Protein–RNA interactions for Protein: O76039

CDKL5, Cyclin-dependent kinase-like 5, humanhuman

Predictions only

Length 1,030 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5O76039 AC017083.3-201ENST00000609955 700 ntBASIC4.8□□□□□ -1.64
CDKL5O76039 AC091834.1-201ENST00000614543 472 ntBASIC4.8□□□□□ -1.64
CDKL5O76039 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CDKL5O76039 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.79□□□□□ -1.64
CDKL5O76039 AC008725.1-201ENST00000605123 2263 ntBASIC4.79□□□□□ -1.64
CDKL5O76039 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CDKL5O76039 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
CDKL5O76039 SNORA60-201ENST00000362396 134 ntBASIC4.79□□□□□ -1.64
CDKL5O76039 Y_RNA.25-201ENST00000362528 102 ntBASIC4.79□□□□□ -1.64
CDKL5O76039 CUBN-201ENST00000377823 705 ntTSL 3 BASIC4.79□□□□□ -1.64
CDKL5O76039 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CDKL5O76039 RNU6-317P-201ENST00000384031 107 ntBASIC4.79□□□□□ -1.64
CDKL5O76039 RNU5A-6P-201ENST00000384136 116 ntBASIC4.79□□□□□ -1.64
CDKL5O76039 MIR93-201ENST00000385024 80 ntBASIC4.79□□□□□ -1.64
CDKL5O76039 SNORD115-47-201ENST00000391226 86 ntBASIC4.79□□□□□ -1.64
CDKL5O76039 AC109780.2-201ENST00000413467 845 ntBASIC4.79□□□□□ -1.64
CDKL5O76039 AC245052.5-201ENST00000416320 649 ntBASIC4.79□□□□□ -1.64
CDKL5O76039 CCDC58P2-201ENST00000417131 366 ntBASIC4.79□□□□□ -1.64
CDKL5O76039 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC4.79□□□□□ -1.64
CDKL5O76039 MTCO3P1-205ENST00000422088 832 ntBASIC4.79□□□□□ -1.64
CDKL5O76039 MTND3P21-201ENST00000433774 331 ntBASIC4.79□□□□□ -1.64
CDKL5O76039 BMS1P19-201ENST00000433925 393 ntBASIC4.79□□□□□ -1.64
CDKL5O76039 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC4.79□□□□□ -1.64
CDKL5O76039 AC006011.1-201ENST00000442758 349 ntBASIC4.79□□□□□ -1.64
CDKL5O76039 AC244505.5-201ENST00000443639 207 ntBASIC4.79□□□□□ -1.64
CDKL5O76039 SLC31A1P1-201ENST00000451221 567 ntBASIC4.79□□□□□ -1.64
CDKL5O76039 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC4.79□□□□□ -1.64
CDKL5O76039 RPL31P58-201ENST00000469001 379 ntBASIC4.79□□□□□ -1.64
CDKL5O76039 RPL23AP71-201ENST00000470966 469 ntBASIC4.79□□□□□ -1.64
CDKL5O76039 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
CDKL5O76039 RPS27AP13-201ENST00000498403 237 ntBASIC4.79□□□□□ -1.64
CDKL5O76039 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC4.79□□□□□ -1.64
CDKL5O76039 AC105252.1-201ENST00000503089 286 ntBASIC4.79□□□□□ -1.64
CDKL5O76039 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC4.79□□□□□ -1.64
CDKL5O76039 AC093824.1-201ENST00000508796 343 ntBASIC4.79□□□□□ -1.64
CDKL5O76039 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CDKL5O76039 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CDKL5O76039 RNU7-143P-201ENST00000516781 65 ntBASIC4.79□□□□□ -1.64
CDKL5O76039 LY96-202ENST00000518893 430 ntTSL 3 BASIC4.79□□□□□ -1.64
CDKL5O76039 HIGD1AP6-201ENST00000521833 279 ntBASIC4.79□□□□□ -1.64
CDKL5O76039 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC4.79□□□□□ -1.64
CDKL5O76039 AC135001.1-201ENST00000544546 283 ntBASIC4.79□□□□□ -1.64
CDKL5O76039 CYCSP2-201ENST00000558168 301 ntBASIC4.79□□□□□ -1.64
CDKL5O76039 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC4.79□□□□□ -1.64
CDKL5O76039 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC4.79□□□□□ -1.64
CDKL5O76039 AC012417.1-201ENST00000582307 1039 ntBASIC4.79□□□□□ -1.64
CDKL5O76039 MIR6748-201ENST00000610433 71 ntBASIC4.79□□□□□ -1.64
CDKL5O76039 uc_338.9-201ENST00000617424 182 ntBASIC4.79□□□□□ -1.64
CDKL5O76039 AP006248.2-201ENST00000623309 592 ntBASIC4.79□□□□□ -1.64
CDKL5O76039 CR381653.2-201ENST00000624041 768 ntBASIC4.79□□□□□ -1.64
