Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC3.81□□□□□ -1.8
PDGFRAP16234 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC3.81□□□□□ -1.8
PDGFRAP16234 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC3.81□□□□□ -1.8
PDGFRAP16234 RPL7P15-201ENST00000461190 712 ntBASIC3.81□□□□□ -1.8
PDGFRAP16234 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
PDGFRAP16234 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC3.81□□□□□ -1.8
PDGFRAP16234 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
PDGFRAP16234 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC3.81□□□□□ -1.8
PDGFRAP16234 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC3.81□□□□□ -1.8
PDGFRAP16234 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC3.81□□□□□ -1.8
PDGFRAP16234 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.81□□□□□ -1.8
PDGFRAP16234 AP004371.1-201ENST00000525240 214 ntBASIC3.81□□□□□ -1.8
PDGFRAP16234 SMILR-201ENST00000533992 553 ntTSL 4 BASIC3.81□□□□□ -1.8
PDGFRAP16234 AP000619.3-201ENST00000535634 1127 ntBASIC3.81□□□□□ -1.8
PDGFRAP16234 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC3.81□□□□□ -1.8
PDGFRAP16234 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC3.81□□□□□ -1.8
PDGFRAP16234 AADACP1-206ENST00000561502 1193 ntBASIC3.81□□□□□ -1.8
PDGFRAP16234 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC3.81□□□□□ -1.8
PDGFRAP16234 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
PDGFRAP16234 AL132657.2-201ENST00000564417 358 ntBASIC3.81□□□□□ -1.8
PDGFRAP16234 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC3.81□□□□□ -1.8
PDGFRAP16234 LARP7P2-201ENST00000575306 125 ntBASIC3.81□□□□□ -1.8
PDGFRAP16234 MIR5047-201ENST00000579212 100 ntBASIC3.81□□□□□ -1.8
PDGFRAP16234 AC069304.2-201ENST00000605154 435 ntBASIC3.81□□□□□ -1.8
PDGFRAP16234 AC006329.2-201ENST00000611491 394 ntBASIC3.81□□□□□ -1.8
PDGFRAP16234 UGP2-231ENST00000627474 264 ntTSL 5 BASIC3.81□□□□□ -1.8
PDGFRAP16234 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.81□□□□□ -1.8
PDGFRAP16234 AL034408.1-202ENST00000636088 415 ntBASIC3.81□□□□□ -1.8
PDGFRAP16234 AC119674.1-207ENST00000641355 633 ntBASIC3.81□□□□□ -1.8
PDGFRAP16234 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
PDGFRAP16234 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.81□□□□□ -1.8
PDGFRAP16234 AC073073.2-201ENST00000609827 2578 ntBASIC3.81□□□□□ -1.8
PDGFRAP16234 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
PDGFRAP16234 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
PDGFRAP16234 AC007656.2-201ENST00000624902 4547 ntBASIC3.8□□□□□ -1.8
PDGFRAP16234 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
PDGFRAP16234 CEP170P1-201ENST00000502249 4587 ntBASIC3.8□□□□□ -1.8
PDGFRAP16234 ZNF29P-201ENST00000225587 168 ntBASIC3.8□□□□□ -1.8
PDGFRAP16234 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
PDGFRAP16234 RNA5SP258-201ENST00000362750 119 ntBASIC3.8□□□□□ -1.8
PDGFRAP16234 RNA5SP51-201ENST00000364750 119 ntBASIC3.8□□□□□ -1.8
PDGFRAP16234 Y_RNA.408-201ENST00000383987 102 ntBASIC3.8□□□□□ -1.8
PDGFRAP16234 U3.29-201ENST00000391296 212 ntBASIC3.8□□□□□ -1.8
PDGFRAP16234 AP000567.1-201ENST00000406413 156 ntBASIC3.8□□□□□ -1.8
PDGFRAP16234 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC3.8□□□□□ -1.8
PDGFRAP16234 CRYBB2P1-203ENST00000415709 538 ntBASIC3.8□□□□□ -1.8
PDGFRAP16234 AC012065.2-201ENST00000421295 375 ntBASIC3.8□□□□□ -1.8
PDGFRAP16234 AC092648.1-201ENST00000425870 423 ntBASIC3.8□□□□□ -1.8
PDGFRAP16234 NEK4P1-201ENST00000433383 879 ntBASIC3.8□□□□□ -1.8
PDGFRAP16234 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
PDGFRAP16234 HMGB1P12-201ENST00000438594 598 ntBASIC3.8□□□□□ -1.8
PDGFRAP16234 MTND2P20-201ENST00000440805 661 ntBASIC3.8□□□□□ -1.8
PDGFRAP16234 ELOCP13-201ENST00000443934 329 ntBASIC3.8□□□□□ -1.8
PDGFRAP16234 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC3.8□□□□□ -1.8
PDGFRAP16234 AL009048.1-201ENST00000450437 298 ntBASIC3.8□□□□□ -1.8
PDGFRAP16234 SLC31A1P1-201ENST00000451221 567 ntBASIC3.8□□□□□ -1.8
PDGFRAP16234 MTCO3P16-201ENST00000454456 754 ntBASIC3.8□□□□□ -1.8
PDGFRAP16234 RPL21P104-201ENST00000464143 478 ntBASIC3.8□□□□□ -1.8
PDGFRAP16234 AC091564.1-201ENST00000464563 479 ntBASIC3.8□□□□□ -1.8
PDGFRAP16234 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC3.8□□□□□ -1.8
PDGFRAP16234 OR4G11P-201ENST00000492842 939 ntBASIC3.8□□□□□ -1.8
PDGFRAP16234 GTF2IP9-201ENST00000502460 301 ntBASIC3.8□□□□□ -1.8
PDGFRAP16234 ACTR3BP4-201ENST00000503033 1244 ntBASIC3.8□□□□□ -1.8
PDGFRAP16234 AC008837.2-201ENST00000513076 418 ntBASIC3.8□□□□□ -1.8
PDGFRAP16234 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC3.8□□□□□ -1.8
PDGFRAP16234 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC3.8□□□□□ -1.8
PDGFRAP16234 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC3.8□□□□□ -1.8
PDGFRAP16234 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.8□□□□□ -1.8
PDGFRAP16234 AL132857.1-201ENST00000555180 708 ntBASIC3.8□□□□□ -1.8
PDGFRAP16234 RN7SL339P-201ENST00000580597 296 ntBASIC3.8□□□□□ -1.8
PDGFRAP16234 MTCO2P2-201ENST00000591258 225 ntBASIC3.8□□□□□ -1.8
PDGFRAP16234 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC3.8□□□□□ -1.8
PDGFRAP16234 BNIP3P24-201ENST00000593398 557 ntBASIC3.8□□□□□ -1.8
PDGFRAP16234 RPL23AP92-201ENST00000603609 255 ntBASIC3.8□□□□□ -1.8
PDGFRAP16234 MIR92B-201ENST00000607575 96 ntBASIC3.8□□□□□ -1.8
PDGFRAP16234 AC106052.1-201ENST00000608029 497 ntBASIC3.8□□□□□ -1.8
PDGFRAP16234 AC006023.2-201ENST00000609916 167 ntBASIC3.8□□□□□ -1.8
PDGFRAP16234 AL392048.1-201ENST00000613946 534 ntBASIC3.8□□□□□ -1.8
PDGFRAP16234 AC092650.2-201ENST00000619984 902 ntBASIC3.8□□□□□ -1.8
PDGFRAP16234 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
PDGFRAP16234 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.8□□□□□ -1.8
PDGFRAP16234 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.8□□□□□ -1.8
PDGFRAP16234 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.8□□□□□ -1.8
PDGFRAP16234 AC010733.2-201ENST00000589496 5702 ntBASIC3.8□□□□□ -1.8
PDGFRAP16234 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
PDGFRAP16234 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC3.8□□□□□ -1.8
PDGFRAP16234 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
PDGFRAP16234 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.8□□□□□ -1.8
PDGFRAP16234 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
PDGFRAP16234 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
PDGFRAP16234 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
PDGFRAP16234 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
PDGFRAP16234 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
PDGFRAP16234 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC3.79□□□□□ -1.8
PDGFRAP16234 MIR423-201ENST00000362201 94 ntBASIC3.79□□□□□ -1.8
PDGFRAP16234 RNA5SP295-201ENST00000362655 121 ntBASIC3.79□□□□□ -1.8
PDGFRAP16234 AL590084.1-201ENST00000407885 387 ntBASIC3.79□□□□□ -1.8
PDGFRAP16234 AC009237.5-201ENST00000414271 501 ntBASIC3.79□□□□□ -1.8
PDGFRAP16234 TOMM22P1-201ENST00000418578 312 ntBASIC3.79□□□□□ -1.8
PDGFRAP16234 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 92.3 ms