Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 RNU6-517P-201ENST00000384362 110 ntBASIC4.36□□□□□ -1.71
VPS50Q96JG6 RNU6-809P-201ENST00000384461 107 ntBASIC4.36□□□□□ -1.71
VPS50Q96JG6 Y_RNA.516-201ENST00000384541 124 ntBASIC4.36□□□□□ -1.71
VPS50Q96JG6 CYP4F29P-201ENST00000420685 446 ntBASIC4.36□□□□□ -1.71
VPS50Q96JG6 RAD23BP1-201ENST00000421404 1227 ntBASIC4.36□□□□□ -1.71
VPS50Q96JG6 RPL18P10-201ENST00000425606 538 ntBASIC4.36□□□□□ -1.71
VPS50Q96JG6 AL035410.1-201ENST00000427409 427 ntBASIC4.36□□□□□ -1.71
VPS50Q96JG6 NPM1P34-201ENST00000428821 893 ntBASIC4.36□□□□□ -1.71
VPS50Q96JG6 RPL21P91-201ENST00000429231 479 ntBASIC4.36□□□□□ -1.71
VPS50Q96JG6 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC4.36□□□□□ -1.71
VPS50Q96JG6 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.36□□□□□ -1.71
VPS50Q96JG6 ATP6V0E1P2-201ENST00000441771 245 ntBASIC4.36□□□□□ -1.71
VPS50Q96JG6 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC4.36□□□□□ -1.71
VPS50Q96JG6 AC002381.1-201ENST00000447049 280 ntBASIC4.36□□□□□ -1.71
VPS50Q96JG6 ARPC3P5-201ENST00000448802 534 ntBASIC4.36□□□□□ -1.71
VPS50Q96JG6 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC4.36□□□□□ -1.71
VPS50Q96JG6 USP9YP34-201ENST00000453983 808 ntBASIC4.36□□□□□ -1.71
VPS50Q96JG6 SUMO2P2-201ENST00000456482 255 ntBASIC4.36□□□□□ -1.71
VPS50Q96JG6 OR6K1P-201ENST00000456766 971 ntBASIC4.36□□□□□ -1.71
VPS50Q96JG6 PLGLA-201ENST00000465668 449 ntBASIC4.36□□□□□ -1.71
VPS50Q96JG6 RPS23P7-201ENST00000466210 444 ntBASIC4.36□□□□□ -1.71
VPS50Q96JG6 RN7SL385P-201ENST00000468873 276 ntBASIC4.36□□□□□ -1.71
VPS50Q96JG6 AP000926.1-201ENST00000479573 241 ntBASIC4.36□□□□□ -1.71
VPS50Q96JG6 RPS26P15-201ENST00000488067 348 ntBASIC4.36□□□□□ -1.71
VPS50Q96JG6 CDC42P4-201ENST00000510507 563 ntBASIC4.36□□□□□ -1.71
VPS50Q96JG6 AC034159.1-201ENST00000513885 583 ntBASIC4.36□□□□□ -1.71
VPS50Q96JG6 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC4.36□□□□□ -1.71
VPS50Q96JG6 MTND1P5-201ENST00000517906 940 ntBASIC4.36□□□□□ -1.71
VPS50Q96JG6 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC4.36□□□□□ -1.71
VPS50Q96JG6 DUXAP2-201ENST00000519198 589 ntBASIC4.36□□□□□ -1.71
VPS50Q96JG6 IFITM8P-201ENST00000522529 394 ntBASIC4.36□□□□□ -1.71
VPS50Q96JG6 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC4.36□□□□□ -1.71
VPS50Q96JG6 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC4.36□□□□□ -1.71
VPS50Q96JG6 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC4.36□□□□□ -1.71
VPS50Q96JG6 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC4.36□□□□□ -1.71
VPS50Q96JG6 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC4.36□□□□□ -1.71
VPS50Q96JG6 MIR4715-201ENST00000584117 79 ntBASIC4.36□□□□□ -1.71
VPS50Q96JG6 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC4.36□□□□□ -1.71
VPS50Q96JG6 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC4.36□□□□□ -1.71
VPS50Q96JG6 AP003117.2-201ENST00000606010 545 ntBASIC4.36□□□□□ -1.71
VPS50Q96JG6 AC108747.1-201ENST00000609508 535 ntBASIC4.36□□□□□ -1.71
VPS50Q96JG6 AC087241.4-201ENST00000612441 480 ntBASIC4.36□□□□□ -1.71
VPS50Q96JG6 DLEU1_2.1-201ENST00000617920 342 ntBASIC4.36□□□□□ -1.71
VPS50Q96JG6 CRYM-AS1-204ENST00000637983 556 ntBASIC4.36□□□□□ -1.71
VPS50Q96JG6 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC4.36□□□□□ -1.71
VPS50Q96JG6 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC4.36□□□□□ -1.71
VPS50Q96JG6 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
VPS50Q96JG6 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.36□□□□□ -1.71
VPS50Q96JG6 AC097504.1-201ENST00000515103 2415 ntBASIC4.36□□□□□ -1.71
VPS50Q96JG6 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.36□□□□□ -1.71
VPS50Q96JG6 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.36□□□□□ -1.71
VPS50Q96JG6 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.36□□□□□ -1.71
VPS50Q96JG6 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
VPS50Q96JG6 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
VPS50Q96JG6 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
VPS50Q96JG6 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
VPS50Q96JG6 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
VPS50Q96JG6 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC4.36□□□□□ -1.71
VPS50Q96JG6 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.36□□□□□ -1.71
VPS50Q96JG6 AC006378.2-201ENST00000623178 2476 ntBASIC4.35□□□□□ -1.71
VPS50Q96JG6 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
VPS50Q96JG6 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
VPS50Q96JG6 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
VPS50Q96JG6 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
VPS50Q96JG6 OR11H4-201ENST00000315409 1082 ntBASIC4.35□□□□□ -1.71
VPS50Q96JG6 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
VPS50Q96JG6 SSXP10-201ENST00000402595 565 ntBASIC4.35□□□□□ -1.71
VPS50Q96JG6 AL024474.1-201ENST00000404655 591 ntBASIC4.35□□□□□ -1.71
VPS50Q96JG6 TANK-206ENST00000406287 875 ntTSL 5 BASIC4.35□□□□□ -1.71
VPS50Q96JG6 RPL31P45-201ENST00000419532 356 ntBASIC4.35□□□□□ -1.71
VPS50Q96JG6 RPS15AP40-201ENST00000419621 391 ntBASIC4.35□□□□□ -1.71
VPS50Q96JG6 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC4.35□□□□□ -1.71
VPS50Q96JG6 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC4.35□□□□□ -1.71
VPS50Q96JG6 AC010975.2-201ENST00000427781 588 ntBASIC4.35□□□□□ -1.71
VPS50Q96JG6 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC4.35□□□□□ -1.71
VPS50Q96JG6 RSU1P2-202ENST00000437884 485 ntBASIC4.35□□□□□ -1.71
VPS50Q96JG6 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC4.35□□□□□ -1.71
VPS50Q96JG6 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC4.35□□□□□ -1.71
VPS50Q96JG6 CEACAMP6-201ENST00000452007 574 ntBASIC4.35□□□□□ -1.71
VPS50Q96JG6 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC4.35□□□□□ -1.71
VPS50Q96JG6 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
VPS50Q96JG6 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC4.35□□□□□ -1.71
VPS50Q96JG6 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC4.35□□□□□ -1.71
VPS50Q96JG6 PABPC1P3-201ENST00000469174 459 ntBASIC4.35□□□□□ -1.71
VPS50Q96JG6 AC087385.1-201ENST00000475062 312 ntBASIC4.35□□□□□ -1.71
VPS50Q96JG6 AC093267.1-201ENST00000489176 961 ntBASIC4.35□□□□□ -1.71
VPS50Q96JG6 RPL37P25-201ENST00000507308 276 ntBASIC4.35□□□□□ -1.71
VPS50Q96JG6 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC4.35□□□□□ -1.71
VPS50Q96JG6 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC4.35□□□□□ -1.71
VPS50Q96JG6 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC4.35□□□□□ -1.71
VPS50Q96JG6 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC4.35□□□□□ -1.71
VPS50Q96JG6 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC4.35□□□□□ -1.71
VPS50Q96JG6 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC4.35□□□□□ -1.71
VPS50Q96JG6 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC4.35□□□□□ -1.71
VPS50Q96JG6 AC090151.1-201ENST00000520784 730 ntBASIC4.35□□□□□ -1.71
VPS50Q96JG6 COX6CP8-201ENST00000522620 226 ntBASIC4.35□□□□□ -1.71
VPS50Q96JG6 PTP4A1P6-201ENST00000531034 478 ntBASIC4.35□□□□□ -1.71
VPS50Q96JG6 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC4.35□□□□□ -1.71
VPS50Q96JG6 AP002453.2-201ENST00000533503 320 ntBASIC4.35□□□□□ -1.71
VPS50Q96JG6 MAL2-203ENST00000534619 578 ntTSL 4 BASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 133.8 ms