CDKL5O76039 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CDKL5O76039 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CDKL5O76039 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
CDKL5O76039 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CDKL5O76039 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC4.79□□□□□ -1.64
CDKL5O76039 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.79□□□□□ -1.64
CDKL5O76039 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CDKL5O76039 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC4.78□□□□□ -1.64
CDKL5O76039 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC4.78□□□□□ -1.64
CDKL5O76039 Y_RNA.256-201ENST00000364594 104 ntBASIC4.78□□□□□ -1.64
CDKL5O76039 SNORA37-201ENST00000384504 129 ntBASIC4.78□□□□□ -1.64
CDKL5O76039 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
CDKL5O76039 SNORA40.3-201ENST00000390964 122 ntBASIC4.78□□□□□ -1.64
CDKL5O76039 AGR3-202ENST00000402239 563 ntTSL 2 BASIC4.78□□□□□ -1.64
CDKL5O76039 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC4.78□□□□□ -1.64
CDKL5O76039 CYP4F29P-201ENST00000420685 446 ntBASIC4.78□□□□□ -1.64
CDKL5O76039 AL953862.1-201ENST00000423016 168 ntBASIC4.78□□□□□ -1.64
CDKL5O76039 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC4.78□□□□□ -1.64
CDKL5O76039 VDAC1P6-201ENST00000430062 855 ntBASIC4.78□□□□□ -1.64
CDKL5O76039 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC4.78□□□□□ -1.64
CDKL5O76039 RAB11AP1-201ENST00000442978 646 ntBASIC4.78□□□□□ -1.64
CDKL5O76039 PDSS1P2-201ENST00000449397 678 ntBASIC4.78□□□□□ -1.64
CDKL5O76039 NF1P3-201ENST00000457709 450 ntBASIC4.78□□□□□ -1.64
CDKL5O76039 RN7SL271P-201ENST00000487601 295 ntBASIC4.78□□□□□ -1.64
CDKL5O76039 RN7SL604P-201ENST00000492589 296 ntBASIC4.78□□□□□ -1.64
CDKL5O76039 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC4.78□□□□□ -1.64
CDKL5O76039 IGKV2-38-201ENST00000517443 247 ntBASIC4.78□□□□□ -1.64
CDKL5O76039 IGKV2-36-201ENST00000519999 223 ntBASIC4.78□□□□□ -1.64
CDKL5O76039 AC027309.2-201ENST00000520566 192 ntBASIC4.78□□□□□ -1.64
CDKL5O76039 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC4.78□□□□□ -1.64
CDKL5O76039 RGS5-218ENST00000526176 574 ntTSL 4 BASIC4.78□□□□□ -1.64
CDKL5O76039 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC4.78□□□□□ -1.64
CDKL5O76039 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC4.78□□□□□ -1.64
CDKL5O76039 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC4.78□□□□□ -1.64
CDKL5O76039 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC4.78□□□□□ -1.64
CDKL5O76039 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.78□□□□□ -1.64
CDKL5O76039 AC124947.2-202ENST00000552735 133 ntBASIC4.78□□□□□ -1.64
CDKL5O76039 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC4.78□□□□□ -1.64
CDKL5O76039 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.78□□□□□ -1.64
CDKL5O76039 AC093519.1-201ENST00000566109 298 ntBASIC4.78□□□□□ -1.64
CDKL5O76039 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC4.78□□□□□ -1.64
CDKL5O76039 HNRNPCP4-201ENST00000571636 900 ntBASIC4.78□□□□□ -1.64
CDKL5O76039 MIR5684-201ENST00000585074 65 ntBASIC4.78□□□□□ -1.64
CDKL5O76039 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC4.78□□□□□ -1.64
CDKL5O76039 AC008638.3-201ENST00000603341 463 ntBASIC4.78□□□□□ -1.64
CDKL5O76039 AL139395.1-201ENST00000603662 160 ntBASIC4.78□□□□□ -1.64
CDKL5O76039 AL451044.1-201ENST00000604867 238 ntBASIC4.78□□□□□ -1.64
CDKL5O76039 RNU6-88P-201ENST00000606801 100 ntBASIC4.78□□□□□ -1.64
CDKL5O76039 AC080013.4-201ENST00000607624 649 ntBASIC4.78□□□□□ -1.64
CDKL5O76039 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 88 ms