Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 RNU4-28P-201ENST00000364739 141 ntBASIC3.78□□□□□ -1.8
LHX1P48742 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC3.78□□□□□ -1.8
LHX1P48742 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
LHX1P48742 AC016769.3-201ENST00000396562 315 ntBASIC3.78□□□□□ -1.8
LHX1P48742 RPS24P7-201ENST00000416921 246 ntBASIC3.78□□□□□ -1.8
LHX1P48742 MTCYBP24-201ENST00000420387 1106 ntBASIC3.78□□□□□ -1.8
LHX1P48742 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC3.78□□□□□ -1.8
LHX1P48742 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC3.78□□□□□ -1.8
LHX1P48742 AL451062.2-201ENST00000427515 271 ntBASIC3.78□□□□□ -1.8
LHX1P48742 AC092427.1-201ENST00000439177 601 ntBASIC3.78□□□□□ -1.8
LHX1P48742 ELOCP13-201ENST00000443934 329 ntBASIC3.78□□□□□ -1.8
LHX1P48742 MTCYBP11-201ENST00000447254 1109 ntBASIC3.78□□□□□ -1.8
LHX1P48742 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC3.78□□□□□ -1.8
LHX1P48742 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC3.78□□□□□ -1.8
LHX1P48742 PABPC1P3-201ENST00000469174 459 ntBASIC3.78□□□□□ -1.8
LHX1P48742 RN7SL293P-201ENST00000481765 281 ntBASIC3.78□□□□□ -1.8
LHX1P48742 AC093767.1-201ENST00000504523 156 ntBASIC3.78□□□□□ -1.8
LHX1P48742 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
LHX1P48742 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC3.78□□□□□ -1.8
LHX1P48742 AC091515.1-201ENST00000548110 679 ntBASIC3.78□□□□□ -1.8
LHX1P48742 CBX3P5-201ENST00000552017 521 ntBASIC3.78□□□□□ -1.8
LHX1P48742 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC3.78□□□□□ -1.8
LHX1P48742 MIR4644-201ENST00000579929 84 ntBASIC3.78□□□□□ -1.8
LHX1P48742 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC3.78□□□□□ -1.8
LHX1P48742 AC107952.2-201ENST00000606048 486 ntBASIC3.78□□□□□ -1.8
LHX1P48742 uc_338.32-201ENST00000615087 172 ntBASIC3.78□□□□□ -1.8
LHX1P48742 AC092650.2-201ENST00000619984 902 ntBASIC3.78□□□□□ -1.8
LHX1P48742 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
LHX1P48742 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.78□□□□□ -1.81
LHX1P48742 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
LHX1P48742 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
LHX1P48742 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.77□□□□□ -1.81
LHX1P48742 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
LHX1P48742 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
LHX1P48742 RNA5SP42-201ENST00000364278 115 ntBASIC3.77□□□□□ -1.81
LHX1P48742 SNORD82-201ENST00000365530 70 ntBASIC3.77□□□□□ -1.81
LHX1P48742 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
LHX1P48742 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
LHX1P48742 RNU6-1122P-201ENST00000384449 107 ntBASIC3.77□□□□□ -1.81
LHX1P48742 RNU1-89P-201ENST00000384592 164 ntBASIC3.77□□□□□ -1.81
LHX1P48742 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC3.77□□□□□ -1.81
LHX1P48742 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
LHX1P48742 EIF5P1-201ENST00000400019 1231 ntBASIC3.77□□□□□ -1.81
LHX1P48742 AL138878.1-201ENST00000405131 347 ntBASIC3.77□□□□□ -1.81
LHX1P48742 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC3.77□□□□□ -1.81
LHX1P48742 RN7SKP177-201ENST00000410567 355 ntBASIC3.77□□□□□ -1.81
LHX1P48742 RPS7P15-201ENST00000415804 584 ntBASIC3.77□□□□□ -1.81
LHX1P48742 BX842559.1-201ENST00000419615 532 ntBASIC3.77□□□□□ -1.81
LHX1P48742 AL139421.1-201ENST00000423010 169 ntBASIC3.77□□□□□ -1.81
LHX1P48742 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC3.77□□□□□ -1.81
