Protein–RNA interactions for Protein: P41235

HNF4A, Hepatocyte nuclear factor 4-alpha, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4AP41235 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
HNF4AP41235 Z99496.1-201ENST00000469424 1477 ntBASIC3.79□□□□□ -1.8
HNF4AP41235 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
HNF4AP41235 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
HNF4AP41235 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
HNF4AP41235 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
HNF4AP41235 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.78□□□□□ -1.8
HNF4AP41235 RNU6-1074P-201ENST00000383995 104 ntBASIC3.78□□□□□ -1.8
HNF4AP41235 Z98941.1-201ENST00000407764 100 ntBASIC3.78□□□□□ -1.8
HNF4AP41235 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC3.78□□□□□ -1.8
HNF4AP41235 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.78□□□□□ -1.8
HNF4AP41235 AC012065.2-201ENST00000421295 375 ntBASIC3.78□□□□□ -1.8
HNF4AP41235 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC3.78□□□□□ -1.8
HNF4AP41235 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC3.78□□□□□ -1.8
HNF4AP41235 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC3.78□□□□□ -1.8
HNF4AP41235 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC3.78□□□□□ -1.8
HNF4AP41235 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC3.78□□□□□ -1.8
HNF4AP41235 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC3.78□□□□□ -1.8
HNF4AP41235 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC3.78□□□□□ -1.8
HNF4AP41235 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.78□□□□□ -1.8
HNF4AP41235 RNF148-202ENST00000447240 839 ntTSL 2 BASIC3.78□□□□□ -1.8
HNF4AP41235 NUTF2P7-201ENST00000453086 375 ntBASIC3.78□□□□□ -1.8
HNF4AP41235 USP9YP25-201ENST00000457708 443 ntBASIC3.78□□□□□ -1.8
HNF4AP41235 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC3.78□□□□□ -1.8
HNF4AP41235 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
HNF4AP41235 AC012181.1-201ENST00000479895 423 ntBASIC3.78□□□□□ -1.8
HNF4AP41235 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC3.78□□□□□ -1.8
HNF4AP41235 MLLT10P2-201ENST00000506434 249 ntBASIC3.78□□□□□ -1.8
HNF4AP41235 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
HNF4AP41235 AC087369.1-201ENST00000520775 996 ntBASIC3.78□□□□□ -1.8
HNF4AP41235 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC3.78□□□□□ -1.8
HNF4AP41235 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC3.78□□□□□ -1.8
HNF4AP41235 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC3.78□□□□□ -1.8
HNF4AP41235 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.8
HNF4AP41235 AP000619.3-201ENST00000535634 1127 ntBASIC3.78□□□□□ -1.8
HNF4AP41235 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC3.78□□□□□ -1.8
HNF4AP41235 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC3.78□□□□□ -1.8
HNF4AP41235 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC3.78□□□□□ -1.8
HNF4AP41235 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.78□□□□□ -1.8
HNF4AP41235 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.78□□□□□ -1.8
HNF4AP41235 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC3.78□□□□□ -1.8
HNF4AP41235 MTND3P13-201ENST00000574391 343 ntBASIC3.78□□□□□ -1.8
HNF4AP41235 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC3.78□□□□□ -1.8
HNF4AP41235 AC091057.2-201ENST00000602594 792 ntBASIC3.78□□□□□ -1.8
HNF4AP41235 AL606490.9-201ENST00000603331 271 ntBASIC3.78□□□□□ -1.8
HNF4AP41235 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC3.78□□□□□ -1.8
HNF4AP41235 AC092653.1-201ENST00000608509 531 ntBASIC3.78□□□□□ -1.8
HNF4AP41235 MIR6875-201ENST00000617506 72 ntBASIC3.78□□□□□ -1.8
HNF4AP41235 AP003485.2-201ENST00000623636 610 ntBASIC3.78□□□□□ -1.8
