Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 AC022034.3-201ENST00000471393 478 ntBASIC4.19□□□□□ -1.74
PTCHD4Q6ZW05 AC008897.1-201ENST00000494006 347 ntBASIC4.19□□□□□ -1.74
PTCHD4Q6ZW05 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC4.19□□□□□ -1.74
PTCHD4Q6ZW05 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC4.19□□□□□ -1.74
PTCHD4Q6ZW05 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.19□□□□□ -1.74
PTCHD4Q6ZW05 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.19□□□□□ -1.74
PTCHD4Q6ZW05 AC093677.1-201ENST00000514414 678 ntBASIC4.19□□□□□ -1.74
PTCHD4Q6ZW05 AC093853.1-201ENST00000515689 483 ntBASIC4.19□□□□□ -1.74
PTCHD4Q6ZW05 Vault.1-201ENST00000516474 102 ntBASIC4.19□□□□□ -1.74
PTCHD4Q6ZW05 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.19□□□□□ -1.74
PTCHD4Q6ZW05 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC4.19□□□□□ -1.74
PTCHD4Q6ZW05 CENPUP2-201ENST00000555897 1186 ntBASIC4.19□□□□□ -1.74
PTCHD4Q6ZW05 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC4.19□□□□□ -1.74
PTCHD4Q6ZW05 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC4.19□□□□□ -1.74
PTCHD4Q6ZW05 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
PTCHD4Q6ZW05 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC4.19□□□□□ -1.74
PTCHD4Q6ZW05 AC087763.1-201ENST00000603391 286 ntBASIC4.19□□□□□ -1.74
PTCHD4Q6ZW05 AC091304.9-201ENST00000612091 226 ntBASIC4.19□□□□□ -1.74
PTCHD4Q6ZW05 AL138721.1-201ENST00000616756 179 ntBASIC4.19□□□□□ -1.74
PTCHD4Q6ZW05 AC073534.2-201ENST00000620377 381 ntBASIC4.19□□□□□ -1.74
PTCHD4Q6ZW05 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC4.19□□□□□ -1.74
PTCHD4Q6ZW05 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.19□□□□□ -1.74
PTCHD4Q6ZW05 MIR6863-201ENST00000636112 90 ntBASIC4.19□□□□□ -1.74
PTCHD4Q6ZW05 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
PTCHD4Q6ZW05 SAGE4P-201ENST00000442271 3381 ntBASIC4.19□□□□□ -1.74
PTCHD4Q6ZW05 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
PTCHD4Q6ZW05 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
PTCHD4Q6ZW05 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC4.19□□□□□ -1.74
PTCHD4Q6ZW05 AC092447.10-201ENST00000620607 1652 ntBASIC4.19□□□□□ -1.74
PTCHD4Q6ZW05 INTS6P1-201ENST00000504674 2530 ntBASIC4.19□□□□□ -1.74
PTCHD4Q6ZW05 AC092125.1-201ENST00000562568 1995 ntBASIC4.18□□□□□ -1.74
PTCHD4Q6ZW05 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
PTCHD4Q6ZW05 AL391684.1-202ENST00000641293 1636 ntBASIC4.18□□□□□ -1.74
PTCHD4Q6ZW05 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
PTCHD4Q6ZW05 RNU4-12P-201ENST00000365233 139 ntBASIC4.18□□□□□ -1.74
PTCHD4Q6ZW05 RNU1-44P-201ENST00000384453 163 ntBASIC4.18□□□□□ -1.74
PTCHD4Q6ZW05 AL049697.2-201ENST00000403708 294 ntBASIC4.18□□□□□ -1.74
PTCHD4Q6ZW05 GSTA9P-201ENST00000406231 611 ntBASIC4.18□□□□□ -1.74
PTCHD4Q6ZW05 RN7SKP167-201ENST00000411047 285 ntBASIC4.18□□□□□ -1.74
PTCHD4Q6ZW05 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC4.18□□□□□ -1.74
PTCHD4Q6ZW05 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC4.18□□□□□ -1.74
PTCHD4Q6ZW05 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC4.18□□□□□ -1.74
PTCHD4Q6ZW05 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC4.18□□□□□ -1.74
PTCHD4Q6ZW05 BX510359.3-201ENST00000422168 306 ntBASIC4.18□□□□□ -1.74
PTCHD4Q6ZW05 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC4.18□□□□□ -1.74
PTCHD4Q6ZW05 USP9YP7-201ENST00000436723 430 ntBASIC4.18□□□□□ -1.74
PTCHD4Q6ZW05 ARPC3P1-201ENST00000437218 533 ntBASIC4.18□□□□□ -1.74
PTCHD4Q6ZW05 AL451074.3-201ENST00000437709 472 ntBASIC4.18□□□□□ -1.74
PTCHD4Q6ZW05 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC4.18□□□□□ -1.74
PTCHD4Q6ZW05 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC4.18□□□□□ -1.74