LHX1P48742 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC3.77□□□□□ -1.81
LHX1P48742 MTND2P20-201ENST00000440805 661 ntBASIC3.77□□□□□ -1.81
LHX1P48742 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC3.77□□□□□ -1.81
LHX1P48742 AL591719.1-201ENST00000444669 744 ntBASIC3.77□□□□□ -1.81
LHX1P48742 PLGLA-201ENST00000465668 449 ntBASIC3.77□□□□□ -1.81
LHX1P48742 OR5H5P-201ENST00000503164 928 ntBASIC3.77□□□□□ -1.81
LHX1P48742 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.77□□□□□ -1.81
LHX1P48742 MTCO3P44-201ENST00000510977 541 ntBASIC3.77□□□□□ -1.81
LHX1P48742 RNU2-27P-201ENST00000516185 142 ntBASIC3.77□□□□□ -1.81
LHX1P48742 RN7SKP287-201ENST00000516546 266 ntBASIC3.77□□□□□ -1.81
LHX1P48742 IGHV3-32-201ENST00000519182 355 ntBASIC3.77□□□□□ -1.81
LHX1P48742 OR4R3P-201ENST00000525084 838 ntBASIC3.77□□□□□ -1.81
LHX1P48742 AP001636.2-201ENST00000525517 696 ntBASIC3.77□□□□□ -1.81
LHX1P48742 AC023050.2-201ENST00000544968 387 ntBASIC3.77□□□□□ -1.81
LHX1P48742 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC3.77□□□□□ -1.81
LHX1P48742 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC3.77□□□□□ -1.81
LHX1P48742 MTATP6P24-201ENST00000576835 677 ntBASIC3.77□□□□□ -1.81
LHX1P48742 AC020914.4-201ENST00000597690 277 ntBASIC3.77□□□□□ -1.81
LHX1P48742 AC025588.2-201ENST00000604851 466 ntBASIC3.77□□□□□ -1.81
LHX1P48742 AC093424.1-201ENST00000604999 338 ntBASIC3.77□□□□□ -1.81
LHX1P48742 AC110741.2-201ENST00000605278 268 ntBASIC3.77□□□□□ -1.81
LHX1P48742 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC3.77□□□□□ -1.81
LHX1P48742 MIR4278-201ENST00000636094 69 ntBASIC3.77□□□□□ -1.81
LHX1P48742 MFSD8-233ENST00000641482 4860 ntBASIC3.77□□□□□ -1.81
LHX1P48742 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
LHX1P48742 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
LHX1P48742 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
LHX1P48742 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
LHX1P48742 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
LHX1P48742 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
LHX1P48742 GDI2P1-201ENST00000429312 1336 ntBASIC3.76□□□□□ -1.81
LHX1P48742 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.76□□□□□ -1.81
LHX1P48742 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC3.76□□□□□ -1.81
LHX1P48742 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
LHX1P48742 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
LHX1P48742 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
LHX1P48742 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
LHX1P48742 Y_RNA.311-201ENST00000365068 96 ntBASIC3.76□□□□□ -1.81
LHX1P48742 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
LHX1P48742 RNU6-339P-201ENST00000384310 107 ntBASIC3.76□□□□□ -1.81
LHX1P48742 Y_RNA.493-201ENST00000384422 102 ntBASIC3.76□□□□□ -1.81
LHX1P48742 RNU6-83P-201ENST00000384568 112 ntBASIC3.76□□□□□ -1.81
LHX1P48742 ARF4P3-201ENST00000397387 509 ntBASIC3.76□□□□□ -1.81
LHX1P48742 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.76□□□□□ -1.81
LHX1P48742 RN7SKP53-201ENST00000411337 315 ntBASIC3.76□□□□□ -1.81
LHX1P48742 AC093578.1-201ENST00000415219 368 ntBASIC3.76□□□□□ -1.81
LHX1P48742 CRYBB2P1-203ENST00000415709 538 ntBASIC3.76□□□□□ -1.81
LHX1P48742 AC245052.5-201ENST00000416320 649 ntBASIC3.76□□□□□ -1.81
LHX1P48742 DBIP2-201ENST00000419076 262 ntBASIC3.76□□□□□ -1.81
LHX1P48742 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC3.76□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms