Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
RHBDL3P58872 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
RHBDL3P58872 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
RHBDL3P58872 OSBPL9P4-201ENST00000371707 1800 ntBASIC4.77□□□□□ -1.65
RHBDL3P58872 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
RHBDL3P58872 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
RHBDL3P58872 SNORD35B-201ENST00000363660 87 ntBASIC4.77□□□□□ -1.65
RHBDL3P58872 RNU6-1074P-201ENST00000383995 104 ntBASIC4.77□□□□□ -1.65
RHBDL3P58872 RNU6-952P-201ENST00000391164 108 ntBASIC4.77□□□□□ -1.65
RHBDL3P58872 CRYBB2P1-203ENST00000415709 538 ntBASIC4.77□□□□□ -1.65
RHBDL3P58872 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
RHBDL3P58872 TXNL1P1-201ENST00000429528 554 ntBASIC4.77□□□□□ -1.65
RHBDL3P58872 AC018644.1-201ENST00000429934 551 ntBASIC4.77□□□□□ -1.65
RHBDL3P58872 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC4.77□□□□□ -1.65
RHBDL3P58872 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC4.77□□□□□ -1.65
RHBDL3P58872 HMGN2P7-201ENST00000456186 273 ntBASIC4.77□□□□□ -1.65
RHBDL3P58872 CEACAMP4-201ENST00000457676 421 ntBASIC4.77□□□□□ -1.65
RHBDL3P58872 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC4.77□□□□□ -1.65
RHBDL3P58872 RPL23AP55-201ENST00000498163 452 ntBASIC4.77□□□□□ -1.65
RHBDL3P58872 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC4.77□□□□□ -1.65
RHBDL3P58872 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC4.77□□□□□ -1.65
RHBDL3P58872 MLLT10P2-201ENST00000506434 249 ntBASIC4.77□□□□□ -1.65
RHBDL3P58872 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
RHBDL3P58872 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC4.77□□□□□ -1.65
RHBDL3P58872 AC112673.1-201ENST00000513168 575 ntBASIC4.77□□□□□ -1.65
RHBDL3P58872 RNA5SP179-201ENST00000517284 121 ntBASIC4.77□□□□□ -1.65
RHBDL3P58872 UBTFL10-201ENST00000528532 562 ntBASIC4.77□□□□□ -1.65
RHBDL3P58872 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC4.77□□□□□ -1.65
RHBDL3P58872 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC4.77□□□□□ -1.65
RHBDL3P58872 UBE2NP1-201ENST00000545592 458 ntBASIC4.77□□□□□ -1.65
RHBDL3P58872 CR383656.7-201ENST00000548164 174 ntBASIC4.77□□□□□ -1.65
RHBDL3P58872 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.77□□□□□ -1.65
RHBDL3P58872 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC4.77□□□□□ -1.65
RHBDL3P58872 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC4.77□□□□□ -1.65
RHBDL3P58872 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC4.77□□□□□ -1.65
RHBDL3P58872 MIR3690-201ENST00000580266 75 ntBASIC4.77□□□□□ -1.65
RHBDL3P58872 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC4.77□□□□□ -1.65
RHBDL3P58872 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC4.77□□□□□ -1.65
RHBDL3P58872 MIR432-201ENST00000606207 94 ntBASIC4.77□□□□□ -1.65
RHBDL3P58872 AL590240.3-201ENST00000621416 943 ntBASIC4.77□□□□□ -1.65
RHBDL3P58872 AL360181.4-201ENST00000621752 134 ntBASIC4.77□□□□□ -1.65
RHBDL3P58872 AC104454.1-201ENST00000421341 1401 ntBASIC4.77□□□□□ -1.65
RHBDL3P58872 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.77□□□□□ -1.65
RHBDL3P58872 OTUD4P1-201ENST00000237841 3067 ntBASIC4.77□□□□□ -1.65
RHBDL3P58872 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
RHBDL3P58872 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
RHBDL3P58872 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
RHBDL3P58872 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC4.77□□□□□ -1.65
RHBDL3P58872 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC4.77□□□□□ -1.65
RHBDL3P58872 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
RHBDL3P58872 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC4.76□□□□□ -1.65
RHBDL3P58872 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
RHBDL3P58872 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.76□□□□□ -1.65
RHBDL3P58872 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
RHBDL3P58872 OR5H2-201ENST00000355273 945 ntBASIC4.76□□□□□ -1.65
RHBDL3P58872 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
RHBDL3P58872 MIR30B-201ENST00000384850 88 ntBASIC4.76□□□□□ -1.65
RHBDL3P58872 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
RHBDL3P58872 RAC1P3-201ENST00000416129 580 ntBASIC4.76□□□□□ -1.65
RHBDL3P58872 AC127526.1-201ENST00000417526 366 ntBASIC4.76□□□□□ -1.65
RHBDL3P58872 AC093698.1-201ENST00000423843 571 ntBASIC4.76□□□□□ -1.65
RHBDL3P58872 AL022400.1-201ENST00000423946 935 ntBASIC4.76□□□□□ -1.65
RHBDL3P58872 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC4.76□□□□□ -1.65
RHBDL3P58872 AL008629.1-201ENST00000438615 184 ntBASIC4.76□□□□□ -1.65
RHBDL3P58872 MTND5P14-201ENST00000441481 1267 ntBASIC4.76□□□□□ -1.65
RHBDL3P58872 NOTCH2P1-201ENST00000443481 624 ntBASIC4.76□□□□□ -1.65
RHBDL3P58872 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC4.76□□□□□ -1.65
RHBDL3P58872 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC4.76□□□□□ -1.65
RHBDL3P58872 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC4.76□□□□□ -1.65
RHBDL3P58872 AC104978.1-201ENST00000449387 391 ntBASIC4.76□□□□□ -1.65
RHBDL3P58872 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC4.76□□□□□ -1.65
RHBDL3P58872 NANOGP10-201ENST00000453325 895 ntBASIC4.76□□□□□ -1.65
RHBDL3P58872 BX322784.1-201ENST00000455793 1077 ntBASIC4.76□□□□□ -1.65
RHBDL3P58872 RPS4XP13-201ENST00000483219 789 ntBASIC4.76□□□□□ -1.65
RHBDL3P58872 AC021146.5-201ENST00000503544 545 ntBASIC4.76□□□□□ -1.65
RHBDL3P58872 AC093677.1-201ENST00000514414 678 ntBASIC4.76□□□□□ -1.65
RHBDL3P58872 MTCO2P32-201ENST00000514865 403 ntBASIC4.76□□□□□ -1.65
RHBDL3P58872 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC4.76□□□□□ -1.65
RHBDL3P58872 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC4.76□□□□□ -1.65
RHBDL3P58872 IGKV2D-19-201ENST00000523346 262 ntBASIC4.76□□□□□ -1.65
RHBDL3P58872 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC4.76□□□□□ -1.65
RHBDL3P58872 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.76□□□□□ -1.65
RHBDL3P58872 AC087481.2-201ENST00000565492 330 ntBASIC4.76□□□□□ -1.65
RHBDL3P58872 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC4.76□□□□□ -1.65
RHBDL3P58872 AC006539.2-201ENST00000601729 572 ntBASIC4.76□□□□□ -1.65
RHBDL3P58872 AC012669.1-201ENST00000603209 283 ntBASIC4.76□□□□□ -1.65
RHBDL3P58872 TUG1_1.1-201ENST00000610654 145 ntBASIC4.76□□□□□ -1.65
RHBDL3P58872 AC087683.2-201ENST00000611384 326 ntBASIC4.76□□□□□ -1.65
RHBDL3P58872 AC079395.3-201ENST00000615161 484 ntBASIC4.76□□□□□ -1.65
RHBDL3P58872 DLEU1_2.1-201ENST00000617920 342 ntBASIC4.76□□□□□ -1.65
RHBDL3P58872 CCT7-217ENST00000626868 249 ntTSL 5 BASIC4.76□□□□□ -1.65
RHBDL3P58872 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.76□□□□□ -1.65
RHBDL3P58872 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
RHBDL3P58872 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
RHBDL3P58872 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.76□□□□□ -1.65
RHBDL3P58872 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
RHBDL3P58872 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
RHBDL3P58872 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
RHBDL3P58872 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC4.75□□□□□ -1.65
RHBDL3P58872 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 73.7 ms