Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC4.11□□□□□ -1.75
SNX9Q9Y5X1 AC010307.1-201ENST00000467206 836 ntBASIC4.11□□□□□ -1.75
SNX9Q9Y5X1 AC146507.1-201ENST00000468335 354 ntBASIC4.11□□□□□ -1.75
SNX9Q9Y5X1 RPL7P38-201ENST00000488396 739 ntBASIC4.11□□□□□ -1.75
SNX9Q9Y5X1 OR2A20P-203ENST00000498397 1268 ntBASIC4.11□□□□□ -1.75
SNX9Q9Y5X1 AC091435.1-201ENST00000505442 584 ntBASIC4.11□□□□□ -1.75
SNX9Q9Y5X1 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC4.11□□□□□ -1.75
SNX9Q9Y5X1 AC005178.1-201ENST00000508392 440 ntBASIC4.11□□□□□ -1.75
SNX9Q9Y5X1 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC4.11□□□□□ -1.75
SNX9Q9Y5X1 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC4.11□□□□□ -1.75
SNX9Q9Y5X1 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC4.11□□□□□ -1.75
SNX9Q9Y5X1 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC4.11□□□□□ -1.75
SNX9Q9Y5X1 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC4.11□□□□□ -1.75
SNX9Q9Y5X1 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC4.11□□□□□ -1.75
SNX9Q9Y5X1 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC4.11□□□□□ -1.75
SNX9Q9Y5X1 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC4.11□□□□□ -1.75
SNX9Q9Y5X1 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC4.11□□□□□ -1.75
SNX9Q9Y5X1 AC138915.2-201ENST00000569776 97 ntBASIC4.11□□□□□ -1.75
SNX9Q9Y5X1 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC4.11□□□□□ -1.75
SNX9Q9Y5X1 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC4.11□□□□□ -1.75
SNX9Q9Y5X1 NBR2-204ENST00000587322 63 ntBASIC4.11□□□□□ -1.75
SNX9Q9Y5X1 AL163642.2-201ENST00000604722 1019 ntBASIC4.11□□□□□ -1.75
SNX9Q9Y5X1 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC4.11□□□□□ -1.75
SNX9Q9Y5X1 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC4.11□□□□□ -1.75
SNX9Q9Y5X1 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC4.11□□□□□ -1.75
SNX9Q9Y5X1 AC006065.5-201ENST00000623427 349 ntBASIC4.11□□□□□ -1.75
SNX9Q9Y5X1 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC4.11□□□□□ -1.75
SNX9Q9Y5X1 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC4.11□□□□□ -1.75
SNX9Q9Y5X1 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC4.11□□□□□ -1.75
SNX9Q9Y5X1 ANKRD20A17P-201ENST00000511745 1330 ntBASIC4.11□□□□□ -1.75
SNX9Q9Y5X1 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC4.11□□□□□ -1.75
SNX9Q9Y5X1 UBE3AP2-201ENST00000429033 2259 ntBASIC4.11□□□□□ -1.75
SNX9Q9Y5X1 AL445523.1-201ENST00000451184 1362 ntBASIC4.11□□□□□ -1.75
SNX9Q9Y5X1 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4.11□□□□□ -1.75
SNX9Q9Y5X1 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
SNX9Q9Y5X1 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4.11□□□□□ -1.75
SNX9Q9Y5X1 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.11□□□□□ -1.75
SNX9Q9Y5X1 IPO8P1-201ENST00000455509 3109 ntBASIC4.1□□□□□ -1.75
SNX9Q9Y5X1 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
SNX9Q9Y5X1 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
SNX9Q9Y5X1 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC4.1□□□□□ -1.75
SNX9Q9Y5X1 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
SNX9Q9Y5X1 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC4.1□□□□□ -1.75
SNX9Q9Y5X1 RNU6-251P-201ENST00000363235 104 ntBASIC4.1□□□□□ -1.75
SNX9Q9Y5X1 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC4.1□□□□□ -1.75
SNX9Q9Y5X1 RNU1-89P-201ENST00000384592 164 ntBASIC4.1□□□□□ -1.75
SNX9Q9Y5X1 SNORA57.3-201ENST00000411095 141 ntBASIC4.1□□□□□ -1.75
SNX9Q9Y5X1 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC4.1□□□□□ -1.75
SNX9Q9Y5X1 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
SNX9Q9Y5X1 NUP35P2-201ENST00000416748 943 ntBASIC4.1□□□□□ -1.75
