Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC3.35□□□□□ -1.87
AP3B1O00203 OR5B10P-201ENST00000532869 642 ntBASIC3.35□□□□□ -1.87
AP3B1O00203 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.35□□□□□ -1.87
AP3B1O00203 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
AP3B1O00203 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC3.35□□□□□ -1.87
AP3B1O00203 LINC00557-201ENST00000563184 1279 ntBASIC3.35□□□□□ -1.87
AP3B1O00203 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC3.35□□□□□ -1.87
AP3B1O00203 FAM60BP-201ENST00000578364 658 ntBASIC3.35□□□□□ -1.87
AP3B1O00203 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC3.35□□□□□ -1.87
AP3B1O00203 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC3.35□□□□□ -1.87
AP3B1O00203 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC3.35□□□□□ -1.87
AP3B1O00203 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC3.35□□□□□ -1.87
AP3B1O00203 AL020997.3-201ENST00000602843 359 ntBASIC3.35□□□□□ -1.87
AP3B1O00203 AC106791.2-201ENST00000604680 391 ntBASIC3.35□□□□□ -1.87
AP3B1O00203 AC127502.3-201ENST00000636170 1206 ntBASIC3.35□□□□□ -1.87
AP3B1O00203 MTND5P7-201ENST00000413558 1798 ntBASIC3.35□□□□□ -1.87
AP3B1O00203 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
AP3B1O00203 Z83843.1-201ENST00000604070 3685 ntBASIC3.34□□□□□ -1.87
AP3B1O00203 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.34□□□□□ -1.87
AP3B1O00203 NUP58P1-201ENST00000502546 1738 ntBASIC3.34□□□□□ -1.87
AP3B1O00203 RNU5D-1-201ENST00000363299 116 ntBASIC3.34□□□□□ -1.87
AP3B1O00203 RNU6-173P-201ENST00000364215 104 ntBASIC3.34□□□□□ -1.87
AP3B1O00203 RNU6-115P-201ENST00000364310 107 ntBASIC3.34□□□□□ -1.87
AP3B1O00203 RNA5SP479-201ENST00000364858 117 ntBASIC3.34□□□□□ -1.87
AP3B1O00203 RNU6-650P-201ENST00000365658 111 ntBASIC3.34□□□□□ -1.87
AP3B1O00203 SNORA1.3-201ENST00000384676 136 ntBASIC3.34□□□□□ -1.87
AP3B1O00203 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC3.34□□□□□ -1.87
AP3B1O00203 AC009969.1-201ENST00000438726 172 ntBASIC3.34□□□□□ -1.87
AP3B1O00203 ELOCP3-201ENST00000439303 348 ntBASIC3.34□□□□□ -1.87
AP3B1O00203 ATP5C1P1-201ENST00000441945 895 ntBASIC3.34□□□□□ -1.87
AP3B1O00203 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.34□□□□□ -1.87
AP3B1O00203 AC125238.1-201ENST00000448842 249 ntBASIC3.34□□□□□ -1.87
AP3B1O00203 NDUFA5P7-201ENST00000452914 242 ntBASIC3.34□□□□□ -1.87
AP3B1O00203 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC3.34□□□□□ -1.87
AP3B1O00203 PABPC1P3-201ENST00000469174 459 ntBASIC3.34□□□□□ -1.87
AP3B1O00203 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC3.34□□□□□ -1.87
AP3B1O00203 PRDX3P4-201ENST00000470828 747 ntBASIC3.34□□□□□ -1.87
AP3B1O00203 AC025518.1-201ENST00000479856 347 ntBASIC3.34□□□□□ -1.87
AP3B1O00203 AC108078.3-201ENST00000502633 489 ntBASIC3.34□□□□□ -1.87
AP3B1O00203 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC3.34□□□□□ -1.87
AP3B1O00203 TRMT10BP1-201ENST00000519377 943 ntBASIC3.34□□□□□ -1.87
AP3B1O00203 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC3.34□□□□□ -1.87
AP3B1O00203 OR4P1P-201ENST00000530808 1136 ntBASIC3.34□□□□□ -1.87
AP3B1O00203 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.34□□□□□ -1.87
AP3B1O00203 AC011611.5-201ENST00000552477 578 ntBASIC3.34□□□□□ -1.87
AP3B1O00203 DNAJC8P1-201ENST00000554535 372 ntBASIC3.34□□□□□ -1.87
AP3B1O00203 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.34□□□□□ -1.87
AP3B1O00203 GAS5-AS1-201ENST00000602767 694 ntBASIC3.34□□□□□ -1.87
AP3B1O00203 AC073657.2-201ENST00000605661 303 ntBASIC3.34□□□□□ -1.87
AP3B1O00203 AC092354.2-201ENST00000607786 514 ntBASIC3.34□□□□□ -1.87