HNF4AP41235 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC3.78□□□□□ -1.8
HNF4AP41235 RNA5SP196-201ENST00000625967 102 ntBASIC3.78□□□□□ -1.8
HNF4AP41235 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC3.78□□□□□ -1.8
HNF4AP41235 LINC02211-204ENST00000642024 1070 ntBASIC3.78□□□□□ -1.8
HNF4AP41235 ZNF876P-202ENST00000398732 1485 ntBASIC3.78□□□□□ -1.8
HNF4AP41235 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
HNF4AP41235 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.81
HNF4AP41235 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.77□□□□□ -1.81
HNF4AP41235 NCAPGP1-201ENST00000505112 1814 ntBASIC3.77□□□□□ -1.81
HNF4AP41235 RPS4XP5-202ENST00000449995 1334 ntBASIC3.77□□□□□ -1.81
HNF4AP41235 NF1-214ENST00000490416 1329 ntTSL 3 BASIC3.77□□□□□ -1.81
HNF4AP41235 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
HNF4AP41235 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
HNF4AP41235 RPL7P26-201ENST00000333817 754 ntBASIC3.77□□□□□ -1.81
HNF4AP41235 RN7SKP227-201ENST00000364445 330 ntBASIC3.77□□□□□ -1.81
HNF4AP41235 RNU6-707P-201ENST00000364647 95 ntBASIC3.77□□□□□ -1.81
HNF4AP41235 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC3.77□□□□□ -1.81
HNF4AP41235 SNORD3H-201ENST00000384486 214 ntBASIC3.77□□□□□ -1.81
HNF4AP41235 CYCSP45-201ENST00000402289 315 ntBASIC3.77□□□□□ -1.81
HNF4AP41235 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC3.77□□□□□ -1.81
HNF4AP41235 ZNF736P2Y-201ENST00000416040 1279 ntBASIC3.77□□□□□ -1.81
HNF4AP41235 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC3.77□□□□□ -1.81
HNF4AP41235 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC3.77□□□□□ -1.81
HNF4AP41235 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC3.77□□□□□ -1.81
HNF4AP41235 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC3.77□□□□□ -1.81
HNF4AP41235 NEK4P1-201ENST00000433383 879 ntBASIC3.77□□□□□ -1.81
HNF4AP41235 MTND4LP10-201ENST00000435146 291 ntBASIC3.77□□□□□ -1.81
HNF4AP41235 RPS17P13-201ENST00000448974 407 ntBASIC3.77□□□□□ -1.81
HNF4AP41235 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC3.77□□□□□ -1.81
HNF4AP41235 AL445669.2-201ENST00000454425 421 ntBASIC3.77□□□□□ -1.81
HNF4AP41235 RPL7L1P8-201ENST00000469911 741 ntBASIC3.77□□□□□ -1.81
HNF4AP41235 AC091951.3-201ENST00000504093 246 ntBASIC3.77□□□□□ -1.81
HNF4AP41235 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC3.77□□□□□ -1.81
HNF4AP41235 AC006390.1-201ENST00000508068 283 ntBASIC3.77□□□□□ -1.81
HNF4AP41235 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.77□□□□□ -1.81
HNF4AP41235 FTH1P21-201ENST00000512179 511 ntBASIC3.77□□□□□ -1.81
HNF4AP41235 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC3.77□□□□□ -1.81
HNF4AP41235 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC3.77□□□□□ -1.81
HNF4AP41235 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC3.77□□□□□ -1.81
HNF4AP41235 AL139174.1-201ENST00000531489 886 ntBASIC3.77□□□□□ -1.81
HNF4AP41235 MRPS36P5-201ENST00000551909 298 ntBASIC3.77□□□□□ -1.81
HNF4AP41235 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC3.77□□□□□ -1.81
HNF4AP41235 MIR4474-201ENST00000579189 78 ntBASIC3.77□□□□□ -1.81
HNF4AP41235 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.77□□□□□ -1.81
HNF4AP41235 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC3.77□□□□□ -1.81
HNF4AP41235 RPL23AP92-201ENST00000603609 255 ntBASIC3.77□□□□□ -1.81
HNF4AP41235 AC067959.1-201ENST00000604334 379 ntBASIC3.77□□□□□ -1.81
HNF4AP41235 AL355810.1-201ENST00000614629 552 ntBASIC3.77□□□□□ -1.81
HNF4AP41235 AL731566.2-201ENST00000618971 317 ntBASIC3.77□□□□□ -1.81
HNF4AP41235 AC095031.1-201ENST00000623685 672 ntBASIC3.77□□□□□ -1.81
HNF4AP41235 AC009039.2-201ENST00000624524 529 ntBASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms