Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 FTH1P1-201ENST00000437933 532 ntBASIC2.78□□□□□ -1.96
HDHD3Q9BSH5 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC2.78□□□□□ -1.96
HDHD3Q9BSH5 AL009048.1-201ENST00000450437 298 ntBASIC2.78□□□□□ -1.96
HDHD3Q9BSH5 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC2.78□□□□□ -1.96
HDHD3Q9BSH5 NDUFA5P7-201ENST00000452914 242 ntBASIC2.78□□□□□ -1.96
HDHD3Q9BSH5 RPS20P32-201ENST00000456044 356 ntBASIC2.78□□□□□ -1.96
HDHD3Q9BSH5 snoU13.3-201ENST00000459441 104 ntBASIC2.78□□□□□ -1.96
HDHD3Q9BSH5 RPS27P29-201ENST00000463110 252 ntBASIC2.78□□□□□ -1.96
HDHD3Q9BSH5 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC2.78□□□□□ -1.96
HDHD3Q9BSH5 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC2.78□□□□□ -1.96
HDHD3Q9BSH5 TMED11P-201ENST00000479478 690 ntBASIC2.78□□□□□ -1.96
HDHD3Q9BSH5 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC2.78□□□□□ -1.96
HDHD3Q9BSH5 AC134050.1-201ENST00000495088 933 ntBASIC2.78□□□□□ -1.96
HDHD3Q9BSH5 BOLA3P3-201ENST00000505182 232 ntBASIC2.78□□□□□ -1.96
HDHD3Q9BSH5 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC2.78□□□□□ -1.96
HDHD3Q9BSH5 MTCYBP16-201ENST00000509187 1129 ntBASIC2.78□□□□□ -1.96
HDHD3Q9BSH5 TXNP6-201ENST00000510190 310 ntBASIC2.78□□□□□ -1.96
HDHD3Q9BSH5 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC2.78□□□□□ -1.96
HDHD3Q9BSH5 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
HDHD3Q9BSH5 RN7SKP157-201ENST00000516174 282 ntBASIC2.78□□□□□ -1.96
HDHD3Q9BSH5 RNU2-58P-201ENST00000516403 183 ntBASIC2.78□□□□□ -1.96
HDHD3Q9BSH5 IGKV2-26-201ENST00000518305 343 ntBASIC2.78□□□□□ -1.96
HDHD3Q9BSH5 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC2.78□□□□□ -1.96
HDHD3Q9BSH5 AC068657.1-201ENST00000520807 306 ntBASIC2.78□□□□□ -1.96
HDHD3Q9BSH5 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC2.78□□□□□ -1.96
HDHD3Q9BSH5 MEG8-215ENST00000555354 469 ntTSL 3 BASIC2.78□□□□□ -1.96
HDHD3Q9BSH5 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC2.78□□□□□ -1.96
HDHD3Q9BSH5 AC037471.2-201ENST00000564941 598 ntBASIC2.78□□□□□ -1.96
HDHD3Q9BSH5 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC2.78□□□□□ -1.96
HDHD3Q9BSH5 MTND3P13-201ENST00000574391 343 ntBASIC2.78□□□□□ -1.96
HDHD3Q9BSH5 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC2.78□□□□□ -1.96
HDHD3Q9BSH5 AC007566.2-201ENST00000603642 413 ntBASIC2.78□□□□□ -1.96
HDHD3Q9BSH5 AL451086.1-201ENST00000605596 223 ntBASIC2.78□□□□□ -1.96
HDHD3Q9BSH5 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC2.78□□□□□ -1.96
HDHD3Q9BSH5 AC092653.1-201ENST00000608509 531 ntBASIC2.78□□□□□ -1.96
HDHD3Q9BSH5 AL136295.6-201ENST00000610486 658 ntBASIC2.78□□□□□ -1.96
HDHD3Q9BSH5 uc_338.1-201ENST00000612113 180 ntBASIC2.78□□□□□ -1.96
HDHD3Q9BSH5 PART1_2.1-201ENST00000612397 250 ntBASIC2.78□□□□□ -1.96
HDHD3Q9BSH5 AC024257.5-201ENST00000612739 531 ntBASIC2.78□□□□□ -1.96
HDHD3Q9BSH5 OR1S1-201ENST00000624470 978 ntBASIC2.78□□□□□ -1.96
HDHD3Q9BSH5 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC2.78□□□□□ -1.96
HDHD3Q9BSH5 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC2.78□□□□□ -1.96
HDHD3Q9BSH5 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC2.78□□□□□ -1.96
HDHD3Q9BSH5 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC2.78□□□□□ -1.96
HDHD3Q9BSH5 U6.98-201ENST00000637157 84 ntBASIC2.78□□□□□ -1.96
HDHD3Q9BSH5 LINC02211-204ENST00000642024 1070 ntBASIC2.78□□□□□ -1.96
HDHD3Q9BSH5 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.78□□□□□ -1.96
HDHD3Q9BSH5 MAPK10-266ENST00000641066 6555 ntBASIC2.78□□□□□ -1.96
HDHD3Q9BSH5 AF127577.6-201ENST00000623352 2191 ntBASIC2.78□□□□□ -1.96
HDHD3Q9BSH5 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC2.78□□□□□ -1.96