AP3B1O00203 AC107294.3-201ENST00000609211 526 ntBASIC3.34□□□□□ -1.87
AP3B1O00203 AL591516.1-201ENST00000611326 274 ntBASIC3.34□□□□□ -1.87
AP3B1O00203 CR392039.5-201ENST00000623201 510 ntBASIC3.34□□□□□ -1.87
AP3B1O00203 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.87
AP3B1O00203 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
AP3B1O00203 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
AP3B1O00203 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC3.33□□□□□ -1.88
AP3B1O00203 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.33□□□□□ -1.88
AP3B1O00203 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
AP3B1O00203 RNA5SP197-201ENST00000363357 119 ntBASIC3.33□□□□□ -1.88
AP3B1O00203 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
AP3B1O00203 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
AP3B1O00203 RNU6-1027P-201ENST00000383998 107 ntBASIC3.33□□□□□ -1.88
AP3B1O00203 RPS4XP3-201ENST00000398541 413 ntBASIC3.33□□□□□ -1.88
AP3B1O00203 RNA5SP293-201ENST00000410527 113 ntBASIC3.33□□□□□ -1.88
AP3B1O00203 RPS29P4-201ENST00000414733 161 ntBASIC3.33□□□□□ -1.88
AP3B1O00203 NDUFB4P5-201ENST00000415445 361 ntBASIC3.33□□□□□ -1.88
AP3B1O00203 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.33□□□□□ -1.88
AP3B1O00203 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC3.33□□□□□ -1.88
AP3B1O00203 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.33□□□□□ -1.88
AP3B1O00203 KCTD10P1-201ENST00000434203 625 ntBASIC3.33□□□□□ -1.88
AP3B1O00203 HSFY3P-201ENST00000444242 1191 ntBASIC3.33□□□□□ -1.88
AP3B1O00203 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC3.33□□□□□ -1.88
AP3B1O00203 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC3.33□□□□□ -1.88
AP3B1O00203 AL590664.1-201ENST00000448065 339 ntBASIC3.33□□□□□ -1.88
AP3B1O00203 GTF2IP12-201ENST00000456547 356 ntBASIC3.33□□□□□ -1.88
AP3B1O00203 snoU109.4-201ENST00000458953 143 ntBASIC3.33□□□□□ -1.88
AP3B1O00203 ST13P14-201ENST00000474095 734 ntBASIC3.33□□□□□ -1.88
AP3B1O00203 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
AP3B1O00203 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC3.33□□□□□ -1.88
AP3B1O00203 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC3.33□□□□□ -1.88
AP3B1O00203 AC093767.1-201ENST00000504523 156 ntBASIC3.33□□□□□ -1.88
AP3B1O00203 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC3.33□□□□□ -1.88
AP3B1O00203 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC3.33□□□□□ -1.88
AP3B1O00203 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC3.33□□□□□ -1.88
AP3B1O00203 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC3.33□□□□□ -1.88
AP3B1O00203 RNA5SP385-201ENST00000515947 110 ntBASIC3.33□□□□□ -1.88
AP3B1O00203 RN7SKP282-201ENST00000516824 299 ntBASIC3.33□□□□□ -1.88
AP3B1O00203 OR10V3P-201ENST00000525712 725 ntBASIC3.33□□□□□ -1.88
AP3B1O00203 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.33□□□□□ -1.88
AP3B1O00203 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
AP3B1O00203 AP000790.1-201ENST00000528891 737 ntBASIC3.33□□□□□ -1.88
AP3B1O00203 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC3.33□□□□□ -1.88
AP3B1O00203 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC3.33□□□□□ -1.88
AP3B1O00203 EEF1B2P4-201ENST00000551398 348 ntBASIC3.33□□□□□ -1.88
AP3B1O00203 NIFKP8-201ENST00000560500 874 ntBASIC3.33□□□□□ -1.88
AP3B1O00203 MIR5186-201ENST00000577504 120 ntBASIC3.33□□□□□ -1.88
AP3B1O00203 AC090666.1-201ENST00000578241 445 ntBASIC3.33□□□□□ -1.88
AP3B1O00203 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC3.33□□□□□ -1.88
AP3B1O00203 SNORD39.3-201ENST00000584451 71 ntBASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 88.9 ms