Protein–RNA interactions for Protein: Q8NDV3

SMC1B, Structural maintenance of chromosomes protein 1B, humanhuman

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1BQ8NDV3 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC5.27□□□□□ -1.57
SMC1BQ8NDV3 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC5.27□□□□□ -1.57
SMC1BQ8NDV3 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC5.27□□□□□ -1.57
SMC1BQ8NDV3 OR9M1P-201ENST00000459641 921 ntBASIC5.27□□□□□ -1.57
SMC1BQ8NDV3 PLGLA-201ENST00000465668 449 ntBASIC5.27□□□□□ -1.57
SMC1BQ8NDV3 AC090453.1-201ENST00000495560 436 ntBASIC5.27□□□□□ -1.57
SMC1BQ8NDV3 AC096751.1-202ENST00000502691 1067 ntBASIC5.27□□□□□ -1.57
SMC1BQ8NDV3 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC5.27□□□□□ -1.57
SMC1BQ8NDV3 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
SMC1BQ8NDV3 MTND4LP18-201ENST00000526864 291 ntBASIC5.27□□□□□ -1.57
SMC1BQ8NDV3 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC5.27□□□□□ -1.57
SMC1BQ8NDV3 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC5.27□□□□□ -1.57
SMC1BQ8NDV3 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC5.27□□□□□ -1.57
SMC1BQ8NDV3 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC5.27□□□□□ -1.57
SMC1BQ8NDV3 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC5.27□□□□□ -1.57
SMC1BQ8NDV3 LARP7P2-201ENST00000575306 125 ntBASIC5.27□□□□□ -1.57
SMC1BQ8NDV3 AC090186.1-201ENST00000605991 572 ntBASIC5.27□□□□□ -1.57
SMC1BQ8NDV3 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC5.27□□□□□ -1.57
SMC1BQ8NDV3 AC025588.4-201ENST00000615802 908 ntBASIC5.27□□□□□ -1.57
SMC1BQ8NDV3 U6atac.1-201ENST00000616025 117 ntBASIC5.27□□□□□ -1.57
SMC1BQ8NDV3 AC108479.2-201ENST00000617314 601 ntBASIC5.27□□□□□ -1.57
SMC1BQ8NDV3 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC5.27□□□□□ -1.57
SMC1BQ8NDV3 AC068137.3-201ENST00000639191 341 ntBASIC5.27□□□□□ -1.57
SMC1BQ8NDV3 AC073869.6-201ENST00000640656 341 ntBASIC5.27□□□□□ -1.57
SMC1BQ8NDV3 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC5.27□□□□□ -1.57
SMC1BQ8NDV3 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
SMC1BQ8NDV3 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
SMC1BQ8NDV3 GDI2P1-201ENST00000429312 1336 ntBASIC5.26□□□□□ -1.57
SMC1BQ8NDV3 OR11H5P-202ENST00000641612 1325 ntBASIC5.26□□□□□ -1.57
SMC1BQ8NDV3 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
SMC1BQ8NDV3 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
SMC1BQ8NDV3 RNU6-289P-201ENST00000364093 107 ntBASIC5.26□□□□□ -1.57
SMC1BQ8NDV3 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
SMC1BQ8NDV3 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC5.26□□□□□ -1.57
SMC1BQ8NDV3 RNU6-1226P-201ENST00000384317 107 ntBASIC5.26□□□□□ -1.57
SMC1BQ8NDV3 MIR218-2-201ENST00000385006 110 ntBASIC5.26□□□□□ -1.57
SMC1BQ8NDV3 MIR3065-201ENST00000390137 79 ntBASIC5.26□□□□□ -1.57
SMC1BQ8NDV3 Y_RNA.598-201ENST00000410480 95 ntBASIC5.26□□□□□ -1.57
SMC1BQ8NDV3 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC5.26□□□□□ -1.57
SMC1BQ8NDV3 TPMTP2-201ENST00000414372 726 ntBASIC5.26□□□□□ -1.57
SMC1BQ8NDV3 AC073136.2-201ENST00000417282 849 ntBASIC5.26□□□□□ -1.57
SMC1BQ8NDV3 USP9YP13-201ENST00000417797 480 ntBASIC5.26□□□□□ -1.57
SMC1BQ8NDV3 OR2AH1P-201ENST00000425717 928 ntBASIC5.26□□□□□ -1.57
SMC1BQ8NDV3 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC5.26□□□□□ -1.57
SMC1BQ8NDV3 AC010975.2-201ENST00000427781 588 ntBASIC5.26□□□□□ -1.57
SMC1BQ8NDV3 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC5.26□□□□□ -1.57
SMC1BQ8NDV3 MTND1P4-201ENST00000435196 415 ntBASIC5.26□□□□□ -1.57
SMC1BQ8NDV3 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC5.26□□□□□ -1.57
SMC1BQ8NDV3 MTATP6P13-201ENST00000438531 667 ntBASIC5.26□□□□□ -1.57
