Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
KRT78Q8N1N4 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
KRT78Q8N1N4 Y_RNA.46-201ENST00000362695 102 ntBASIC4.42□□□□□ -1.7
KRT78Q8N1N4 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.42□□□□□ -1.7
KRT78Q8N1N4 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
KRT78Q8N1N4 RNU6-1042P-201ENST00000384204 107 ntBASIC4.42□□□□□ -1.7
KRT78Q8N1N4 RNU6-517P-201ENST00000384362 110 ntBASIC4.42□□□□□ -1.7
KRT78Q8N1N4 RPS20P2-201ENST00000402520 389 ntBASIC4.42□□□□□ -1.7
KRT78Q8N1N4 Y_RNA.608-201ENST00000410647 95 ntBASIC4.42□□□□□ -1.7
KRT78Q8N1N4 AC007899.1-201ENST00000412776 775 ntBASIC4.42□□□□□ -1.7
KRT78Q8N1N4 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.42□□□□□ -1.7
KRT78Q8N1N4 SPA17P1-201ENST00000416656 452 ntBASIC4.42□□□□□ -1.7
KRT78Q8N1N4 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC4.42□□□□□ -1.7
KRT78Q8N1N4 TEX41-204ENST00000423031 491 ntTSL 4 BASIC4.42□□□□□ -1.7
KRT78Q8N1N4 AL732292.1-201ENST00000426692 226 ntBASIC4.42□□□□□ -1.7
KRT78Q8N1N4 DPPA2P1-201ENST00000428060 556 ntBASIC4.42□□□□□ -1.7
KRT78Q8N1N4 AL360081.1-201ENST00000428299 555 ntBASIC4.42□□□□□ -1.7
KRT78Q8N1N4 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
KRT78Q8N1N4 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC4.42□□□□□ -1.7
KRT78Q8N1N4 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC4.42□□□□□ -1.7
KRT78Q8N1N4 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC4.42□□□□□ -1.7
KRT78Q8N1N4 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC4.42□□□□□ -1.7
KRT78Q8N1N4 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC4.42□□□□□ -1.7
KRT78Q8N1N4 OR9M1P-201ENST00000459641 921 ntBASIC4.42□□□□□ -1.7
KRT78Q8N1N4 SRRM1P2-201ENST00000464531 1192 ntBASIC4.42□□□□□ -1.7
KRT78Q8N1N4 NPM1P41-201ENST00000512920 831 ntBASIC4.42□□□□□ -1.7
KRT78Q8N1N4 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC4.42□□□□□ -1.7
KRT78Q8N1N4 RNU6-1095P-201ENST00000516148 108 ntBASIC4.42□□□□□ -1.7
KRT78Q8N1N4 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC4.42□□□□□ -1.7
KRT78Q8N1N4 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
KRT78Q8N1N4 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
KRT78Q8N1N4 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC4.42□□□□□ -1.7
KRT78Q8N1N4 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.42□□□□□ -1.7
KRT78Q8N1N4 ZNF519P3-201ENST00000557158 1032 ntBASIC4.42□□□□□ -1.7
KRT78Q8N1N4 AC105129.1-201ENST00000560250 297 ntBASIC4.42□□□□□ -1.7
KRT78Q8N1N4 AC068135.2-201ENST00000569293 1028 ntBASIC4.42□□□□□ -1.7
KRT78Q8N1N4 MIR4270-201ENST00000581799 70 ntBASIC4.42□□□□□ -1.7
KRT78Q8N1N4 AC209154.1-201ENST00000582156 337 ntBASIC4.42□□□□□ -1.7
KRT78Q8N1N4 MIR4480-201ENST00000582492 71 ntBASIC4.42□□□□□ -1.7
KRT78Q8N1N4 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC4.42□□□□□ -1.7
KRT78Q8N1N4 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC4.42□□□□□ -1.7
KRT78Q8N1N4 AP003465.2-201ENST00000602571 373 ntBASIC4.42□□□□□ -1.7
KRT78Q8N1N4 AC090181.2-201ENST00000602975 672 ntBASIC4.42□□□□□ -1.7
KRT78Q8N1N4 AC011468.4-201ENST00000603942 409 ntBASIC4.42□□□□□ -1.7
KRT78Q8N1N4 AC121334.2-201ENST00000605387 271 ntBASIC4.42□□□□□ -1.7
KRT78Q8N1N4 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.42□□□□□ -1.7
KRT78Q8N1N4 AC068944.2-201ENST00000610373 403 ntBASIC4.42□□□□□ -1.7
KRT78Q8N1N4 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
KRT78Q8N1N4 AL121873.1-201ENST00000616013 524 ntBASIC4.42□□□□□ -1.7
KRT78Q8N1N4 AC138932.5-201ENST00000617759 563 ntBASIC4.42□□□□□ -1.7
