Protein–RNA interactions for Protein: O95602

POLR1A, DNA-directed RNA polymerase I subunit RPA1, humanhuman

Predicted RBP Predictions only

Length 1,720 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1AO95602 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC3.57□□□□□ -1.84
POLR1AO95602 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
POLR1AO95602 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.57□□□□□ -1.84
POLR1AO95602 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
POLR1AO95602 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
POLR1AO95602 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
POLR1AO95602 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.56□□□□□ -1.84
POLR1AO95602 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC3.56□□□□□ -1.84
POLR1AO95602 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC3.56□□□□□ -1.84
POLR1AO95602 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
POLR1AO95602 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC3.56□□□□□ -1.84
POLR1AO95602 RN7SKP210-201ENST00000459176 261 ntBASIC3.56□□□□□ -1.84
POLR1AO95602 SUMO2P4-201ENST00000504193 276 ntBASIC3.56□□□□□ -1.84
POLR1AO95602 RN7SKP282-201ENST00000516824 299 ntBASIC3.56□□□□□ -1.84
POLR1AO95602 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC3.56□□□□□ -1.84
POLR1AO95602 AP001317.1-201ENST00000531194 960 ntBASIC3.56□□□□□ -1.84
POLR1AO95602 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC3.56□□□□□ -1.84
POLR1AO95602 BX664608.1-201ENST00000610519 487 ntBASIC3.56□□□□□ -1.84
POLR1AO95602 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
POLR1AO95602 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
POLR1AO95602 AC022336.2-201ENST00000568966 2538 ntBASIC3.56□□□□□ -1.84
POLR1AO95602 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC3.56□□□□□ -1.84
POLR1AO95602 Y_RNA.140-201ENST00000363474 103 ntBASIC3.56□□□□□ -1.84
POLR1AO95602 Y_RNA.164-201ENST00000363709 102 ntBASIC3.56□□□□□ -1.84
POLR1AO95602 VN1R17P-201ENST00000472048 1090 ntBASIC3.56□□□□□ -1.84
POLR1AO95602 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC3.56□□□□□ -1.84
POLR1AO95602 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.56□□□□□ -1.84
POLR1AO95602 RN7SKP219-201ENST00000516825 296 ntBASIC3.56□□□□□ -1.84
POLR1AO95602 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.56□□□□□ -1.84
POLR1AO95602 AC128657.1-201ENST00000549459 145 ntBASIC3.56□□□□□ -1.84
POLR1AO95602 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC3.56□□□□□ -1.84
POLR1AO95602 U4.3-201ENST00000621047 82 ntBASIC3.56□□□□□ -1.84
POLR1AO95602 AL512643.1-201ENST00000635735 524 ntBASIC3.56□□□□□ -1.84
POLR1AO95602 AC092447.7-201ENST00000422212 1621 ntBASIC3.55□□□□□ -1.84
POLR1AO95602 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
POLR1AO95602 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.55□□□□□ -1.84
POLR1AO95602 RNU6-1159P-201ENST00000362933 107 ntBASIC3.55□□□□□ -1.84
POLR1AO95602 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC3.55□□□□□ -1.84
POLR1AO95602 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC3.55□□□□□ -1.84
POLR1AO95602 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.55□□□□□ -1.84
POLR1AO95602 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
POLR1AO95602 AC010620.2-201ENST00000600135 313 ntBASIC3.55□□□□□ -1.84
POLR1AO95602 AC016590.3-201ENST00000611171 753 ntBASIC3.55□□□□□ -1.84
POLR1AO95602 ATP8A2P3-201ENST00000426792 1536 ntBASIC3.55□□□□□ -1.84
POLR1AO95602 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC3.54□□□□□ -1.84
POLR1AO95602 AC019155.1-201ENST00000382242 574 ntBASIC3.54□□□□□ -1.84
POLR1AO95602 GSTA9P-201ENST00000406231 611 ntBASIC3.54□□□□□ -1.84
POLR1AO95602 AC107081.1-201ENST00000414975 361 ntBASIC3.54□□□□□ -1.84
POLR1AO95602 ARF4P2-201ENST00000430209 526 ntBASIC3.54□□□□□ -1.84
POLR1AO95602 MTND4P2-201ENST00000507767 1203 ntBASIC3.54□□□□□ -1.84
POLR1AO95602 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC3.54□□□□□ -1.84
POLR1AO95602 MIR6845-201ENST00000613182 61 ntBASIC3.54□□□□□ -1.84
POLR1AO95602 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC3.54□□□□□ -1.84
POLR1AO95602 AL024474.1-201ENST00000404655 591 ntBASIC3.53□□□□□ -1.84
POLR1AO95602 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC3.53□□□□□ -1.84
POLR1AO95602 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC3.53□□□□□ -1.84
POLR1AO95602 RPL36AP21-201ENST00000490372 323 ntBASIC3.53□□□□□ -1.84
POLR1AO95602 AC107222.1-201ENST00000510899 637 ntBASIC3.53□□□□□ -1.84
POLR1AO95602 AL136981.2-201ENST00000617319 734 ntBASIC3.53□□□□□ -1.84
POLR1AO95602 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
POLR1AO95602 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC3.53□□□□□ -1.85
POLR1AO95602 AL121882.1-201ENST00000422893 417 ntBASIC3.53□□□□□ -1.85
POLR1AO95602 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC3.53□□□□□ -1.85
POLR1AO95602 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC3.53□□□□□ -1.85
POLR1AO95602 RPL36AP51-201ENST00000487216 318 ntBASIC3.53□□□□□ -1.85
POLR1AO95602 RPS26P24-201ENST00000497656 331 ntBASIC3.53□□□□□ -1.85
POLR1AO95602 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC3.53□□□□□ -1.85
POLR1AO95602 RGS4-209ENST00000531057 544 ntTSL 4 BASIC3.53□□□□□ -1.85
POLR1AO95602 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC3.53□□□□□ -1.85
POLR1AO95602 Z73965.1-201ENST00000623412 2297 ntBASIC3.52□□□□□ -1.85
POLR1AO95602 DCAF13P3-201ENST00000561147 1334 ntBASIC3.52□□□□□ -1.85
POLR1AO95602 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
POLR1AO95602 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
POLR1AO95602 MIR6073-201ENST00000352083 89 ntBASIC3.52□□□□□ -1.85
POLR1AO95602 DEFA7P-201ENST00000382676 285 ntBASIC3.52□□□□□ -1.85
POLR1AO95602 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC3.52□□□□□ -1.85
POLR1AO95602 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC3.52□□□□□ -1.85
POLR1AO95602 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC3.52□□□□□ -1.85
POLR1AO95602 AC103710.2-201ENST00000609912 942 ntBASIC3.52□□□□□ -1.85
POLR1AO95602 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.52□□□□□ -1.85
POLR1AO95602 MIR6873-201ENST00000622788 63 ntBASIC3.52□□□□□ -1.85
POLR1AO95602 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
POLR1AO95602 NSRP1P1-201ENST00000444067 1693 ntBASIC3.52□□□□□ -1.85
POLR1AO95602 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC3.51□□□□□ -1.85
POLR1AO95602 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC3.51□□□□□ -1.85
POLR1AO95602 ANKRD62P1-201ENST00000434304 1623 ntBASIC3.51□□□□□ -1.85
POLR1AO95602 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.51□□□□□ -1.85
POLR1AO95602 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
POLR1AO95602 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC3.51□□□□□ -1.85
POLR1AO95602 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC3.51□□□□□ -1.85
POLR1AO95602 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC3.51□□□□□ -1.85
POLR1AO95602 AP000705.1-201ENST00000454567 350 ntBASIC3.51□□□□□ -1.85
POLR1AO95602 TRBV1-201ENST00000476502 284 ntBASIC3.51□□□□□ -1.85
POLR1AO95602 HIGD1AP10-201ENST00000527837 282 ntBASIC3.51□□□□□ -1.85
POLR1AO95602 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC3.51□□□□□ -1.85
POLR1AO95602 AC023043.3-201ENST00000593113 385 ntBASIC3.51□□□□□ -1.85
POLR1AO95602 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
POLR1AO95602 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
POLR1AO95602 SNORD6-201ENST00000365444 73 ntBASIC3.5□□□□□ -1.85
POLR1AO95602 AL512430.2-201ENST00000406786 339 ntBASIC3.5□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms