Protein–RNA interactions for Protein: Q8IWA6

CCDC60, Coiled-coil domain-containing protein 60, humanhuman

Predicted RBP Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60Q8IWA6 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CCDC60Q8IWA6 MIR3912-201ENST00000577566 105 ntBASIC3.8□□□□□ -1.8
CCDC60Q8IWA6 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.8□□□□□ -1.8
CCDC60Q8IWA6 AL035411.2-201ENST00000604022 421 ntBASIC3.8□□□□□ -1.8
CCDC60Q8IWA6 AC021749.1-201ENST00000604322 607 ntBASIC3.8□□□□□ -1.8
CCDC60Q8IWA6 AL354976.1-201ENST00000613843 387 ntBASIC3.8□□□□□ -1.8
CCDC60Q8IWA6 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.8□□□□□ -1.8
CCDC60Q8IWA6 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC3.8□□□□□ -1.8
CCDC60Q8IWA6 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CCDC60Q8IWA6 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CCDC60Q8IWA6 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CCDC60Q8IWA6 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
CCDC60Q8IWA6 AC008725.1-201ENST00000605123 2263 ntBASIC3.79□□□□□ -1.8
CCDC60Q8IWA6 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CCDC60Q8IWA6 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CCDC60Q8IWA6 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CCDC60Q8IWA6 AL355578.1-201ENST00000607405 1328 ntBASIC3.79□□□□□ -1.8
CCDC60Q8IWA6 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
CCDC60Q8IWA6 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
CCDC60Q8IWA6 NACA3P-201ENST00000359690 648 ntBASIC3.79□□□□□ -1.8
CCDC60Q8IWA6 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
CCDC60Q8IWA6 RNU6-1066P-201ENST00000363573 105 ntBASIC3.79□□□□□ -1.8
CCDC60Q8IWA6 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC3.79□□□□□ -1.8
CCDC60Q8IWA6 RNU6-1300P-201ENST00000391046 108 ntBASIC3.79□□□□□ -1.8
CCDC60Q8IWA6 RNU6-1242P-201ENST00000391052 103 ntBASIC3.79□□□□□ -1.8
CCDC60Q8IWA6 ANAPC10P1-201ENST00000395991 556 ntBASIC3.79□□□□□ -1.8
CCDC60Q8IWA6 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC3.79□□□□□ -1.8
CCDC60Q8IWA6 Z99755.1-201ENST00000414048 380 ntBASIC3.79□□□□□ -1.8
CCDC60Q8IWA6 AL592310.1-201ENST00000414330 671 ntBASIC3.79□□□□□ -1.8
CCDC60Q8IWA6 BOLA3P4-201ENST00000418151 400 ntBASIC3.79□□□□□ -1.8
CCDC60Q8IWA6 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC3.79□□□□□ -1.8
CCDC60Q8IWA6 MTCO2P17-201ENST00000424336 677 ntBASIC3.79□□□□□ -1.8
CCDC60Q8IWA6 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.79□□□□□ -1.8
CCDC60Q8IWA6 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.79□□□□□ -1.8
CCDC60Q8IWA6 BLOC1S2P1-201ENST00000428431 301 ntBASIC3.79□□□□□ -1.8
CCDC60Q8IWA6 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC3.79□□□□□ -1.8
CCDC60Q8IWA6 RPL23AP83-201ENST00000434984 473 ntBASIC3.79□□□□□ -1.8
CCDC60Q8IWA6 GTF2IP7-202ENST00000436677 309 ntBASIC3.79□□□□□ -1.8
CCDC60Q8IWA6 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC3.79□□□□□ -1.8
CCDC60Q8IWA6 RPS3AP12-201ENST00000443616 753 ntBASIC3.79□□□□□ -1.8
CCDC60Q8IWA6 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC3.79□□□□□ -1.8
CCDC60Q8IWA6 BTF3P5-201ENST00000457252 467 ntBASIC3.79□□□□□ -1.8
CCDC60Q8IWA6 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC3.79□□□□□ -1.8
CCDC60Q8IWA6 AC021146.1-201ENST00000511202 716 ntBASIC3.79□□□□□ -1.8
CCDC60Q8IWA6 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CCDC60Q8IWA6 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC3.79□□□□□ -1.8
CCDC60Q8IWA6 AC093755.1-201ENST00000512950 1023 ntBASIC3.79□□□□□ -1.8
CCDC60Q8IWA6 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.79□□□□□ -1.8
CCDC60Q8IWA6 IGKV2D-23-201ENST00000518179 286 ntBASIC3.79□□□□□ -1.8
CCDC60Q8IWA6 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC3.79□□□□□ -1.8
CCDC60Q8IWA6 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC3.79□□□□□ -1.8
CCDC60Q8IWA6 OR4R3P-201ENST00000525084 838 ntBASIC3.79□□□□□ -1.8
CCDC60Q8IWA6 RFPL1S-203ENST00000539579 330 ntBASIC3.79□□□□□ -1.8
CCDC60Q8IWA6 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.79□□□□□ -1.8
CCDC60Q8IWA6 MTND1P24-201ENST00000552175 861 ntBASIC3.79□□□□□ -1.8
CCDC60Q8IWA6 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC3.79□□□□□ -1.8
CCDC60Q8IWA6 AC074051.3-201ENST00000570238 358 ntBASIC3.79□□□□□ -1.8
CCDC60Q8IWA6 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.79□□□□□ -1.8
CCDC60Q8IWA6 MIR3200-201ENST00000580767 85 ntBASIC3.79□□□□□ -1.8
CCDC60Q8IWA6 MIR5195-201ENST00000583555 115 ntBASIC3.79□□□□□ -1.8
CCDC60Q8IWA6 MIR4276-201ENST00000584832 70 ntBASIC3.79□□□□□ -1.8
CCDC60Q8IWA6 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.79□□□□□ -1.8
CCDC60Q8IWA6 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.79□□□□□ -1.8
CCDC60Q8IWA6 BNIP3P38-201ENST00000601117 544 ntBASIC3.79□□□□□ -1.8
CCDC60Q8IWA6 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.79□□□□□ -1.8
CCDC60Q8IWA6 RNA5SP108-201ENST00000605921 117 ntBASIC3.79□□□□□ -1.8
CCDC60Q8IWA6 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC3.79□□□□□ -1.8
CCDC60Q8IWA6 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC3.79□□□□□ -1.8
CCDC60Q8IWA6 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CCDC60Q8IWA6 MIR7112-201ENST00000616126 65 ntBASIC3.79□□□□□ -1.8
CCDC60Q8IWA6 AC006386.1-201ENST00000619436 415 ntBASIC3.79□□□□□ -1.8
CCDC60Q8IWA6 AP001002.2-201ENST00000625137 386 ntBASIC3.79□□□□□ -1.8
CCDC60Q8IWA6 MIR3651-201ENST00000630427 90 ntBASIC3.79□□□□□ -1.8
CCDC60Q8IWA6 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
CCDC60Q8IWA6 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
CCDC60Q8IWA6 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CCDC60Q8IWA6 AC095050.2-201ENST00000510748 1458 ntBASIC3.79□□□□□ -1.8
CCDC60Q8IWA6 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.79□□□□□ -1.8
CCDC60Q8IWA6 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CCDC60Q8IWA6 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.78□□□□□ -1.8
CCDC60Q8IWA6 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.78□□□□□ -1.8
CCDC60Q8IWA6 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.78□□□□□ -1.8
CCDC60Q8IWA6 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC3.78□□□□□ -1.8
CCDC60Q8IWA6 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
CCDC60Q8IWA6 RNU6-1243P-201ENST00000364028 107 ntBASIC3.78□□□□□ -1.8
CCDC60Q8IWA6 RNU6-441P-201ENST00000384545 106 ntBASIC3.78□□□□□ -1.8
CCDC60Q8IWA6 RNU6-636P-201ENST00000384598 107 ntBASIC3.78□□□□□ -1.8
CCDC60Q8IWA6 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.8
CCDC60Q8IWA6 AC073264.1-201ENST00000411508 416 ntBASIC3.78□□□□□ -1.8
CCDC60Q8IWA6 AC069218.2-201ENST00000411665 344 ntBASIC3.78□□□□□ -1.8
CCDC60Q8IWA6 RPL30P2-201ENST00000414021 291 ntBASIC3.78□□□□□ -1.8
CCDC60Q8IWA6 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC3.78□□□□□ -1.8
CCDC60Q8IWA6 AL356320.2-201ENST00000417263 507 ntBASIC3.78□□□□□ -1.8
CCDC60Q8IWA6 AC007435.1-201ENST00000421086 415 ntBASIC3.78□□□□□ -1.8
CCDC60Q8IWA6 AL513175.2-201ENST00000422071 443 ntBASIC3.78□□□□□ -1.8
CCDC60Q8IWA6 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC3.78□□□□□ -1.8
CCDC60Q8IWA6 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC3.78□□□□□ -1.8
CCDC60Q8IWA6 RPS26P56-201ENST00000444468 240 ntBASIC3.78□□□□□ -1.8
CCDC60Q8IWA6 AL357552.1-201ENST00000445254 415 ntBASIC3.78□□□□□ -1.8
CCDC60Q8IWA6 RNF148-202ENST00000447240 839 ntTSL 2 BASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 93.5 ms