KRT78Q8N1N4 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC4.42□□□□□ -1.7
KRT78Q8N1N4 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC4.42□□□□□ -1.7
KRT78Q8N1N4 AC091953.3-201ENST00000623220 236 ntBASIC4.42□□□□□ -1.7
KRT78Q8N1N4 AL160394.1-201ENST00000624765 724 ntBASIC4.42□□□□□ -1.7
KRT78Q8N1N4 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC4.42□□□□□ -1.7
KRT78Q8N1N4 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
KRT78Q8N1N4 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.42□□□□□ -1.7
KRT78Q8N1N4 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
KRT78Q8N1N4 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
KRT78Q8N1N4 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
KRT78Q8N1N4 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4.41□□□□□ -1.7
KRT78Q8N1N4 AL365440.1-201ENST00000436135 2167 ntBASIC4.41□□□□□ -1.7
KRT78Q8N1N4 AC009902.3-201ENST00000606235 2172 ntBASIC4.41□□□□□ -1.7
KRT78Q8N1N4 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.41□□□□□ -1.7
KRT78Q8N1N4 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
KRT78Q8N1N4 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC4.41□□□□□ -1.7
KRT78Q8N1N4 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
KRT78Q8N1N4 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.41□□□□□ -1.7
KRT78Q8N1N4 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
KRT78Q8N1N4 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC4.41□□□□□ -1.7
KRT78Q8N1N4 SNORA58B-201ENST00000364259 136 ntBASIC4.41□□□□□ -1.7
KRT78Q8N1N4 RNA5SP235-201ENST00000365411 114 ntBASIC4.41□□□□□ -1.7
KRT78Q8N1N4 Y_RNA.359-201ENST00000365498 102 ntBASIC4.41□□□□□ -1.7
KRT78Q8N1N4 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC4.41□□□□□ -1.7
KRT78Q8N1N4 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
KRT78Q8N1N4 RNU6-1181P-201ENST00000384191 106 ntBASIC4.41□□□□□ -1.7
KRT78Q8N1N4 MRPL42P2-201ENST00000403169 426 ntBASIC4.41□□□□□ -1.7
KRT78Q8N1N4 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC4.41□□□□□ -1.7
KRT78Q8N1N4 EI24P1-201ENST00000416584 867 ntBASIC4.41□□□□□ -1.7
KRT78Q8N1N4 MTND1P23-201ENST00000416931 372 ntBASIC4.41□□□□□ -1.7
KRT78Q8N1N4 BEND7P1-201ENST00000422058 457 ntBASIC4.41□□□□□ -1.7
KRT78Q8N1N4 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC4.41□□□□□ -1.7
KRT78Q8N1N4 USP9YP9-201ENST00000429406 715 ntBASIC4.41□□□□□ -1.7
KRT78Q8N1N4 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC4.41□□□□□ -1.7
KRT78Q8N1N4 USP9YP7-201ENST00000436723 430 ntBASIC4.41□□□□□ -1.7
KRT78Q8N1N4 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC4.41□□□□□ -1.7
KRT78Q8N1N4 USP9YP32-201ENST00000452432 430 ntBASIC4.41□□□□□ -1.7
KRT78Q8N1N4 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC4.41□□□□□ -1.7
KRT78Q8N1N4 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC4.41□□□□□ -1.7
KRT78Q8N1N4 ACTR3P3-201ENST00000480448 893 ntBASIC4.41□□□□□ -1.7
KRT78Q8N1N4 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
KRT78Q8N1N4 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC4.41□□□□□ -1.7
KRT78Q8N1N4 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC4.41□□□□□ -1.7
KRT78Q8N1N4 AC079140.3-201ENST00000511111 550 ntBASIC4.41□□□□□ -1.7
KRT78Q8N1N4 HMGN1P28-201ENST00000521340 364 ntBASIC4.41□□□□□ -1.7
KRT78Q8N1N4 OR5M7P-201ENST00000526140 972 ntBASIC4.41□□□□□ -1.7
KRT78Q8N1N4 AP003497.1-201ENST00000528472 562 ntBASIC4.41□□□□□ -1.7
KRT78Q8N1N4 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC4.41□□□□□ -1.7
KRT78Q8N1N4 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC4.41□□□□□ -1.7
KRT78Q8N1N4 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 95.8 ms