SMC1BQ8NDV3 MTND5P14-201ENST00000441481 1267 ntBASIC5.26□□□□□ -1.57
SMC1BQ8NDV3 NOTCH2P1-201ENST00000443481 624 ntBASIC5.26□□□□□ -1.57
SMC1BQ8NDV3 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC5.26□□□□□ -1.57
SMC1BQ8NDV3 USP9YP12-201ENST00000450481 570 ntBASIC5.26□□□□□ -1.57
SMC1BQ8NDV3 ISCUP1-201ENST00000454451 448 ntBASIC5.26□□□□□ -1.57
SMC1BQ8NDV3 snoU109.1-201ENST00000459339 135 ntBASIC5.26□□□□□ -1.57
SMC1BQ8NDV3 SNORD42A-201ENST00000459584 64 ntBASIC5.26□□□□□ -1.57
SMC1BQ8NDV3 AC108941.1-201ENST00000502853 530 ntBASIC5.26□□□□□ -1.57
SMC1BQ8NDV3 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC5.26□□□□□ -1.57
SMC1BQ8NDV3 AC110792.2-201ENST00000510278 224 ntBASIC5.26□□□□□ -1.57
SMC1BQ8NDV3 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC5.26□□□□□ -1.57
SMC1BQ8NDV3 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC5.26□□□□□ -1.57
SMC1BQ8NDV3 AC026403.1-201ENST00000518938 295 ntBASIC5.26□□□□□ -1.57
SMC1BQ8NDV3 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC5.26□□□□□ -1.57
SMC1BQ8NDV3 AP002748.2-201ENST00000528671 348 ntBASIC5.26□□□□□ -1.57
SMC1BQ8NDV3 MIR5195-201ENST00000583555 115 ntBASIC5.26□□□□□ -1.57
SMC1BQ8NDV3 BNIP3P8-201ENST00000597863 560 ntBASIC5.26□□□□□ -1.57
SMC1BQ8NDV3 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC5.26□□□□□ -1.57
SMC1BQ8NDV3 AL442067.2-201ENST00000614033 363 ntBASIC5.26□□□□□ -1.57
SMC1BQ8NDV3 AC015914.2-201ENST00000618167 288 ntBASIC5.26□□□□□ -1.57
SMC1BQ8NDV3 SCARNA15.3-201ENST00000626315 122 ntBASIC5.26□□□□□ -1.57
SMC1BQ8NDV3 SCARNA4.1-201ENST00000628597 123 ntBASIC5.26□□□□□ -1.57
SMC1BQ8NDV3 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC5.26□□□□□ -1.57
SMC1BQ8NDV3 CRYM-AS1-204ENST00000637983 556 ntBASIC5.26□□□□□ -1.57
SMC1BQ8NDV3 AC006378.2-201ENST00000623178 2476 ntBASIC5.26□□□□□ -1.57
SMC1BQ8NDV3 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
SMC1BQ8NDV3 LDHAL6CP-202ENST00000550738 3224 ntBASIC5.26□□□□□ -1.57
SMC1BQ8NDV3 ELL2P4-201ENST00000446870 1376 ntBASIC5.26□□□□□ -1.57
SMC1BQ8NDV3 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC5.26□□□□□ -1.57
SMC1BQ8NDV3 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
SMC1BQ8NDV3 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC5.25□□□□□ -1.57
SMC1BQ8NDV3 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC5.25□□□□□ -1.57
SMC1BQ8NDV3 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC5.25□□□□□ -1.57
SMC1BQ8NDV3 AL022578.1-201ENST00000439330 1433 ntBASIC5.25□□□□□ -1.57
SMC1BQ8NDV3 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
SMC1BQ8NDV3 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
SMC1BQ8NDV3 RNU6-1243P-201ENST00000364028 107 ntBASIC5.25□□□□□ -1.57
SMC1BQ8NDV3 RNU6-777P-201ENST00000364265 104 ntBASIC5.25□□□□□ -1.57
SMC1BQ8NDV3 RNA5SP72-201ENST00000364442 117 ntBASIC5.25□□□□□ -1.57
SMC1BQ8NDV3 Y_RNA.516-201ENST00000384541 124 ntBASIC5.25□□□□□ -1.57
SMC1BQ8NDV3 SNORA40.3-201ENST00000390964 122 ntBASIC5.25□□□□□ -1.57
SMC1BQ8NDV3 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
SMC1BQ8NDV3 AL031679.1-201ENST00000400616 525 ntBASIC5.25□□□□□ -1.57
SMC1BQ8NDV3 DHFRP6-201ENST00000401776 268 ntBASIC5.25□□□□□ -1.57
SMC1BQ8NDV3 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC5.25□□□□□ -1.57
SMC1BQ8NDV3 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC5.25□□□□□ -1.57
SMC1BQ8NDV3 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC5.25□□□□□ -1.57
SMC1BQ8NDV3 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC5.25□□□□□ -1.57
SMC1BQ8NDV3 AC091286.1-201ENST00000431233 461 ntBASIC5.25□□□□□ -1.57
SMC1BQ8NDV3 CEACAMP1-201ENST00000434624 1035 ntBASIC5.25□□□□□ -1.57
SMC1BQ8NDV3 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC5.25□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 89.7 ms