PTCHD4Q6ZW05 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC4.18□□□□□ -1.74
PTCHD4Q6ZW05 Z99127.3-201ENST00000448158 395 ntBASIC4.18□□□□□ -1.74
PTCHD4Q6ZW05 PSPHP1-201ENST00000450062 261 ntBASIC4.18□□□□□ -1.74
PTCHD4Q6ZW05 PPIAP3-201ENST00000450588 505 ntBASIC4.18□□□□□ -1.74
PTCHD4Q6ZW05 FGF7P6-202ENST00000451282 293 ntBASIC4.18□□□□□ -1.74
PTCHD4Q6ZW05 BX276092.4-201ENST00000452056 248 ntBASIC4.18□□□□□ -1.74
PTCHD4Q6ZW05 USP9YP32-201ENST00000452432 430 ntBASIC4.18□□□□□ -1.74
PTCHD4Q6ZW05 MTCO3P20-201ENST00000454926 688 ntBASIC4.18□□□□□ -1.74
PTCHD4Q6ZW05 RPS5P7-201ENST00000456664 608 ntBASIC4.18□□□□□ -1.74
PTCHD4Q6ZW05 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC4.18□□□□□ -1.74
PTCHD4Q6ZW05 AP001992.1-205ENST00000462248 379 ntBASIC4.18□□□□□ -1.74
PTCHD4Q6ZW05 AC146507.1-201ENST00000468335 354 ntBASIC4.18□□□□□ -1.74
PTCHD4Q6ZW05 AL121769.1-201ENST00000469473 401 ntBASIC4.18□□□□□ -1.74
PTCHD4Q6ZW05 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC4.18□□□□□ -1.74
PTCHD4Q6ZW05 RN7SL808P-201ENST00000496066 299 ntBASIC4.18□□□□□ -1.74
PTCHD4Q6ZW05 SCARNA22-201ENST00000503991 125 ntBASIC4.18□□□□□ -1.74
PTCHD4Q6ZW05 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC4.18□□□□□ -1.74
PTCHD4Q6ZW05 RN7SKP277-201ENST00000516895 283 ntBASIC4.18□□□□□ -1.74
PTCHD4Q6ZW05 IGLVIV-53-201ENST00000520107 367 ntBASIC4.18□□□□□ -1.74
PTCHD4Q6ZW05 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC4.18□□□□□ -1.74
PTCHD4Q6ZW05 AC021006.3-201ENST00000530771 192 ntBASIC4.18□□□□□ -1.74
PTCHD4Q6ZW05 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.18□□□□□ -1.74
PTCHD4Q6ZW05 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.18□□□□□ -1.74
PTCHD4Q6ZW05 MEG8-218ENST00000556720 456 ntTSL 3 BASIC4.18□□□□□ -1.74
PTCHD4Q6ZW05 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC4.18□□□□□ -1.74
PTCHD4Q6ZW05 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC4.18□□□□□ -1.74
PTCHD4Q6ZW05 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC4.18□□□□□ -1.74
PTCHD4Q6ZW05 AC034268.2-201ENST00000571784 482 ntBASIC4.18□□□□□ -1.74
PTCHD4Q6ZW05 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC4.18□□□□□ -1.74
PTCHD4Q6ZW05 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC4.18□□□□□ -1.74
PTCHD4Q6ZW05 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC4.18□□□□□ -1.74
PTCHD4Q6ZW05 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC4.18□□□□□ -1.74
PTCHD4Q6ZW05 AC007566.2-201ENST00000603642 413 ntBASIC4.18□□□□□ -1.74
PTCHD4Q6ZW05 AL445222.1-201ENST00000607259 628 ntBASIC4.18□□□□□ -1.74
PTCHD4Q6ZW05 AL355073.2-201ENST00000612106 557 ntBASIC4.18□□□□□ -1.74
PTCHD4Q6ZW05 AL592295.2-201ENST00000612578 206 ntBASIC4.18□□□□□ -1.74
PTCHD4Q6ZW05 AC016769.4-201ENST00000616893 535 ntBASIC4.18□□□□□ -1.74
PTCHD4Q6ZW05 AC022306.2-201ENST00000617563 647 ntBASIC4.18□□□□□ -1.74
PTCHD4Q6ZW05 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
PTCHD4Q6ZW05 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC4.18□□□□□ -1.74
PTCHD4Q6ZW05 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.18□□□□□ -1.74
PTCHD4Q6ZW05 AC109780.1-201ENST00000451768 1344 ntBASIC4.18□□□□□ -1.74
PTCHD4Q6ZW05 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC4.18□□□□□ -1.74
PTCHD4Q6ZW05 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC4.18□□□□□ -1.74
PTCHD4Q6ZW05 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.18□□□□□ -1.74
PTCHD4Q6ZW05 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC4.18□□□□□ -1.74
PTCHD4Q6ZW05 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.17□□□□□ -1.74
PTCHD4Q6ZW05 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.17□□□□□ -1.74
PTCHD4Q6ZW05 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
PTCHD4Q6ZW05 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.17□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 83.8 ms