 763 ntBASIC2.73□□□□□ -1.97
SHROOM3Q8TF72 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC2.73□□□□□ -1.97
SHROOM3Q8TF72 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC2.73□□□□□ -1.97
SHROOM3Q8TF72 AC092474.3-201ENST00000603022 568 ntBASIC2.73□□□□□ -1.97
SHROOM3Q8TF72 AC098826.3-201ENST00000603823 466 ntBASIC2.73□□□□□ -1.97
SHROOM3Q8TF72 AC242628.1-201ENST00000606810 391 ntBASIC2.73□□□□□ -1.97
SHROOM3Q8TF72 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
SHROOM3Q8TF72 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.73□□□□□ -1.97
SHROOM3Q8TF72 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC2.73□□□□□ -1.97
SHROOM3Q8TF72 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC2.73□□□□□ -1.97
SHROOM3Q8TF72 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
SHROOM3Q8TF72 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms