Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 RNA5SP181-201ENST00000410246 98 ntBASIC2.1□□□□□ -2.07
CKS1BP61024 RNA5SP229-201ENST00000410809 99 ntBASIC2.1□□□□□ -2.07
CKS1BP61024 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC2.1□□□□□ -2.07
CKS1BP61024 CASKP1-201ENST00000412870 582 ntBASIC2.1□□□□□ -2.07
CKS1BP61024 RPS29P4-201ENST00000414733 161 ntBASIC2.1□□□□□ -2.07
CKS1BP61024 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
CKS1BP61024 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC2.1□□□□□ -2.07
CKS1BP61024 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.1□□□□□ -2.07
CKS1BP61024 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.1□□□□□ -2.07
CKS1BP61024 AL389915.1-201ENST00000422463 466 ntBASIC2.1□□□□□ -2.07
CKS1BP61024 AL160175.1-201ENST00000428124 247 ntBASIC2.1□□□□□ -2.07
CKS1BP61024 AC004975.1-201ENST00000428733 208 ntBASIC2.1□□□□□ -2.07
CKS1BP61024 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC2.1□□□□□ -2.07
CKS1BP61024 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC2.1□□□□□ -2.07
CKS1BP61024 AL645638.1-201ENST00000440519 361 ntBASIC2.1□□□□□ -2.07
CKS1BP61024 VN1R34P-201ENST00000447387 883 ntBASIC2.1□□□□□ -2.07
CKS1BP61024 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
CKS1BP61024 RBMY2UP-201ENST00000453474 324 ntBASIC2.1□□□□□ -2.07
CKS1BP61024 RPS15AP34-201ENST00000487776 387 ntBASIC2.1□□□□□ -2.07
CKS1BP61024 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC2.1□□□□□ -2.07
CKS1BP61024 AC110794.1-201ENST00000505816 425 ntBASIC2.1□□□□□ -2.07
CKS1BP61024 AC108157.1-201ENST00000510511 539 ntBASIC2.1□□□□□ -2.07
CKS1BP61024 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.1□□□□□ -2.07
CKS1BP61024 RNA5SP471-201ENST00000516971 106 ntBASIC2.1□□□□□ -2.07
CKS1BP61024 IGKV2D-36-201ENST00000518643 226 ntBASIC2.1□□□□□ -2.07
CKS1BP61024 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC2.1□□□□□ -2.07
CKS1BP61024 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC2.1□□□□□ -2.07
CKS1BP61024 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC2.1□□□□□ -2.07
CKS1BP61024 MAL2-203ENST00000534619 578 ntTSL 4 BASIC2.1□□□□□ -2.07
CKS1BP61024 AC121758.2-201ENST00000553271 193 ntBASIC2.1□□□□□ -2.07
CKS1BP61024 AL121603.1-201ENST00000553815 142 ntBASIC2.1□□□□□ -2.07
CKS1BP61024 AC005476.1-201ENST00000554427 397 ntBASIC2.1□□□□□ -2.07
CKS1BP61024 AC034105.3-201ENST00000565294 442 ntBASIC2.1□□□□□ -2.07
CKS1BP61024 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC2.1□□□□□ -2.07
CKS1BP61024 AC136624.4-201ENST00000573044 370 ntBASIC2.1□□□□□ -2.07
CKS1BP61024 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
CKS1BP61024 AL669831.4-202ENST00000590817 238 ntBASIC2.1□□□□□ -2.07
CKS1BP61024 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC2.1□□□□□ -2.07
CKS1BP61024 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC2.1□□□□□ -2.07
CKS1BP61024 AL034408.1-202ENST00000636088 415 ntBASIC2.1□□□□□ -2.07
CKS1BP61024 AC244258.1-201ENST00000637553 1071 ntBASIC2.1□□□□□ -2.07
CKS1BP61024 AC009093.8-201ENST00000641769 292 ntBASIC2.1□□□□□ -2.07
CKS1BP61024 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
CKS1BP61024 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC2.09□□□□□ -2.07
CKS1BP61024 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC2.09□□□□□ -2.07
CKS1BP61024 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
CKS1BP61024 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
CKS1BP61024 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
CKS1BP61024 RNA5SP119-201ENST00000362715 117 ntBASIC2.09□□□□□ -2.07
CKS1BP61024 AC234772.1-201ENST00000377927 937 ntBASIC2.09□□□□□ -2.07
CKS1BP61024 SNORD15B-201ENST00000384714 146 ntBASIC2.09□□□□□ -2.07
CKS1BP61024 HMGN1P24-201ENST00000412282 298 ntBASIC2.09□□□□□ -2.07
CKS1BP61024 RPS7P15-201ENST00000415804 584 ntBASIC2.09□□□□□ -2.07
CKS1BP61024 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
CKS1BP61024 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC2.09□□□□□ -2.07
CKS1BP61024 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC2.09□□□□□ -2.07
CKS1BP61024 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC2.09□□□□□ -2.07
CKS1BP61024 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
CKS1BP61024 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.09□□□□□ -2.07
CKS1BP61024 AC007389.2-201ENST00000434630 306 ntBASIC2.09□□□□□ -2.07
CKS1BP61024 AL590762.3-201ENST00000436372 640 ntBASIC2.09□□□□□ -2.07
CKS1BP61024 AC122718.1-201ENST00000439448 744 ntBASIC2.09□□□□□ -2.07
CKS1BP61024 AC108734.1-201ENST00000439549 399 ntBASIC2.09□□□□□ -2.07
CKS1BP61024 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC2.09□□□□□ -2.07
CKS1BP61024 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC2.09□□□□□ -2.07
CKS1BP61024 ELOCP23-201ENST00000452014 332 ntBASIC2.09□□□□□ -2.07
CKS1BP61024 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
CKS1BP61024 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC2.09□□□□□ -2.07
CKS1BP61024 RN7SL633P-201ENST00000488974 297 ntBASIC2.09□□□□□ -2.07
CKS1BP61024 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC2.09□□□□□ -2.07
CKS1BP61024 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC2.09□□□□□ -2.07
CKS1BP61024 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC2.09□□□□□ -2.07
CKS1BP61024 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.09□□□□□ -2.07
CKS1BP61024 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC2.09□□□□□ -2.07
CKS1BP61024 AP001804.3-201ENST00000525146 880 ntBASIC2.09□□□□□ -2.07
CKS1BP61024 OR5G4P-201ENST00000525251 760 ntBASIC2.09□□□□□ -2.07
CKS1BP61024 ZDHHC20P3-201ENST00000531576 336 ntBASIC2.09□□□□□ -2.07
CKS1BP61024 OR5B10P-201ENST00000532869 642 ntBASIC2.09□□□□□ -2.07
CKS1BP61024 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC2.09□□□□□ -2.07
CKS1BP61024 POLR2KP1-201ENST00000553226 168 ntBASIC2.09□□□□□ -2.07
CKS1BP61024 AP005205.1-201ENST00000563503 508 ntBASIC2.09□□□□□ -2.07
CKS1BP61024 AC090751.1-201ENST00000566966 267 ntBASIC2.09□□□□□ -2.07
CKS1BP61024 MIR4700-201ENST00000578311 74 ntBASIC2.09□□□□□ -2.07
CKS1BP61024 AC006130.2-201ENST00000586202 326 ntBASIC2.09□□□□□ -2.07
CKS1BP61024 AC067959.1-201ENST00000604334 379 ntBASIC2.09□□□□□ -2.07
CKS1BP61024 AL136363.1-201ENST00000605349 337 ntBASIC2.09□□□□□ -2.07
CKS1BP61024 AC015849.2-201ENST00000605738 409 ntBASIC2.09□□□□□ -2.07
CKS1BP61024 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC2.09□□□□□ -2.07
CKS1BP61024 AC024941.1-201ENST00000612250 334 ntBASIC2.09□□□□□ -2.07
CKS1BP61024 MESTIT1_2.1-201ENST00000616328 235 ntBASIC2.09□□□□□ -2.07
CKS1BP61024 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC2.09□□□□□ -2.07
CKS1BP61024 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC2.09□□□□□ -2.08
CKS1BP61024 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC2.09□□□□□ -2.08
CKS1BP61024 AP000526.1-201ENST00000603308 1388 ntBASIC2.09□□□□□ -2.08
CKS1BP61024 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC2.08□□□□□ -2.08
CKS1BP61024 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.08□□□□□ -2.08
CKS1BP61024 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
CKS1BP61024 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC2.08□□□□□ -2.08
CKS1BP61024 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
CKS1BP61024 AC008669.1-201ENST00000565823 2178 ntBASIC2.08□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms