Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
CKS1BP61024 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC2.13□□□□□ -2.07
CKS1BP61024 AL512283.1-201ENST00000606756 1384 ntBASIC2.12□□□□□ -2.07
CKS1BP61024 AC007342.9-201ENST00000623877 1385 ntBASIC2.12□□□□□ -2.07
CKS1BP61024 MTND5P28-201ENST00000438005 1594 ntBASIC2.12□□□□□ -2.07
CKS1BP61024 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
CKS1BP61024 RPL23AP57-201ENST00000332361 466 ntBASIC2.12□□□□□ -2.07
CKS1BP61024 RNA5SP50-201ENST00000363731 107 ntBASIC2.12□□□□□ -2.07
CKS1BP61024 DEFA7P-201ENST00000382676 285 ntBASIC2.12□□□□□ -2.07
CKS1BP61024 SNORA56-201ENST00000383966 129 ntBASIC2.12□□□□□ -2.07
CKS1BP61024 TAF9BP1-201ENST00000396646 746 ntBASIC2.12□□□□□ -2.07
CKS1BP61024 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC2.12□□□□□ -2.07
CKS1BP61024 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC2.12□□□□□ -2.07
CKS1BP61024 Z75741.2-201ENST00000417272 1167 ntBASIC2.12□□□□□ -2.07
CKS1BP61024 B3GALNT1P1-201ENST00000420569 975 ntBASIC2.12□□□□□ -2.07
CKS1BP61024 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC2.12□□□□□ -2.07
CKS1BP61024 DUTP6-201ENST00000425573 462 ntBASIC2.12□□□□□ -2.07
CKS1BP61024 ATP5JP1-201ENST00000431631 322 ntBASIC2.12□□□□□ -2.07
CKS1BP61024 AL035246.1-201ENST00000433554 1255 ntBASIC2.12□□□□□ -2.07
CKS1BP61024 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC2.12□□□□□ -2.07
CKS1BP61024 HSPD1P21-201ENST00000436541 245 ntBASIC2.12□□□□□ -2.07
CKS1BP61024 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC2.12□□□□□ -2.07
CKS1BP61024 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC2.12□□□□□ -2.07
CKS1BP61024 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.12□□□□□ -2.07
CKS1BP61024 RPL23AP70-201ENST00000483361 460 ntBASIC2.12□□□□□ -2.07
CKS1BP61024 AC023424.2-201ENST00000493479 777 ntBASIC2.12□□□□□ -2.07
CKS1BP61024 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC2.12□□□□□ -2.07
CKS1BP61024 AC092593.2-201ENST00000513866 913 ntBASIC2.12□□□□□ -2.07
CKS1BP61024 RNU1-95P-201ENST00000516357 160 ntBASIC2.12□□□□□ -2.07
CKS1BP61024 RNU1-128P-201ENST00000516704 160 ntBASIC2.12□□□□□ -2.07
CKS1BP61024 RN7SKP96-201ENST00000516948 297 ntBASIC2.12□□□□□ -2.07
CKS1BP61024 PAICSP4-201ENST00000517543 1253 ntBASIC2.12□□□□□ -2.07
CKS1BP61024 MGST1-215ENST00000540056 546 ntTSL 3 BASIC2.12□□□□□ -2.07
CKS1BP61024 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC2.12□□□□□ -2.07
CKS1BP61024 AC011611.1-201ENST00000552179 197 ntBASIC2.12□□□□□ -2.07
CKS1BP61024 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
CKS1BP61024 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC2.12□□□□□ -2.07
CKS1BP61024 AC092868.3-201ENST00000560515 784 ntBASIC2.12□□□□□ -2.07
CKS1BP61024 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC2.12□□□□□ -2.07
CKS1BP61024 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC2.12□□□□□ -2.07
CKS1BP61024 AC007448.1-201ENST00000582714 234 ntBASIC2.12□□□□□ -2.07
CKS1BP61024 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC2.12□□□□□ -2.07
CKS1BP61024 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC2.12□□□□□ -2.07
CKS1BP61024 AP004372.1-201ENST00000604842 844 ntBASIC2.12□□□□□ -2.07
CKS1BP61024 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC2.12□□□□□ -2.07
CKS1BP61024 MIR378J-201ENST00000611988 109 ntBASIC2.12□□□□□ -2.07
CKS1BP61024 AC097372.4-201ENST00000625025 466 ntBASIC2.12□□□□□ -2.07
CKS1BP61024 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
CKS1BP61024 ZNF285B-201ENST00000561698 1767 ntBASIC2.12□□□□□ -2.07
CKS1BP61024 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
CKS1BP61024 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC2.11□□□□□ -2.07
CKS1BP61024 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.11□□□□□ -2.07
CKS1BP61024 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
CKS1BP61024 IARS-201ENST00000375627 697 ntTSL 3 BASIC2.11□□□□□ -2.07
CKS1BP61024 ESD-201ENST00000378697 1079 ntTSL 5 BASIC2.11□□□□□ -2.07
CKS1BP61024 SNORA5A-201ENST00000384111 134 ntBASIC2.11□□□□□ -2.07
CKS1BP61024 AC110754.1-201ENST00000399740 601 ntBASIC2.11□□□□□ -2.07
CKS1BP61024 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
CKS1BP61024 MTATP6P31-201ENST00000406985 692 ntBASIC2.11□□□□□ -2.07
CKS1BP61024 RNA5SP56-201ENST00000410277 118 ntBASIC2.11□□□□□ -2.07
CKS1BP61024 RN7SKP159-201ENST00000410657 292 ntBASIC2.11□□□□□ -2.07
CKS1BP61024 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC2.11□□□□□ -2.07
CKS1BP61024 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC2.11□□□□□ -2.07
CKS1BP61024 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC2.11□□□□□ -2.07
CKS1BP61024 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC2.11□□□□□ -2.07
CKS1BP61024 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC2.11□□□□□ -2.07
CKS1BP61024 ATP5C1P1-201ENST00000441945 895 ntBASIC2.11□□□□□ -2.07
CKS1BP61024 RPL21P23-201ENST00000446654 460 ntBASIC2.11□□□□□ -2.07
CKS1BP61024 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC2.11□□□□□ -2.07
CKS1BP61024 RN7SL297P-201ENST00000483161 293 ntBASIC2.11□□□□□ -2.07
CKS1BP61024 AC106707.2-201ENST00000484182 374 ntBASIC2.11□□□□□ -2.07
CKS1BP61024 VN1R104P-201ENST00000505115 1009 ntBASIC2.11□□□□□ -2.07
CKS1BP61024 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC2.11□□□□□ -2.07
CKS1BP61024 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.11□□□□□ -2.07
CKS1BP61024 AC113155.1-201ENST00000511141 769 ntBASIC2.11□□□□□ -2.07
CKS1BP61024 AC008494.2-201ENST00000514544 370 ntBASIC2.11□□□□□ -2.07
CKS1BP61024 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC2.11□□□□□ -2.07
CKS1BP61024 SNORA31.8-201ENST00000516327 108 ntBASIC2.11□□□□□ -2.07
CKS1BP61024 AC067904.2-201ENST00000517322 1283 ntBASIC2.11□□□□□ -2.07
CKS1BP61024 IGLV3-17-201ENST00000519099 244 ntBASIC2.11□□□□□ -2.07
CKS1BP61024 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC2.11□□□□□ -2.07
CKS1BP61024 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.11□□□□□ -2.07
CKS1BP61024 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC2.11□□□□□ -2.07
CKS1BP61024 AC087481.2-201ENST00000565492 330 ntBASIC2.11□□□□□ -2.07
CKS1BP61024 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC2.11□□□□□ -2.07
CKS1BP61024 MIR5186-201ENST00000577504 120 ntBASIC2.11□□□□□ -2.07
CKS1BP61024 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC2.11□□□□□ -2.07
CKS1BP61024 VN1R85P-201ENST00000601587 426 ntBASIC2.11□□□□□ -2.07
CKS1BP61024 AL590410.1-201ENST00000617925 333 ntBASIC2.11□□□□□ -2.07
CKS1BP61024 AC068880.5-201ENST00000624331 290 ntBASIC2.11□□□□□ -2.07
CKS1BP61024 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC2.11□□□□□ -2.07
CKS1BP61024 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.11□□□□□ -2.07
CKS1BP61024 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
CKS1BP61024 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.11□□□□□ -2.07
CKS1BP61024 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
CKS1BP61024 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC2.1□□□□□ -2.07
CKS1BP61024 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
CKS1BP61024 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
CKS1BP61024 RNU6-263P-201ENST00000363811 107 ntBASIC2.1□□□□□ -2.07
CKS1BP61024 PRRC2CP1-201ENST00000404428 159 ntBASIC2.1□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 87.3 ms