SNX9Q9Y5X1 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC4.1□□□□□ -1.75
SNX9Q9Y5X1 AC092634.6-201ENST00000418558 192 ntBASIC4.1□□□□□ -1.75
SNX9Q9Y5X1 AC087650.1-201ENST00000431445 468 ntBASIC4.1□□□□□ -1.75
SNX9Q9Y5X1 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC4.1□□□□□ -1.75
SNX9Q9Y5X1 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC4.1□□□□□ -1.75
SNX9Q9Y5X1 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC4.1□□□□□ -1.75
SNX9Q9Y5X1 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC4.1□□□□□ -1.75
SNX9Q9Y5X1 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC4.1□□□□□ -1.75
SNX9Q9Y5X1 RPS15AP1-201ENST00000457423 391 ntBASIC4.1□□□□□ -1.75
SNX9Q9Y5X1 AP000873.1-201ENST00000463987 400 ntBASIC4.1□□□□□ -1.75
SNX9Q9Y5X1 MTND1P16-201ENST00000465177 898 ntBASIC4.1□□□□□ -1.75
SNX9Q9Y5X1 RN7SL542P-201ENST00000467147 294 ntBASIC4.1□□□□□ -1.75
SNX9Q9Y5X1 RPL30P6-201ENST00000475925 342 ntBASIC4.1□□□□□ -1.75
SNX9Q9Y5X1 RAD51AP1P1-201ENST00000484195 1001 ntBASIC4.1□□□□□ -1.75
SNX9Q9Y5X1 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC4.1□□□□□ -1.75
SNX9Q9Y5X1 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC4.1□□□□□ -1.75
SNX9Q9Y5X1 LTV1P1-201ENST00000510683 1237 ntBASIC4.1□□□□□ -1.75
SNX9Q9Y5X1 RNU6-1261P-201ENST00000517194 104 ntBASIC4.1□□□□□ -1.75
SNX9Q9Y5X1 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC4.1□□□□□ -1.75
SNX9Q9Y5X1 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC4.1□□□□□ -1.75
SNX9Q9Y5X1 MED28P5-201ENST00000528254 438 ntBASIC4.1□□□□□ -1.75
SNX9Q9Y5X1 REXO2-218ENST00000544827 880 ntTSL 3 BASIC4.1□□□□□ -1.75
SNX9Q9Y5X1 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC4.1□□□□□ -1.75
SNX9Q9Y5X1 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC4.1□□□□□ -1.75
SNX9Q9Y5X1 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC4.1□□□□□ -1.75
SNX9Q9Y5X1 AC112220.3-201ENST00000605502 502 ntBASIC4.1□□□□□ -1.75
SNX9Q9Y5X1 AC135507.1-201ENST00000607214 561 ntBASIC4.1□□□□□ -1.75
SNX9Q9Y5X1 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC4.1□□□□□ -1.75
SNX9Q9Y5X1 AC011939.3-201ENST00000613686 466 ntBASIC4.1□□□□□ -1.75
SNX9Q9Y5X1 AC026634.1-201ENST00000634369 198 ntBASIC4.1□□□□□ -1.75
SNX9Q9Y5X1 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC4.1□□□□□ -1.75
SNX9Q9Y5X1 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
SNX9Q9Y5X1 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.1□□□□□ -1.75
SNX9Q9Y5X1 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
SNX9Q9Y5X1 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
SNX9Q9Y5X1 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC4.1□□□□□ -1.75
SNX9Q9Y5X1 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
SNX9Q9Y5X1 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC4.09□□□□□ -1.75
SNX9Q9Y5X1 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC4.09□□□□□ -1.75
SNX9Q9Y5X1 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
SNX9Q9Y5X1 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
SNX9Q9Y5X1 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.09□□□□□ -1.75
SNX9Q9Y5X1 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
SNX9Q9Y5X1 XPOTP1-201ENST00000443317 2398 ntBASIC4.09□□□□□ -1.75
SNX9Q9Y5X1 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC4.09□□□□□ -1.75
SNX9Q9Y5X1 PARD3-204ENST00000374768 799 ntTSL 3 BASIC4.09□□□□□ -1.75
SNX9Q9Y5X1 TAF9BP1-201ENST00000396646 746 ntBASIC4.09□□□□□ -1.75
SNX9Q9Y5X1 RHEBP3-201ENST00000411920 351 ntBASIC4.09□□□□□ -1.75
SNX9Q9Y5X1 AL022400.1-201ENST00000423946 935 ntBASIC4.09□□□□□ -1.75
SNX9Q9Y5X1 AL591419.1-201ENST00000427423 339 ntBASIC4.09□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 83.6 ms