Protein–RNA interactions for Protein: Q53GG5

PDLIM3, PDZ and LIM domain protein 3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3Q53GG5 RPEP2-201ENST00000432149 701 ntBASIC3.53□□□□□ -1.84
PDLIM3Q53GG5 ELOCP18-201ENST00000434209 337 ntBASIC3.53□□□□□ -1.84
PDLIM3Q53GG5 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC3.53□□□□□ -1.84
PDLIM3Q53GG5 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC3.53□□□□□ -1.84
PDLIM3Q53GG5 ELOCP8-201ENST00000439309 332 ntBASIC3.53□□□□□ -1.84
PDLIM3Q53GG5 UBE2V1P3-201ENST00000439651 417 ntBASIC3.53□□□□□ -1.84
PDLIM3Q53GG5 UBE2D3P4-201ENST00000441973 436 ntBASIC3.53□□□□□ -1.84
PDLIM3Q53GG5 ELOCP15-201ENST00000442090 332 ntBASIC3.53□□□□□ -1.84
PDLIM3Q53GG5 MTCYBP3-201ENST00000445588 1137 ntBASIC3.53□□□□□ -1.84
PDLIM3Q53GG5 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC3.53□□□□□ -1.84
PDLIM3Q53GG5 AL133547.1-201ENST00000448546 220 ntBASIC3.53□□□□□ -1.84
PDLIM3Q53GG5 RPL21P104-201ENST00000464143 478 ntBASIC3.53□□□□□ -1.84
PDLIM3Q53GG5 BZW1P2-201ENST00000473537 826 ntBASIC3.53□□□□□ -1.84
PDLIM3Q53GG5 KLRA1P-201ENST00000503499 986 ntBASIC3.53□□□□□ -1.84
PDLIM3Q53GG5 AC026427.2-201ENST00000506228 536 ntBASIC3.53□□□□□ -1.84
PDLIM3Q53GG5 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC3.53□□□□□ -1.84
PDLIM3Q53GG5 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC3.53□□□□□ -1.84
PDLIM3Q53GG5 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC3.53□□□□□ -1.84
PDLIM3Q53GG5 AC104986.1-201ENST00000517978 436 ntBASIC3.53□□□□□ -1.84
PDLIM3Q53GG5 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC3.53□□□□□ -1.84
PDLIM3Q53GG5 DEFB131D-201ENST00000526803 184 ntBASIC3.53□□□□□ -1.84
PDLIM3Q53GG5 AC091515.1-201ENST00000548110 679 ntBASIC3.53□□□□□ -1.84
PDLIM3Q53GG5 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC3.53□□□□□ -1.84
PDLIM3Q53GG5 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC3.53□□□□□ -1.84
PDLIM3Q53GG5 CYCSP2-201ENST00000558168 301 ntBASIC3.53□□□□□ -1.84
PDLIM3Q53GG5 AC009101.1-201ENST00000568135 242 ntBASIC3.53□□□□□ -1.84
PDLIM3Q53GG5 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC3.53□□□□□ -1.84
PDLIM3Q53GG5 AC008088.1-201ENST00000580993 280 ntBASIC3.53□□□□□ -1.84
PDLIM3Q53GG5 MIR4513-201ENST00000581077 86 ntBASIC3.53□□□□□ -1.84
PDLIM3Q53GG5 MIR4637-201ENST00000582405 84 ntBASIC3.53□□□□□ -1.84
PDLIM3Q53GG5 AC090425.2-201ENST00000608818 501 ntBASIC3.53□□□□□ -1.84
PDLIM3Q53GG5 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC3.53□□□□□ -1.84
PDLIM3Q53GG5 AC096577.2-201ENST00000611455 153 ntBASIC3.53□□□□□ -1.84
PDLIM3Q53GG5 AC012314.7-201ENST00000619693 93 ntBASIC3.53□□□□□ -1.84
PDLIM3Q53GG5 AC039056.2-201ENST00000622261 511 ntBASIC3.53□□□□□ -1.84
PDLIM3Q53GG5 AF246928.1-201ENST00000623768 87 ntBASIC3.53□□□□□ -1.84
PDLIM3Q53GG5 AC112484.5-201ENST00000624189 228 ntBASIC3.53□□□□□ -1.84
PDLIM3Q53GG5 AL356596.1-201ENST00000624230 379 ntBASIC3.53□□□□□ -1.84
PDLIM3Q53GG5 AC007494.3-201ENST00000624660 743 ntBASIC3.53□□□□□ -1.84
PDLIM3Q53GG5 SPATA31D2P-201ENST00000429999 4388 ntBASIC3.53□□□□□ -1.84
PDLIM3Q53GG5 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
PDLIM3Q53GG5 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.53□□□□□ -1.85
PDLIM3Q53GG5 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.53□□□□□ -1.85
PDLIM3Q53GG5 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
PDLIM3Q53GG5 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.52□□□□□ -1.85
PDLIM3Q53GG5 MAPK10-373ENST00000641983 6772 ntBASIC3.52□□□□□ -1.85
PDLIM3Q53GG5 AP001148.1-201ENST00000624124 2359 ntBASIC3.52□□□□□ -1.85
PDLIM3Q53GG5 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
PDLIM3Q53GG5 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
PDLIM3Q53GG5 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
PDLIM3Q53GG5 MIR3065-201ENST00000390137 79 ntBASIC3.52□□□□□ -1.85
PDLIM3Q53GG5 SLC9B1P2-201ENST00000398120 1184 ntBASIC3.52□□□□□ -1.85
PDLIM3Q53GG5 CYCSP45-201ENST00000402289 315 ntBASIC3.52□□□□□ -1.85
PDLIM3Q53GG5 AC093578.1-201ENST00000415219 368 ntBASIC3.52□□□□□ -1.85
PDLIM3Q53GG5 RPL7P30-201ENST00000420888 709 ntBASIC3.52□□□□□ -1.85
PDLIM3Q53GG5 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC3.52□□□□□ -1.85
PDLIM3Q53GG5 MTND4P20-201ENST00000424125 869 ntBASIC3.52□□□□□ -1.85
PDLIM3Q53GG5 AL117339.2-201ENST00000430475 180 ntBASIC3.52□□□□□ -1.85
PDLIM3Q53GG5 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC3.52□□□□□ -1.85
PDLIM3Q53GG5 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC3.52□□□□□ -1.85
PDLIM3Q53GG5 AC026410.2-201ENST00000460281 156 ntBASIC3.52□□□□□ -1.85
PDLIM3Q53GG5 RPL21P126-201ENST00000470049 478 ntBASIC3.52□□□□□ -1.85
PDLIM3Q53GG5 AC078785.3-201ENST00000476607 425 ntBASIC3.52□□□□□ -1.85
PDLIM3Q53GG5 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC3.52□□□□□ -1.85
PDLIM3Q53GG5 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC3.52□□□□□ -1.85
PDLIM3Q53GG5 AC017037.1-201ENST00000508460 471 ntBASIC3.52□□□□□ -1.85
PDLIM3Q53GG5 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC3.52□□□□□ -1.85
PDLIM3Q53GG5 NPM1P41-201ENST00000512920 831 ntBASIC3.52□□□□□ -1.85
PDLIM3Q53GG5 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC3.52□□□□□ -1.85
PDLIM3Q53GG5 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC3.52□□□□□ -1.85
PDLIM3Q53GG5 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC3.52□□□□□ -1.85
PDLIM3Q53GG5 MTCYBP41-201ENST00000528913 1123 ntBASIC3.52□□□□□ -1.85
PDLIM3Q53GG5 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC3.52□□□□□ -1.85
PDLIM3Q53GG5 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC3.52□□□□□ -1.85
PDLIM3Q53GG5 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC3.52□□□□□ -1.85
PDLIM3Q53GG5 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC3.52□□□□□ -1.85
PDLIM3Q53GG5 AC090888.1-201ENST00000561335 1141 ntBASIC3.52□□□□□ -1.85
PDLIM3Q53GG5 ISCA1P3-201ENST00000577104 373 ntBASIC3.52□□□□□ -1.85
PDLIM3Q53GG5 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC3.52□□□□□ -1.85
PDLIM3Q53GG5 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC3.52□□□□□ -1.85
PDLIM3Q53GG5 AC068790.5-201ENST00000602741 355 ntBASIC3.52□□□□□ -1.85
PDLIM3Q53GG5 Z99497.2-201ENST00000603634 310 ntBASIC3.52□□□□□ -1.85
PDLIM3Q53GG5 CLPTM1LP1-201ENST00000604519 484 ntBASIC3.52□□□□□ -1.85
PDLIM3Q53GG5 AC006023.2-201ENST00000609916 167 ntBASIC3.52□□□□□ -1.85
PDLIM3Q53GG5 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.52□□□□□ -1.85
PDLIM3Q53GG5 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.52□□□□□ -1.85
PDLIM3Q53GG5 AC007546.1-201ENST00000619452 559 ntBASIC3.52□□□□□ -1.85
PDLIM3Q53GG5 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC3.52□□□□□ -1.85
PDLIM3Q53GG5 MIR4727-201ENST00000622232 55 ntBASIC3.52□□□□□ -1.85
PDLIM3Q53GG5 AC006065.6-201ENST00000625201 545 ntBASIC3.52□□□□□ -1.85
PDLIM3Q53GG5 AC092192.1-201ENST00000633154 1018 ntBASIC3.52□□□□□ -1.85
PDLIM3Q53GG5 CYP3A51P-201ENST00000633513 256 ntBASIC3.52□□□□□ -1.85
PDLIM3Q53GG5 MTCO1P23-201ENST00000415223 1526 ntBASIC3.52□□□□□ -1.85
PDLIM3Q53GG5 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC3.52□□□□□ -1.85
PDLIM3Q53GG5 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
PDLIM3Q53GG5 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
PDLIM3Q53GG5 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
PDLIM3Q53GG5 AC116096.1-201ENST00000566804 2314 ntBASIC3.52□□□□□ -1.85
PDLIM3Q53GG5 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
PDLIM3Q53GG5 ZNF33BP1-201ENST00000452497 1834 ntBASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 11 ms