HDHD3Q9BSH5 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC2.78□□□□□ -1.96
HDHD3Q9BSH5 ZNF37BP-203ENST00000452306 1352 ntBASIC2.77□□□□□ -1.97
HDHD3Q9BSH5 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
HDHD3Q9BSH5 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
HDHD3Q9BSH5 ZNF542P-204ENST00000482727 1305 ntBASIC2.77□□□□□ -1.97
HDHD3Q9BSH5 USP8P1-201ENST00000494673 3183 ntBASIC2.77□□□□□ -1.97
HDHD3Q9BSH5 MIR148B-201ENST00000362252 99 ntBASIC2.77□□□□□ -1.97
HDHD3Q9BSH5 RNU6-1066P-201ENST00000363573 105 ntBASIC2.77□□□□□ -1.97
HDHD3Q9BSH5 RNU6-657P-201ENST00000383904 107 ntBASIC2.77□□□□□ -1.97
HDHD3Q9BSH5 RNU6-1300P-201ENST00000391046 108 ntBASIC2.77□□□□□ -1.97
HDHD3Q9BSH5 AL355379.1-201ENST00000405542 640 ntBASIC2.77□□□□□ -1.97
HDHD3Q9BSH5 RNU4-22P-201ENST00000411058 166 ntBASIC2.77□□□□□ -1.97
HDHD3Q9BSH5 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC2.77□□□□□ -1.97
HDHD3Q9BSH5 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC2.77□□□□□ -1.97
HDHD3Q9BSH5 AC007435.1-201ENST00000421086 415 ntBASIC2.77□□□□□ -1.97
HDHD3Q9BSH5 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC2.77□□□□□ -1.97
HDHD3Q9BSH5 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
HDHD3Q9BSH5 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC2.77□□□□□ -1.97
HDHD3Q9BSH5 AC073063.1-201ENST00000434352 607 ntBASIC2.77□□□□□ -1.97
HDHD3Q9BSH5 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC2.77□□□□□ -1.97
HDHD3Q9BSH5 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC2.77□□□□□ -1.97
HDHD3Q9BSH5 HMGB3P6-201ENST00000444896 598 ntBASIC2.77□□□□□ -1.97
HDHD3Q9BSH5 AL031313.1-201ENST00000448435 256 ntBASIC2.77□□□□□ -1.97
HDHD3Q9BSH5 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
HDHD3Q9BSH5 MTCO3P2-201ENST00000457365 171 ntBASIC2.77□□□□□ -1.97
HDHD3Q9BSH5 PABPC1P3-201ENST00000469174 459 ntBASIC2.77□□□□□ -1.97
HDHD3Q9BSH5 AC078785.3-201ENST00000476607 425 ntBASIC2.77□□□□□ -1.97
HDHD3Q9BSH5 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC2.77□□□□□ -1.97
HDHD3Q9BSH5 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC2.77□□□□□ -1.97
HDHD3Q9BSH5 AC079203.1-201ENST00000487972 404 ntBASIC2.77□□□□□ -1.97
HDHD3Q9BSH5 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC2.77□□□□□ -1.97
HDHD3Q9BSH5 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC2.77□□□□□ -1.97
HDHD3Q9BSH5 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC2.77□□□□□ -1.97
HDHD3Q9BSH5 AC114322.1-201ENST00000506771 926 ntBASIC2.77□□□□□ -1.97
HDHD3Q9BSH5 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC2.77□□□□□ -1.97
HDHD3Q9BSH5 AC027309.2-201ENST00000520566 192 ntBASIC2.77□□□□□ -1.97
HDHD3Q9BSH5 AC093331.1-201ENST00000521474 169 ntBASIC2.77□□□□□ -1.97
HDHD3Q9BSH5 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC2.77□□□□□ -1.97
HDHD3Q9BSH5 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC2.77□□□□□ -1.97
HDHD3Q9BSH5 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC2.77□□□□□ -1.97
HDHD3Q9BSH5 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC2.77□□□□□ -1.97
HDHD3Q9BSH5 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC2.77□□□□□ -1.97
HDHD3Q9BSH5 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC2.77□□□□□ -1.97
HDHD3Q9BSH5 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC2.77□□□□□ -1.97
HDHD3Q9BSH5 VN1R85P-201ENST00000601587 426 ntBASIC2.77□□□□□ -1.97
HDHD3Q9BSH5 AL162713.1-201ENST00000604480 262 ntBASIC2.77□□□□□ -1.97
HDHD3Q9BSH5 ACTR3BP1-201ENST00000605584 1247 ntBASIC2.77□□□□□ -1.97
HDHD3Q9BSH5 AC069545.1-201ENST00000605671 358 ntBASIC2.77□□□□□ -1.97
HDHD3Q9BSH5 RNU4-5P-201ENST00000607255 135 ntBASIC2.77□□□□□ -1.97
HDHD3Q9BSH5 MIR7851-201ENST00000610611 160 ntBASIC2.77□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 132.1 ms