Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 RNU6-201P-201ENST00000517100 61 ntBASIC4.12□□□□□ -1.75
RAE1P78406 RN7SKP234-201ENST00000517173 224 ntBASIC4.12□□□□□ -1.75
RAE1P78406 AC134698.5-201ENST00000519444 336 ntBASIC4.12□□□□□ -1.75
RAE1P78406 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC4.12□□□□□ -1.75
RAE1P78406 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC4.12□□□□□ -1.75
RAE1P78406 AP003122.4-201ENST00000530980 758 ntBASIC4.12□□□□□ -1.75
RAE1P78406 OR5AN2P-201ENST00000534535 896 ntBASIC4.12□□□□□ -1.75
RAE1P78406 AL161713.1-201ENST00000555538 145 ntBASIC4.12□□□□□ -1.75
RAE1P78406 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC4.12□□□□□ -1.75
RAE1P78406 AC068831.4-201ENST00000556118 109 ntBASIC4.12□□□□□ -1.75
RAE1P78406 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC4.12□□□□□ -1.75
RAE1P78406 ZNF519P2-201ENST00000557032 169 ntBASIC4.12□□□□□ -1.75
RAE1P78406 AL157394.1-201ENST00000562983 1224 ntBASIC4.12□□□□□ -1.75
RAE1P78406 TPRKBP2-201ENST00000565969 475 ntBASIC4.12□□□□□ -1.75
RAE1P78406 AC034268.2-201ENST00000571784 482 ntBASIC4.12□□□□□ -1.75
RAE1P78406 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC4.12□□□□□ -1.75
RAE1P78406 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC4.12□□□□□ -1.75
RAE1P78406 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC4.12□□□□□ -1.75
RAE1P78406 AC087283.1-201ENST00000604029 1074 ntBASIC4.12□□□□□ -1.75
RAE1P78406 AL031666.3-201ENST00000609320 1006 ntBASIC4.12□□□□□ -1.75
RAE1P78406 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
RAE1P78406 AC072046.2-201ENST00000618366 268 ntBASIC4.12□□□□□ -1.75
RAE1P78406 PISRT1-201ENST00000626175 531 ntBASIC4.12□□□□□ -1.75
RAE1P78406 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC4.12□□□□□ -1.75
RAE1P78406 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
RAE1P78406 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC4.12□□□□□ -1.75
RAE1P78406 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC4.12□□□□□ -1.75
RAE1P78406 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
RAE1P78406 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
RAE1P78406 AC093536.2-201ENST00000565257 1406 ntBASIC4.12□□□□□ -1.75
RAE1P78406 AL139811.1-201ENST00000424779 2299 ntBASIC4.11□□□□□ -1.75
RAE1P78406 AC091046.3-201ENST00000631455 1574 ntBASIC4.11□□□□□ -1.75
RAE1P78406 AL592437.2-201ENST00000421655 2434 ntBASIC4.11□□□□□ -1.75
RAE1P78406 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
RAE1P78406 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
RAE1P78406 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.11□□□□□ -1.75
RAE1P78406 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.11□□□□□ -1.75
RAE1P78406 OR4G2P-201ENST00000328113 903 ntBASIC4.11□□□□□ -1.75
RAE1P78406 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
RAE1P78406 RNVU1-3-201ENST00000364313 161 ntBASIC4.11□□□□□ -1.75
RAE1P78406 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.11□□□□□ -1.75
RAE1P78406 RNU6-339P-201ENST00000384310 107 ntBASIC4.11□□□□□ -1.75
RAE1P78406 RNA5SP332-201ENST00000391063 115 ntBASIC4.11□□□□□ -1.75
RAE1P78406 U3.29-201ENST00000391296 212 ntBASIC4.11□□□□□ -1.75
RAE1P78406 MTND4LP20-201ENST00000402379 270 ntBASIC4.11□□□□□ -1.75
RAE1P78406 FCF1P10-201ENST00000407590 479 ntBASIC4.11□□□□□ -1.75
RAE1P78406 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC4.11□□□□□ -1.75
RAE1P78406 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.11□□□□□ -1.75
RAE1P78406 SPA17P1-201ENST00000416656 452 ntBASIC4.11□□□□□ -1.75
RAE1P78406 RPL36AP36-201ENST00000418616 301 ntBASIC4.11□□□□□ -1.75
RAE1P78406 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.11□□□□□ -1.75
RAE1P78406 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC4.11□□□□□ -1.75
RAE1P78406 ISCA1P1-201ENST00000426679 387 ntBASIC4.11□□□□□ -1.75
RAE1P78406 PSMA2P3-201ENST00000429685 675 ntBASIC4.11□□□□□ -1.75
RAE1P78406 TRAPPC2P9-201ENST00000434556 343 ntBASIC4.11□□□□□ -1.75
RAE1P78406 AC009961.2-201ENST00000435771 251 ntBASIC4.11□□□□□ -1.75
RAE1P78406 HMGB3P9-201ENST00000441799 583 ntBASIC4.11□□□□□ -1.75
RAE1P78406 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.11□□□□□ -1.75
RAE1P78406 RPL7P52-201ENST00000449200 742 ntBASIC4.11□□□□□ -1.75
RAE1P78406 GAPDHP17-201ENST00000449858 1001 ntBASIC4.11□□□□□ -1.75
RAE1P78406 RGS5-217ENST00000451759 835 ntTSL 3 BASIC4.11□□□□□ -1.75
RAE1P78406 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC4.11□□□□□ -1.75
RAE1P78406 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC4.11□□□□□ -1.75
RAE1P78406 RPS20P32-201ENST00000456044 356 ntBASIC4.11□□□□□ -1.75
RAE1P78406 AP1S2P1-201ENST00000457344 379 ntBASIC4.11□□□□□ -1.75
RAE1P78406 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
RAE1P78406 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC4.11□□□□□ -1.75
RAE1P78406 RPL9P6-201ENST00000492764 598 ntBASIC4.11□□□□□ -1.75
RAE1P78406 MTCO3P44-201ENST00000510977 541 ntBASIC4.11□□□□□ -1.75
RAE1P78406 AC005798.1-201ENST00000513715 387 ntBASIC4.11□□□□□ -1.75
RAE1P78406 HIGD1AP3-201ENST00000515857 278 ntBASIC4.11□□□□□ -1.75
RAE1P78406 DEFB108A-201ENST00000530110 222 ntBASIC4.11□□□□□ -1.75
RAE1P78406 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
RAE1P78406 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
RAE1P78406 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC4.11□□□□□ -1.75
RAE1P78406 AL109766.1-201ENST00000555080 552 ntBASIC4.11□□□□□ -1.75
RAE1P78406 HMGN1P30-201ENST00000589286 268 ntBASIC4.11□□□□□ -1.75
RAE1P78406 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC4.11□□□□□ -1.75
RAE1P78406 VN1R79P-201ENST00000593540 513 ntBASIC4.11□□□□□ -1.75
RAE1P78406 AL009028.1-201ENST00000604895 802 ntBASIC4.11□□□□□ -1.75
RAE1P78406 AC007684.1-201ENST00000609671 477 ntBASIC4.11□□□□□ -1.75
RAE1P78406 AC138649.3-201ENST00000622154 254 ntBASIC4.11□□□□□ -1.75
RAE1P78406 SEPT14P19-203ENST00000633205 211 ntBASIC4.11□□□□□ -1.75
RAE1P78406 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
RAE1P78406 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC4.11□□□□□ -1.75
RAE1P78406 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.11□□□□□ -1.75
RAE1P78406 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.11□□□□□ -1.75
RAE1P78406 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.11□□□□□ -1.75
RAE1P78406 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.11□□□□□ -1.75
RAE1P78406 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
RAE1P78406 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
RAE1P78406 AC012020.1-201ENST00000624541 1728 ntBASIC4.1□□□□□ -1.75
RAE1P78406 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
RAE1P78406 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
RAE1P78406 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
RAE1P78406 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
RAE1P78406 FRG1BP-201ENST00000278882 761 ntBASIC4.1□□□□□ -1.75
RAE1P78406 RNA5SP52-201ENST00000362448 134 ntBASIC4.1□□□□□ -1.75
RAE1P78406 RNA5SP28-201ENST00000363841 119 ntBASIC4.1□□□□□ -1.75
RAE1P78406 RNA5SP175-201ENST00000364275 119 ntBASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms